RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 CREBBPQ92793 2442 aa15.67■□□□□ 0.1
CPSF4-205ENST00000440514 AKAP9Q99996 3911 aa15.67■□□□□ 0.1
CPSF4-205ENST00000440514 E2F6O75461 281 aa15.66■□□□□ 0.1
CPSF4-205ENST00000440514 TIPRLO75663 272 aa15.66■□□□□ 0.1
CPSF4-205ENST00000440514 SOX14O95416 240 aa15.66■□□□□ 0.1
CPSF4-205ENST00000440514 TXNDC12O95881 172 aa15.66■□□□□ 0.1
CPSF4-205ENST00000440514 CRYAAP02489 173 aa15.66■□□□□ 0.1
CPSF4-205ENST00000440514 IGFBP1P08833 259 aaPredicted RBP15.66■□□□□ 0.1
CPSF4-205ENST00000440514 DANCRP0C864 163 aa15.66■□□□□ 0.1
CPSF4-205ENST00000440514 CTLA4P16410 223 aa15.66■□□□□ 0.1
CPSF4-205ENST00000440514 ZNF14P17017 642 aaPredicted RBP15.66■□□□□ 0.1
CPSF4-205ENST00000440514 RAB1AP62820 205 aa15.66■□□□□ 0.1
CPSF4-205ENST00000440514 TESK1Q15569 626 aa15.66■□□□□ 0.1
CPSF4-205ENST00000440514 ETFDHQ16134 617 aa15.66■□□□□ 0.1
CPSF4-205ENST00000440514 SGCAQ16586 387 aa15.66■□□□□ 0.1
CPSF4-205ENST00000440514 SLC16A14Q7RTX9 510 aa15.66■□□□□ 0.1
CPSF4-205ENST00000440514 ADCK1Q86TW2 530 aa15.66■□□□□ 0.1
CPSF4-205ENST00000440514 HS3ST5Q8IZT8 346 aa15.66■□□□□ 0.1
CPSF4-205ENST00000440514 GIPC3Q8TF64 312 aa15.66■□□□□ 0.1
CPSF4-205ENST00000440514 SMAP2Q8WU79 429 aaPredicted RBP15.66■□□□□ 0.1
CPSF4-205ENST00000440514 FOXN4Q96NZ1 517 aa15.66■□□□□ 0.1
CPSF4-205ENST00000440514 FOXC2Q99958 501 aa15.66■□□□□ 0.1
CPSF4-205ENST00000440514 NIPSNAP1Q9BPW8 284 aa15.66■□□□□ 0.1
CPSF4-205ENST00000440514 DGCR6LQ9BY27 220 aa15.66■□□□□ 0.1
CPSF4-205ENST00000440514 TBC1D23Q9NUY8 699 aa15.66■□□□□ 0.1
CPSF4-205ENST00000440514 BEX4Q9NWD9 120 aaPredicted RBP15.66■□□□□ 0.1
CPSF4-205ENST00000440514 DNAJB9Q9UBS3 223 aa15.66■□□□□ 0.1
CPSF4-205ENST00000440514 LAMP3Q9UQV4 416 aa15.66■□□□□ 0.1
CPSF4-205ENST00000440514 OTOGQ6ZRI0 2925 aa15.65■□□□□ 0.1
CPSF4-205ENST00000440514 IGHV2OR16-5A0A0B4J2B6 119 aa15.65■□□□□ 0.1
CPSF4-205ENST00000440514 AHCYL1O43865 530 aa15.65■□□□□ 0.1
CPSF4-205ENST00000440514 APEHP13798 732 aaKnown RBP15.65■□□□□ 0.1
CPSF4-205ENST00000440514 CDKN2AP42771 156 aaKnown RBP15.65■□□□□ 0.1
CPSF4-205ENST00000440514 DBPQ10586 325 aaPredicted RBP15.65■□□□□ 0.1
CPSF4-205ENST00000440514 RAB39AQ14964 217 aa15.65■□□□□ 0.1
CPSF4-205ENST00000440514 NRN1LQ496H8 165 aa15.65■□□□□ 0.1
CPSF4-205ENST00000440514 RASSF6Q6ZTQ3 369 aa15.65■□□□□ 0.1
CPSF4-205ENST00000440514 FOXL2NBQ6ZUU3 175 aa15.65■□□□□ 0.1
CPSF4-205ENST00000440514 OR52L1Q8NGH7 329 aa15.65■□□□□ 0.1
CPSF4-205ENST00000440514 TMEM171Q8WVE6 324 aa15.65■□□□□ 0.1
CPSF4-205ENST00000440514 PIGTQ969N2 578 aa15.65■□□□□ 0.1
CPSF4-205ENST00000440514 RAB3IPQ96QF0 476 aaPredicted RBP15.65■□□□□ 0.1
CPSF4-205ENST00000440514 FEVQ99581 238 aa15.65■□□□□ 0.1
CPSF4-205ENST00000440514 RERGLQ9H628 205 aa15.65■□□□□ 0.1
CPSF4-205ENST00000440514 SIAEQ9HAT2 523 aa15.65■□□□□ 0.1
CPSF4-205ENST00000440514 VSX1Q9NZR4 365 aaPredicted RBP15.65■□□□□ 0.1
CPSF4-205ENST00000440514 PDP1Q9P0J1 537 aaPredicted RBP15.65■□□□□ 0.1
CPSF4-205ENST00000440514 HEATR1Q9H583 2144 aaKnown RBP15.64■□□□□ 0.09
CPSF4-205ENST00000440514 ARPC3O15145 178 aa15.64■□□□□ 0.09
CPSF4-205ENST00000440514 SLC16A7O60669 478 aa15.64■□□□□ 0.09
CPSF4-205ENST00000440514 SMPD2O60906 423 aa15.64■□□□□ 0.09
CPSF4-205ENST00000440514 TP53P04637 393 aaPredicted RBP15.64■□□□□ 0.09
CPSF4-205ENST00000440514 FCGR1AP12314 374 aa15.64■□□□□ 0.09
CPSF4-205ENST00000440514 HIST1H1CP16403 213 aaKnown RBP15.64■□□□□ 0.09
CPSF4-205ENST00000440514 NPR2P20594 1047 aa15.64■□□□□ 0.09
CPSF4-205ENST00000440514 GSTM3P21266 225 aa15.64■□□□□ 0.09
CPSF4-205ENST00000440514 SLC36A2Q495M3 483 aa15.64■□□□□ 0.09
CPSF4-205ENST00000440514 SLC35F1Q5T1Q4 408 aa15.64■□□□□ 0.09
CPSF4-205ENST00000440514 OTPQ5XKR4 325 aa15.64■□□□□ 0.09
CPSF4-205ENST00000440514 TMEM53Q6P2H8 277 aa15.64■□□□□ 0.09
CPSF4-205ENST00000440514 LEG1Q6P5S2 330 aa15.64■□□□□ 0.09
CPSF4-205ENST00000440514 JAZF1Q86VZ6 243 aa15.64■□□□□ 0.09
CPSF4-205ENST00000440514 ZNF584Q8IVC4 421 aa15.64■□□□□ 0.09
CPSF4-205ENST00000440514 SDR9C7Q8NEX9 313 aa15.64■□□□□ 0.09
CPSF4-205ENST00000440514 OR4K13Q8NH42 304 aa15.64■□□□□ 0.09
CPSF4-205ENST00000440514 DHRS9Q9BPW9 319 aa15.64■□□□□ 0.09
CPSF4-205ENST00000440514 CXXC4Q9H2H0 198 aa15.64■□□□□ 0.09
CPSF4-205ENST00000440514 RNF121Q9H920 327 aa15.64■□□□□ 0.09
CPSF4-205ENST00000440514 EMC7Q9NPA0 242 aa15.64■□□□□ 0.09
CPSF4-205ENST00000440514 ARMC1Q9NVT9 282 aa15.64■□□□□ 0.09
CPSF4-205ENST00000440514 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.64■□□□□ 0.09
CPSF4-205ENST00000440514 PLCE1Q9P212 2302 aa15.64■□□□□ 0.09
CPSF4-205ENST00000440514 ARRDC5A6NEK1 342 aa15.63■□□□□ 0.09
CPSF4-205ENST00000440514 BHLHE40O14503 412 aa15.63■□□□□ 0.09
CPSF4-205ENST00000440514 DEAF1O75398 565 aaPredicted RBP15.63■□□□□ 0.09
CPSF4-205ENST00000440514 SCG5P05408 212 aa15.63■□□□□ 0.09
CPSF4-205ENST00000440514 MMP7P09237 267 aaPredicted RBP15.63■□□□□ 0.09
CPSF4-205ENST00000440514 LAP3P28838 519 aa15.63■□□□□ 0.09
CPSF4-205ENST00000440514 NOS3P29474 1203 aa15.63■□□□□ 0.09
CPSF4-205ENST00000440514 CDKN1AP38936 164 aa15.63■□□□□ 0.09
CPSF4-205ENST00000440514 HGFACQ04756 655 aa15.63■□□□□ 0.09
CPSF4-205ENST00000440514 FBXO17Q96EF6 278 aa15.63■□□□□ 0.09
CPSF4-205ENST00000440514 PERPQ96FX8 193 aa15.63■□□□□ 0.09
CPSF4-205ENST00000440514 TSSK2Q96PF2 358 aa15.63■□□□□ 0.09
CPSF4-205ENST00000440514 NMNAT3Q96T66 252 aa15.63■□□□□ 0.09
CPSF4-205ENST00000440514 TRAF4Q9BUZ4 470 aaPredicted RBP15.63■□□□□ 0.09
CPSF4-205ENST00000440514 NUAK2Q9H093 628 aa15.63■□□□□ 0.09
CPSF4-205ENST00000440514 FN3KQ9H479 309 aa15.63■□□□□ 0.09
CPSF4-205ENST00000440514 NTN4Q9HB63 628 aa15.63■□□□□ 0.09
CPSF4-205ENST00000440514 CCNB1IP1Q9NPC3 277 aa15.63■□□□□ 0.09
CPSF4-205ENST00000440514 POLE4Q9NR33 117 aa15.63■□□□□ 0.09
CPSF4-205ENST00000440514 IL20Q9NYY1 176 aa15.63■□□□□ 0.09
CPSF4-205ENST00000440514 PRRC2AP48634 2157 aaKnown RBP15.62■□□□□ 0.09
CPSF4-205ENST00000440514 DCTN6O00399 190 aa15.62■□□□□ 0.09
CPSF4-205ENST00000440514 KHDRBS3O75525 346 aaKnown RBP15.62■□□□□ 0.09
CPSF4-205ENST00000440514 CD8AP01732 235 aa15.62■□□□□ 0.09
CPSF4-205ENST00000440514 ZNF32P17041 273 aa15.62■□□□□ 0.09
CPSF4-205ENST00000440514 MSR1P21757 451 aa15.62■□□□□ 0.09
CPSF4-205ENST00000440514 PRKACGP22612 351 aa15.62■□□□□ 0.09
CPSF4-205ENST00000440514 GUCA1AP43080 201 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms