RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 ZNF75AQ96N20 296 aa13.97□□□□□ -0.17
USP39-205ENST00000442708 TMEM204Q9BSN7 226 aa13.97□□□□□ -0.17
USP39-205ENST00000442708 NUAK2Q9H093 628 aa13.97□□□□□ -0.17
USP39-205ENST00000442708 CLEC4MQ9H2X3 399 aaPredicted RBP13.97□□□□□ -0.17
USP39-205ENST00000442708 OBP2BQ9NPH6 170 aa13.97□□□□□ -0.17
USP39-205ENST00000442708 PAPOLBQ9NRJ5 636 aaKnown RBP13.97□□□□□ -0.17
USP39-205ENST00000442708 KIF17Q9P2E2 1029 aa13.97□□□□□ -0.17
USP39-205ENST00000442708 RAI1Q7Z5J4 1906 aaPredicted RBP13.97□□□□□ -0.17
USP39-205ENST00000442708 POLQO75417 2590 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 HEATR1Q9H583 2144 aaKnown RBP13.96□□□□□ -0.17
USP39-205ENST00000442708 IGHV1-18A0A0C4DH31 117 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 M0R1B8 84 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 GOSR1O95249 250 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 MPZL1O95297 269 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 GPANK1O95872 356 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 WNT11O96014 354 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 OR8G3PP0DMU2 310 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 CD79AP11912 226 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 EPHA2P29317 976 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 GIPRP48546 466 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 PPP2R2BQ00005 443 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 CDK5Q00535 292 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 GINS1Q14691 196 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 SGCAQ16586 387 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 TMEM236Q5W0B7 351 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 JAZF1Q86VZ6 243 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 C10orf67Q8IYJ2 551 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 OR6V1Q8N148 313 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 LRRC18Q8N456 261 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 SLC37A3Q8NCC5 494 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 OR2T33Q8NG76 320 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 LILRB1Q8NHL6 650 aaPredicted RBP13.96□□□□□ -0.17
USP39-205ENST00000442708 TEX47Q8TBZ9 253 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 NRGNQ92686 78 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 CIB1Q99828 191 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 RERGLQ9H628 205 aa13.96□□□□□ -0.17
USP39-205ENST00000442708 CRNNQ9UBG3 495 aaPredicted RBP13.96□□□□□ -0.17
USP39-205ENST00000442708 COA3Q9Y2R0 106 aaPredicted RBP13.96□□□□□ -0.17
USP39-205ENST00000442708 IGLV1-36A0A0B4J1U3 117 aa13.95□□□□□ -0.18
USP39-205ENST00000442708 A0A1W2PPL8 197 aa13.95□□□□□ -0.18
USP39-205ENST00000442708 IGLV1-44P01699 117 aa13.95□□□□□ -0.18
USP39-205ENST00000442708 NR2C1P13056 603 aa13.95□□□□□ -0.18
USP39-205ENST00000442708 CBR1P16152 277 aa13.95□□□□□ -0.18
USP39-205ENST00000442708 CD40P25942 277 aa13.95□□□□□ -0.18
USP39-205ENST00000442708 GRK5P34947 590 aa13.95□□□□□ -0.18
USP39-205ENST00000442708 CAPZA2P47755 286 aa13.95□□□□□ -0.18
USP39-205ENST00000442708 C1QTNF12Q5T7M4 302 aa13.95□□□□□ -0.18
USP39-205ENST00000442708 UGT2A3Q6UWM9 527 aa13.95□□□□□ -0.18
USP39-205ENST00000442708 PQLC1Q8N2U9 271 aa13.95□□□□□ -0.18
USP39-205ENST00000442708 PARP8Q8N3A8 854 aa13.95□□□□□ -0.18
USP39-205ENST00000442708 ZNRF4Q8WWF5 429 aa13.95□□□□□ -0.18
USP39-205ENST00000442708 NEUROG1Q92886 237 aa13.95□□□□□ -0.18
USP39-205ENST00000442708 SNX18Q96RF0 628 aa13.95□□□□□ -0.18
USP39-205ENST00000442708 OSBPL10Q9BXB5 764 aa13.95□□□□□ -0.18
USP39-205ENST00000442708 LIME1Q9H400 295 aa13.95□□□□□ -0.18
USP39-205ENST00000442708 PLEKHF2Q9H8W4 249 aa13.95□□□□□ -0.18
USP39-205ENST00000442708 SIAEQ9HAT2 523 aa13.95□□□□□ -0.18
USP39-205ENST00000442708 SRA1Q9HD15 236 aaKnown RBP13.95□□□□□ -0.18
USP39-205ENST00000442708 EMC7Q9NPA0 242 aa13.95□□□□□ -0.18
USP39-205ENST00000442708 RPRD1BQ9NQG5 326 aaKnown RBP13.95□□□□□ -0.18
USP39-205ENST00000442708 POLE4Q9NR33 117 aa13.95□□□□□ -0.18
USP39-205ENST00000442708 KRT84Q9NSB2 600 aa13.95□□□□□ -0.18
USP39-205ENST00000442708 B9D1Q9UPM9 204 aa13.95□□□□□ -0.18
USP39-205ENST00000442708 BAIAP2Q9UQB8 552 aa13.95□□□□□ -0.18
USP39-205ENST00000442708 ROS1P08922 2347 aa13.95□□□□□ -0.18
USP39-205ENST00000442708 FAM171A2A8MVW0 826 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 SHISA9B4DS77 424 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 KHDRBS3O75525 346 aaKnown RBP13.94□□□□□ -0.18
USP39-205ENST00000442708 RENP00797 406 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 IGKV3-15P01624 115 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 MMP7P09237 267 aaPredicted RBP13.94□□□□□ -0.18
USP39-205ENST00000442708 CECR9P0C854 216 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 LAP3P28838 519 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 POLR2IP36954 125 aaKnown RBP13.94□□□□□ -0.18
USP39-205ENST00000442708 CRISP1P54107 249 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 NR1H2P55055 460 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 CRMP1Q14194 572 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 ENDOGQ14249 297 aaKnown RBP13.94□□□□□ -0.18
USP39-205ENST00000442708 NRN1LQ496H8 165 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 FAM27BQ5VT28 67 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 FBXW10Q5XX13 1052 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 SLC27A4Q6P1M0 643 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 SSX8Q7RTT4 187 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 ZBTB46Q86UZ6 589 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 CCDC36Q8IYA8 594 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 KBTBD8Q8NFY9 601 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 DNAJC9Q8WXX5 260 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 FBXO17Q96EF6 278 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 MS4A3Q96HJ5 214 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 SLC38A2Q96QD8 506 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 RBM4Q9BWF3 364 aaKnown RBP13.94□□□□□ -0.18
USP39-205ENST00000442708 HCAR1Q9BXC0 346 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 NMNAT2Q9BZQ4 307 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 ESRP2Q9H6T0 727 aaKnown RBP13.94□□□□□ -0.18
USP39-205ENST00000442708 SLC25A19Q9HC21 320 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 NGBQ9NPG2 151 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 CMC2Q9NRP2 79 aa13.94□□□□□ -0.18
USP39-205ENST00000442708 AKAP6Q13023 2319 aa13.93□□□□□ -0.18
USP39-205ENST00000442708 ABCD4O14678 606 aa13.93□□□□□ -0.18
USP39-205ENST00000442708 EI24O14681 340 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms