RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 EEF1A1P5Q5VTE0 462 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 NSUN5P2Q63ZY6 315 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 ULK3Q6PHR2 472 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 TTC33Q6PID6 262 aaPredicted RBP4.2□□□□□ -1.74
PTPN4-206ENST00000441089 ZNF627Q7L945 461 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 GRINAQ7Z429 371 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 PM20D2Q8IYS1 436 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 PARP8Q8N3A8 854 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 TMEM251Q8N6I4 163 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 ARIH2OSQ8N7S6 290 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 ATG16L2Q8NAA4 619 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 OR4K17Q8NGC6 315 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 OR8D4Q8NGM9 314 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 OR1J4Q8NGS1 313 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 OR13C2Q8NGS9 318 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 IL17DQ8TAD2 202 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 PIGXQ8TBF5 258 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 GNPDA2Q8TDQ7 276 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 DNAJA4Q8WW22 397 aaPredicted RBP4.2□□□□□ -1.74
PTPN4-206ENST00000441089 NEU4Q8WWR8 484 aaPredicted RBP4.2□□□□□ -1.74
PTPN4-206ENST00000441089 DNAJC9Q8WXX5 260 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 ST8SIA1Q92185 356 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 TFAP2CQ92754 450 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 KTI12Q96EK9 354 aaPredicted RBP4.2□□□□□ -1.74
PTPN4-206ENST00000441089 DNAJA3Q96EY1 480 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 MPP4Q96JB8 637 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 HS6ST2Q96MM7 605 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 ZNF570Q96NI8 536 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 ZFP3Q96NJ6 502 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 MOGAT1Q96PD6 335 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 ZNF184Q99676 751 aaPredicted RBP4.2□□□□□ -1.74
PTPN4-206ENST00000441089 PITX2Q99697 317 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 FAM173AQ9BQD7 235 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 TMEM43Q9BTV4 400 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 ADI1Q9BV57 179 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 GABARAPL3Q9BY60 117 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 OR11A1Q9GZK7 315 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 VCX3BQ9H321 246 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 RIBC2Q9H4K1 309 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 EGLN3Q9H6Z9 239 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 C12orf10Q9HB07 376 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 C8orf4Q9NR00 106 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 SDHAF3Q9NRP4 125 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 KRT84Q9NSB2 600 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 RPS6KB2Q9UBS0 482 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 TMCC3Q9ULS5 477 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 MGAT4BQ9UQ53 548 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 LAMP3Q9UQV4 416 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 C15orf41Q9Y2V0 281 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 TMED7Q9Y3B3 224 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 MED31Q9Y3C7 131 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 AP4B1Q9Y6B7 739 aa4.2□□□□□ -1.74
PTPN4-206ENST00000441089 HEATR1Q9H583 2144 aaKnown RBP4.19□□□□□ -1.74
PTPN4-206ENST00000441089 OR2M5A3KFT3 312 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 MBD3L3A6NE82 208 aaPredicted RBP4.19□□□□□ -1.74
PTPN4-206ENST00000441089 UNC119BA6NIH7 251 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 CD8B2A6NJW9 211 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 ZAR1LA6NP61 321 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 M0R129 80 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 HS3ST1O14792 307 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 SLC16A6O15403 523 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 DENRO43583 198 aaKnown RBP4.19□□□□□ -1.74
PTPN4-206ENST00000441089 CDC14BO60729 498 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 PTP4A3O75365 173 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 CBR3O75828 277 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 OR7A10O76100 309 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 VENTXO95231 258 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 CH25HO95992 272 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 OPN1LWP04000 364 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 PNMTP11086 282 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 OSMP13725 252 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 UQCRBP14927 111 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 ACADSP16219 412 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 SLC25A16P16260 332 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 FPR3P25089 353 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 DPP4P27487 766 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 SRD5A2P31213 254 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 IFNA8P32881 189 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 CAPGP40121 348 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 MASP1P48740 699 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 ZNF41P51814 821 aaPredicted RBP4.19□□□□□ -1.74
PTPN4-206ENST00000441089 ARHGDIAP52565 204 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 CRISP1P54107 249 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 DSCR4P56555 118 aaPredicted RBP4.19□□□□□ -1.74
PTPN4-206ENST00000441089 DSCR9P59020 149 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 COPZ1P61923 177 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 IL1RL1Q01638 556 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 NPRL3Q12980 569 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 TSPAN31Q12999 210 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 SCGB2A2Q13296 93 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 ZNF74Q16587 644 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 TM4SF20Q53R12 229 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 BEX5Q5H9J7 111 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 TMEM236Q5W0B7 351 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 LAIR2Q6ISS4 152 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 ZNF704Q6ZNC4 412 aaPredicted RBP4.19□□□□□ -1.74
PTPN4-206ENST00000441089 ZNF620Q6ZNG0 422 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 RASSF6Q6ZTQ3 369 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 IL17RELQ6ZVW7 336 aa4.19□□□□□ -1.74
PTPN4-206ENST00000441089 TMPRSS11FQ6ZWK6 438 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms