RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 DUX4L9Q6RFH8 374 aaPredicted RBP2.85□□□□□ -1.95
PFDN4-202ENST00000441080 TMEM107Q6UX40 140 aa2.85□□□□□ -1.95
PFDN4-202ENST00000441080 Q6ZR03 302 aa2.85□□□□□ -1.95
PFDN4-202ENST00000441080 NIPA1Q7RTP0 329 aa2.85□□□□□ -1.95
PFDN4-202ENST00000441080 C15orf56Q8N910 161 aa2.85□□□□□ -1.95
PFDN4-202ENST00000441080 KCNG3Q8TAE7 436 aa2.85□□□□□ -1.95
PFDN4-202ENST00000441080 GPR151Q8TDV0 419 aa2.85□□□□□ -1.95
PFDN4-202ENST00000441080 FRZBQ92765 325 aa2.85□□□□□ -1.95
PFDN4-202ENST00000441080 CREB3L1Q96BA8 519 aa2.85□□□□□ -1.95
PFDN4-202ENST00000441080 PDXPQ96GD0 296 aa2.85□□□□□ -1.95
PFDN4-202ENST00000441080 PKIBQ9C010 78 aa2.85□□□□□ -1.95
PFDN4-202ENST00000441080 ZNF430Q9H8G1 570 aaPredicted RBP2.85□□□□□ -1.95
PFDN4-202ENST00000441080 ZNF282Q9UDV7 671 aaPredicted RBP2.85□□□□□ -1.95
PFDN4-202ENST00000441080 PISDQ9UG56 409 aa2.85□□□□□ -1.95
PFDN4-202ENST00000441080 LSM7Q9UK45 103 aaKnown RBP2.85□□□□□ -1.95
PFDN4-202ENST00000441080 ING4Q9UNL4 249 aa2.85□□□□□ -1.95
PFDN4-202ENST00000441080 PSG8Q9UQ74 426 aa2.85□□□□□ -1.95
PFDN4-202ENST00000441080 STARD10Q9Y365 291 aa2.85□□□□□ -1.95
PFDN4-202ENST00000441080 LRP4O75096 1905 aa2.85□□□□□ -1.95
PFDN4-202ENST00000441080 ZNFX1Q9P2E3 1918 aaKnown RBP2.85□□□□□ -1.95
PFDN4-202ENST00000441080 SLIT3O75094 1523 aa2.84□□□□□ -1.95
PFDN4-202ENST00000441080 A0A1B0GVX0 72 aa2.84□□□□□ -1.95
PFDN4-202ENST00000441080 CDC7O00311 574 aa2.84□□□□□ -1.95
PFDN4-202ENST00000441080 SLC25A14O95258 325 aaPredicted RBP2.84□□□□□ -1.95
PFDN4-202ENST00000441080 RHOXF2BP0C7M4 288 aa2.84□□□□□ -1.95
PFDN4-202ENST00000441080 ZNF43P17038 809 aa2.84□□□□□ -1.95
PFDN4-202ENST00000441080 MAS1LP35410 378 aa2.84□□□□□ -1.95
PFDN4-202ENST00000441080 PMELP40967 661 aa2.84□□□□□ -1.95
PFDN4-202ENST00000441080 CDKN2BP42772 138 aa2.84□□□□□ -1.95
PFDN4-202ENST00000441080 NAMPTP43490 491 aa2.84□□□□□ -1.95
PFDN4-202ENST00000441080 SSR4P51571 173 aa2.84□□□□□ -1.95
PFDN4-202ENST00000441080 ATP5IP56385 69 aaPredicted RBP2.84□□□□□ -1.95
PFDN4-202ENST00000441080 MAB21L1Q13394 359 aa2.84□□□□□ -1.95
PFDN4-202ENST00000441080 PPP1R7Q15435 360 aa2.84□□□□□ -1.95
PFDN4-202ENST00000441080 VPS26BQ4G0F5 336 aa2.84□□□□□ -1.95
PFDN4-202ENST00000441080 C5orf47Q569G3 176 aa2.84□□□□□ -1.95
PFDN4-202ENST00000441080 CCNJQ5T5M9 372 aa2.84□□□□□ -1.95
PFDN4-202ENST00000441080 ANKRD22Q5VYY1 191 aa2.84□□□□□ -1.95
PFDN4-202ENST00000441080 ANKRD26P1Q6NSI1 321 aa2.84□□□□□ -1.95
PFDN4-202ENST00000441080 TEX43Q6ZNM6 134 aa2.84□□□□□ -1.95
PFDN4-202ENST00000441080 BIVMQ86UB2 503 aa2.84□□□□□ -1.95
PFDN4-202ENST00000441080 LIX1Q8N485 282 aa2.84□□□□□ -1.95
PFDN4-202ENST00000441080 NTN4Q9HB63 628 aa2.84□□□□□ -1.95
PFDN4-202ENST00000441080 CSDC2Q9Y534 153 aaKnown RBP2.84□□□□□ -1.95
PFDN4-202ENST00000441080 COL4A4P53420 1690 aaPredicted RBP2.83□□□□□ -1.96
PFDN4-202ENST00000441080 TMEM150BA6NC51 233 aa2.83□□□□□ -1.96
PFDN4-202ENST00000441080 SPECC1L-ADORA2AF8WAN1 911 aa2.83□□□□□ -1.96
PFDN4-202ENST00000441080 CLIC3O95833 236 aa2.83□□□□□ -1.96
PFDN4-202ENST00000441080 CISD3P0C7P0 127 aa2.83□□□□□ -1.96
PFDN4-202ENST00000441080 PSMC3P17980 439 aa2.83□□□□□ -1.96
PFDN4-202ENST00000441080 CSNK1A1P48729 337 aa2.83□□□□□ -1.96
PFDN4-202ENST00000441080 CCNHP51946 323 aaPredicted RBP2.83□□□□□ -1.96
PFDN4-202ENST00000441080 TWF1Q12792 350 aa2.83□□□□□ -1.96
PFDN4-202ENST00000441080 SPECC1LQ69YQ0 1117 aa2.83□□□□□ -1.96
PFDN4-202ENST00000441080 FAM228AQ86W67 206 aa2.83□□□□□ -1.96
PFDN4-202ENST00000441080 CDR2LQ86X02 465 aaPredicted RBP2.83□□□□□ -1.96
PFDN4-202ENST00000441080 AKR7LQ8NHP1 331 aa2.83□□□□□ -1.96
PFDN4-202ENST00000441080 SYNPRQ8TBG9 265 aa2.83□□□□□ -1.96
PFDN4-202ENST00000441080 SLC2A14Q8TDB8 520 aa2.83□□□□□ -1.96
PFDN4-202ENST00000441080 TM4SF18Q96CE8 201 aa2.83□□□□□ -1.96
PFDN4-202ENST00000441080 TPD52L3Q96J77 140 aa2.83□□□□□ -1.96
PFDN4-202ENST00000441080 SERPINB12Q96P63 405 aa2.83□□□□□ -1.96
PFDN4-202ENST00000441080 ATP5SQ99766 215 aa2.83□□□□□ -1.96
PFDN4-202ENST00000441080 SLC25A2Q9BXI2 301 aa2.83□□□□□ -1.96
PFDN4-202ENST00000441080 ILKAPQ9H0C8 392 aaPredicted RBP2.83□□□□□ -1.96
PFDN4-202ENST00000441080 PARP12Q9H0J9 701 aaKnown RBP2.83□□□□□ -1.96
PFDN4-202ENST00000441080 KCNJ16Q9NPI9 418 aa2.83□□□□□ -1.96
PFDN4-202ENST00000441080 GOLT1BQ9Y3E0 138 aa2.83□□□□□ -1.96
PFDN4-202ENST00000441080 IGKV6-21A0A0C4DH24 114 aa2.82□□□□□ -1.96
PFDN4-202ENST00000441080 ZNF816-ZNF321PA0A0X1KG74 233 aa2.82□□□□□ -1.96
PFDN4-202ENST00000441080 A0A1W2PQ67 120 aa2.82□□□□□ -1.96
PFDN4-202ENST00000441080 BET1O15155 118 aa2.82□□□□□ -1.96
PFDN4-202ENST00000441080 DPM1O60762 260 aa2.82□□□□□ -1.96
PFDN4-202ENST00000441080 HLA-DPB1P04440 258 aa2.82□□□□□ -1.96
PFDN4-202ENST00000441080 BCHEP06276 602 aa2.82□□□□□ -1.96
PFDN4-202ENST00000441080 UQCRFS1P1P0C7P4 283 aa2.82□□□□□ -1.96
PFDN4-202ENST00000441080 IGHV1-8P0DP01 117 aa2.82□□□□□ -1.96
PFDN4-202ENST00000441080 CEACAM6P40199 344 aa2.82□□□□□ -1.96
PFDN4-202ENST00000441080 ARG2P78540 354 aa2.82□□□□□ -1.96
PFDN4-202ENST00000441080 STK11Q15831 433 aa2.82□□□□□ -1.96
PFDN4-202ENST00000441080 RABL6Q3YEC7 729 aaPredicted RBP2.82□□□□□ -1.96
PFDN4-202ENST00000441080 ABCA11PQ4W5N1 156 aa2.82□□□□□ -1.96
PFDN4-202ENST00000441080 SLC22A9Q8IVM8 553 aa2.82□□□□□ -1.96
PFDN4-202ENST00000441080 ZNF561Q8N587 486 aa2.82□□□□□ -1.96
PFDN4-202ENST00000441080 SLC7A13Q8TCU3 470 aa2.82□□□□□ -1.96
PFDN4-202ENST00000441080 CCDC126Q96EE4 140 aa2.82□□□□□ -1.96
PFDN4-202ENST00000441080 PKNOX2Q96KN3 472 aa2.82□□□□□ -1.96
PFDN4-202ENST00000441080 SPIN2AQ99865 258 aa2.82□□□□□ -1.96
PFDN4-202ENST00000441080 SPIN2BQ9BPZ2 258 aa2.82□□□□□ -1.96
PFDN4-202ENST00000441080 UVRAGQ9P2Y5 699 aa2.82□□□□□ -1.96
PFDN4-202ENST00000441080 OPN4Q9UHM6 478 aa2.82□□□□□ -1.96
PFDN4-202ENST00000441080 HPCAL4Q9UM19 191 aa2.82□□□□□ -1.96
PFDN4-202ENST00000441080 IGSF9BQ9UPX0 1349 aa2.82□□□□□ -1.96
PFDN4-202ENST00000441080 IGHV5-10-1A0A0J9YXX1 117 aa2.81□□□□□ -1.96
PFDN4-202ENST00000441080 TCP11X1B4DZS4 312 aa2.81□□□□□ -1.96
PFDN4-202ENST00000441080 MRPS12O15235 138 aaKnown RBP2.81□□□□□ -1.96
PFDN4-202ENST00000441080 CLPXO76031 633 aa2.81□□□□□ -1.96
PFDN4-202ENST00000441080 SRP72O76094 671 aaKnown RBP2.81□□□□□ -1.96
PFDN4-202ENST00000441080 CRYGBP07316 175 aa2.81□□□□□ -1.96
PFDN4-202ENST00000441080 AQP2P41181 271 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms