RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 GID8Q9NWU2 228 aa13.96□□□□□ -0.17
CTDSP1-204ENST00000443891 CGGBP1Q9UFW8 167 aaPredicted RBP13.96□□□□□ -0.17
CTDSP1-204ENST00000443891 FZR1Q9UM11 496 aa13.96□□□□□ -0.17
CTDSP1-204ENST00000443891 SVEP1Q4LDE5 3571 aa13.95□□□□□ -0.18
CTDSP1-204ENST00000443891 H3BSA7 217 aa13.95□□□□□ -0.18
CTDSP1-204ENST00000443891 PPIHO43447 177 aaKnown RBP13.95□□□□□ -0.18
CTDSP1-204ENST00000443891 LCKP06239 509 aa13.95□□□□□ -0.18
CTDSP1-204ENST00000443891 FAM157BP0CG42 384 aa13.95□□□□□ -0.18
CTDSP1-204ENST00000443891 GAAP10253 952 aa13.95□□□□□ -0.18
CTDSP1-204ENST00000443891 LIPAP38571 399 aa13.95□□□□□ -0.18
CTDSP1-204ENST00000443891 AQP2P41181 271 aa13.95□□□□□ -0.18
CTDSP1-204ENST00000443891 MYBPC1Q00872 1141 aa13.95□□□□□ -0.18
CTDSP1-204ENST00000443891 RUNX1T1Q06455 604 aa13.95□□□□□ -0.18
CTDSP1-204ENST00000443891 RABL3Q5HYI8 236 aa13.95□□□□□ -0.18
CTDSP1-204ENST00000443891 THEM4Q5T1C6 240 aa13.95□□□□□ -0.18
CTDSP1-204ENST00000443891 TMEM255BQ8WV15 326 aa13.95□□□□□ -0.18
CTDSP1-204ENST00000443891 YIPF5Q969M3 257 aa13.95□□□□□ -0.18
CTDSP1-204ENST00000443891 ZNF583Q96ND8 569 aa13.95□□□□□ -0.18
CTDSP1-204ENST00000443891 CCNB1IP1Q9NPC3 277 aa13.95□□□□□ -0.18
CTDSP1-204ENST00000443891 HIF1ANQ9NWT6 349 aa13.95□□□□□ -0.18
CTDSP1-204ENST00000443891 EIF3KQ9UBQ5 218 aaKnown RBP13.95□□□□□ -0.18
CTDSP1-204ENST00000443891 HIF3AQ9Y2N7 669 aa13.95□□□□□ -0.18
CTDSP1-204ENST00000443891 FXYD1O00168 92 aa13.94□□□□□ -0.18
CTDSP1-204ENST00000443891 MRASO14807 208 aa13.94□□□□□ -0.18
CTDSP1-204ENST00000443891 SLC22A2O15244 555 aa13.94□□□□□ -0.18
CTDSP1-204ENST00000443891 NCR1O76036 304 aa13.94□□□□□ -0.18
CTDSP1-204ENST00000443891 DRD4P21917 467 aa13.94□□□□□ -0.18
CTDSP1-204ENST00000443891 KDELR2P33947 212 aa13.94□□□□□ -0.18
CTDSP1-204ENST00000443891 GUCA1AP43080 201 aaPredicted RBP13.94□□□□□ -0.18
CTDSP1-204ENST00000443891 LMO4P61968 165 aa13.94□□□□□ -0.18
CTDSP1-204ENST00000443891 PIN1Q13526 163 aaPredicted RBP13.94□□□□□ -0.18
CTDSP1-204ENST00000443891 ZNF718Q3SXZ3 478 aa13.94□□□□□ -0.18
CTDSP1-204ENST00000443891 FAM27BQ5VT28 67 aa13.94□□□□□ -0.18
CTDSP1-204ENST00000443891 ALDH16A1Q8IZ83 802 aa13.94□□□□□ -0.18
CTDSP1-204ENST00000443891 PAQR4Q8N4S7 273 aaPredicted RBP13.94□□□□□ -0.18
CTDSP1-204ENST00000443891 SYT14Q8NB59 555 aa13.94□□□□□ -0.18
CTDSP1-204ENST00000443891 CPEB3Q8NE35 698 aaKnown RBP13.94□□□□□ -0.18
CTDSP1-204ENST00000443891 PFN4Q8NHR9 129 aa13.94□□□□□ -0.18
CTDSP1-204ENST00000443891 C10orf82Q8WW14 230 aa13.94□□□□□ -0.18
CTDSP1-204ENST00000443891 LZICQ8WZA0 190 aa13.94□□□□□ -0.18
CTDSP1-204ENST00000443891 NMD3Q96D46 503 aaKnown RBP13.94□□□□□ -0.18
CTDSP1-204ENST00000443891 RAB39BQ96DA2 213 aa13.94□□□□□ -0.18
CTDSP1-204ENST00000443891 RBP7Q96R05 134 aa13.94□□□□□ -0.18
CTDSP1-204ENST00000443891 TMEM120AQ9BXJ8 343 aa13.94□□□□□ -0.18
CTDSP1-204ENST00000443891 CYSLTR2Q9NS75 346 aa13.94□□□□□ -0.18
CTDSP1-204ENST00000443891 DECR2Q9NUI1 292 aa13.94□□□□□ -0.18
CTDSP1-204ENST00000443891 IGHV1-69-2A0A0G2JMI3 117 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 FAM220BPB1ANY3 271 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 ICMTO60725 284 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 CLPTM1O96005 669 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 IGHMP01871 453 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 TUBG1P23258 451 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 STOMP27105 288 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 GCH1P30793 250 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 MAGEB1P43366 347 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 ARFIP2P53365 341 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 PCBD1P61457 104 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 SELENOWP63302 87 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 SLC3A1Q07837 685 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 KLF10Q13118 480 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 ALG10Q5BKT4 473 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 PABPC1L2AQ5JQF8 200 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 ACSM5Q6NUN0 579 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 ARPINQ7Z6K5 226 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 SYT9Q86SS6 491 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 LRRC18Q8N456 261 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 OR1J1Q8NGS3 322 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 NABP1Q96AH0 204 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 TIMD4Q96H15 378 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 POM121L2Q96KW2 1035 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 PRRC1Q96M27 445 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 TUBG2Q9NRH3 451 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 C20orf141Q9NUB4 165 aa13.93□□□□□ -0.18
CTDSP1-204ENST00000443891 A6NIZ1 184 aa13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 FAM157AC9JC47 383 aa13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 ADH4P08319 380 aa13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 CST2P09228 141 aa13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 CCL2P13500 99 aa13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 GDI2P50395 445 aaKnown RBP13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 RAP1BP61224 184 aa13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 RPL27P61353 136 aaKnown RBP13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 RAP1AP62834 184 aa13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 CCL8P80075 99 aa13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 CD47Q08722 323 aa13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 HFEQ30201 348 aa13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 CYBRD1Q53TN4 286 aa13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 ZMAT1Q5H9K5 638 aa13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 MBNL2Q5VZF2 373 aaKnown RBP13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 SHQ1Q6PI26 577 aaKnown RBP13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 SLC25A47Q6Q0C1 308 aa13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 ARL9Q6T311 187 aa13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 RINLQ6ZS11 566 aa13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 USP43Q70EL4 1123 aa13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 MEX3DQ86XN8 651 aaKnown RBP13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 RNF113BQ8IZP6 322 aaKnown RBP13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 FAM156AQ8NDB6 213 aa13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 OR2T12Q8NG77 320 aa13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 MOSPD2Q8NHP6 518 aa13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 HDAC2Q92769 488 aaKnown RBP13.92□□□□□ -0.18
CTDSP1-204ENST00000443891 RAB1CQ92928 201 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms