RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 CCDC124Q96CT7 223 aaKnown RBP20.45■□□□□ 0.86
VARS-217ENST00000440048 GPX7Q96SL4 187 aaPredicted RBP20.45■□□□□ 0.86
VARS-217ENST00000440048 ZNF442Q9H7R0 627 aa20.45■□□□□ 0.86
VARS-217ENST00000440048 RNF121Q9H920 327 aa20.45■□□□□ 0.86
VARS-217ENST00000440048 BARX1Q9HBU1 254 aaPredicted RBP20.45■□□□□ 0.86
VARS-217ENST00000440048 IL20RAQ9UHF4 553 aa20.45■□□□□ 0.86
VARS-217ENST00000440048 TMCC3Q9ULS5 477 aa20.45■□□□□ 0.86
VARS-217ENST00000440048 FAM171A2A8MVW0 826 aa20.44■□□□□ 0.86
VARS-217ENST00000440048 H7C1C5 153 aa20.44■□□□□ 0.86
VARS-217ENST00000440048 H7C417 338 aa20.44■□□□□ 0.86
VARS-217ENST00000440048 MGRN1O60291 552 aa20.44■□□□□ 0.86
VARS-217ENST00000440048 OR10H3O60404 316 aa20.44■□□□□ 0.86
VARS-217ENST00000440048 INHBBP09529 407 aa20.44■□□□□ 0.86
VARS-217ENST00000440048 BMP4P12644 408 aa20.44■□□□□ 0.86
VARS-217ENST00000440048 NPR2P20594 1047 aa20.44■□□□□ 0.86
VARS-217ENST00000440048 NR4A1P22736 598 aa20.44■□□□□ 0.86
VARS-217ENST00000440048 MAGEA2P43356 314 aa20.44■□□□□ 0.86
VARS-217ENST00000440048 LCN6P62502 163 aa20.44■□□□□ 0.86
VARS-217ENST00000440048 SNTB2Q13425 540 aaKnown RBP20.44■□□□□ 0.86
VARS-217ENST00000440048 DAG1Q14118 895 aa20.44■□□□□ 0.86
VARS-217ENST00000440048 SGCAQ16586 387 aa20.44■□□□□ 0.86
VARS-217ENST00000440048 MESTQ5EB52 335 aa20.44■□□□□ 0.86
VARS-217ENST00000440048 KRT80Q6KB66 452 aa20.44■□□□□ 0.86
VARS-217ENST00000440048 ASB9Q96DX5 294 aa20.44■□□□□ 0.86
VARS-217ENST00000440048 COX4I2Q96KJ9 171 aa20.44■□□□□ 0.86
VARS-217ENST00000440048 ZNF570Q96NI8 536 aa20.44■□□□□ 0.86
VARS-217ENST00000440048 GSX1Q9H4S2 264 aaPredicted RBP20.44■□□□□ 0.86
VARS-217ENST00000440048 MAGIXQ9H6Y5 334 aa20.44■□□□□ 0.86
VARS-217ENST00000440048 NRIP3Q9NQ35 241 aa20.44■□□□□ 0.86
VARS-217ENST00000440048 PMF1-BGLAPU3KQ54 211 aa20.44■□□□□ 0.86
VARS-217ENST00000440048 SLC22A23A1A5C7 686 aa20.43■□□□□ 0.86
VARS-217ENST00000440048 XKRYO14609 159 aa20.43■□□□□ 0.86
VARS-217ENST00000440048 KRT36O76013 467 aa20.43■□□□□ 0.86
VARS-217ENST00000440048 MMP7P09237 267 aaPredicted RBP20.43■□□□□ 0.86
VARS-217ENST00000440048 TNK1Q13470 666 aa20.43■□□□□ 0.86
VARS-217ENST00000440048 RAB35Q15286 201 aa20.43■□□□□ 0.86
VARS-217ENST00000440048 EFNB3Q15768 340 aa20.43■□□□□ 0.86
VARS-217ENST00000440048 SMARCD3Q6STE5 483 aa20.43■□□□□ 0.86
VARS-217ENST00000440048 RASD2Q96D21 266 aa20.43■□□□□ 0.86
VARS-217ENST00000440048 LYVE1Q9Y5Y7 322 aa20.43■□□□□ 0.86
VARS-217ENST00000440048 CSPG4Q6UVK1 2322 aa20.42■□□□□ 0.86
VARS-217ENST00000440048 TEX13CA0A0J9YWL9 993 aa20.42■□□□□ 0.86
VARS-217ENST00000440048 B9A039 149 aa20.42■□□□□ 0.86
VARS-217ENST00000440048 ACOT8O14734 319 aa20.42■□□□□ 0.86
VARS-217ENST00000440048 SSX4O60224 188 aa20.42■□□□□ 0.86
VARS-217ENST00000440048 FPR3P25089 353 aa20.42■□□□□ 0.86
VARS-217ENST00000440048 SDHAP31040 664 aa20.42■□□□□ 0.86
VARS-217ENST00000440048 IFNGR2P38484 337 aa20.42■□□□□ 0.86
VARS-217ENST00000440048 HMGA2P52926 109 aa20.42■□□□□ 0.86
VARS-217ENST00000440048 SNRPD2P62316 118 aaKnown RBP20.42■□□□□ 0.86
VARS-217ENST00000440048 KRR1Q13601 381 aaKnown RBP20.42■□□□□ 0.86
VARS-217ENST00000440048 GPR139Q6DWJ6 353 aa20.42■□□□□ 0.86
VARS-217ENST00000440048 DPY19L2P2Q6ZN68 376 aa20.42■□□□□ 0.86
VARS-217ENST00000440048 FOXL2NBQ6ZUU3 175 aa20.42■□□□□ 0.86
VARS-217ENST00000440048 FANK1Q8TC84 345 aa20.42■□□□□ 0.86
VARS-217ENST00000440048 SMR3AQ99954 134 aa20.42■□□□□ 0.86
VARS-217ENST00000440048 KCNN2Q9H2S1 579 aa20.42■□□□□ 0.86
VARS-217ENST00000440048 SPEF1Q9Y4P9 236 aa20.42■□□□□ 0.86
VARS-217ENST00000440048 IER3IP1Q9Y5U9 82 aa20.42■□□□□ 0.86
VARS-217ENST00000440048 PRSS37A4D1T9 235 aa20.41■□□□□ 0.86
VARS-217ENST00000440048 VSTM5A8MXK1 200 aa20.41■□□□□ 0.86
VARS-217ENST00000440048 TNFRSF11BO00300 401 aa20.41■□□□□ 0.86
VARS-217ENST00000440048 SMAD7O15105 426 aaKnown RBP20.41■□□□□ 0.86
VARS-217ENST00000440048 GYG2O15488 501 aa20.41■□□□□ 0.86
VARS-217ENST00000440048 AHCYL1O43865 530 aa20.41■□□□□ 0.86
VARS-217ENST00000440048 GSSP48637 474 aa20.41■□□□□ 0.86
VARS-217ENST00000440048 DNAL1Q4LDG9 190 aa20.41■□□□□ 0.86
VARS-217ENST00000440048 FAM98BQ52LJ0 330 aaKnown RBP20.41■□□□□ 0.86
VARS-217ENST00000440048 FAM27BQ5VT28 67 aa20.41■□□□□ 0.86
VARS-217ENST00000440048 C1orf94Q6P1W5 598 aa20.41■□□□□ 0.86
VARS-217ENST00000440048 DNM1P46Q6ZS02 220 aa20.41■□□□□ 0.86
VARS-217ENST00000440048 SLC30A7Q8NEW0 376 aa20.41■□□□□ 0.86
VARS-217ENST00000440048 GNPDA2Q8TDQ7 276 aa20.41■□□□□ 0.86
VARS-217ENST00000440048 POP5Q969H6 163 aaKnown RBP20.41■□□□□ 0.86
VARS-217ENST00000440048 SLC7A6OSQ96CW6 309 aaPredicted RBP20.41■□□□□ 0.86
VARS-217ENST00000440048 LRGUKQ96M69 825 aa20.41■□□□□ 0.86
VARS-217ENST00000440048 PLK3Q9H4B4 646 aa20.41■□□□□ 0.86
VARS-217ENST00000440048 A0A1W2PPL8 197 aa20.4■□□□□ 0.86
VARS-217ENST00000440048 SOCS2O14508 198 aa20.4■□□□□ 0.86
VARS-217ENST00000440048 LAP3P28838 519 aa20.4■□□□□ 0.86
VARS-217ENST00000440048 NUDT6P53370 316 aa20.4■□□□□ 0.86
VARS-217ENST00000440048 GALK2Q01415 458 aa20.4■□□□□ 0.86
VARS-217ENST00000440048 PLP2Q04941 152 aa20.4■□□□□ 0.86
VARS-217ENST00000440048 TRAP1Q12931 704 aaKnown RBP20.4■□□□□ 0.86
VARS-217ENST00000440048 RFX4Q33E94 735 aa20.4■□□□□ 0.86
VARS-217ENST00000440048 PGBD2Q6P3X8 592 aa20.4■□□□□ 0.86
VARS-217ENST00000440048 OR4C15Q8NGM1 316 aa20.4■□□□□ 0.86
VARS-217ENST00000440048 TRIM15Q9C019 465 aa20.4■□□□□ 0.86
VARS-217ENST00000440048 OR52D1Q9H346 318 aa20.4■□□□□ 0.86
VARS-217ENST00000440048 C1orf198Q9H425 327 aa20.4■□□□□ 0.86
VARS-217ENST00000440048 CCNB1IP1Q9NPC3 277 aa20.4■□□□□ 0.86
VARS-217ENST00000440048 CMAHPQ9Y471 501 aa20.4■□□□□ 0.86
VARS-217ENST00000440048 IQCMA0A1B0GVH7 501 aa20.39■□□□□ 0.85
VARS-217ENST00000440048 TMEM129A0AVI4 362 aa20.39■□□□□ 0.85
VARS-217ENST00000440048 GPRIN2O60269 458 aa20.39■□□□□ 0.85
VARS-217ENST00000440048 STAMBPO95630 424 aa20.39■□□□□ 0.85
VARS-217ENST00000440048 PPP1R3DO95685 299 aa20.39■□□□□ 0.85
VARS-217ENST00000440048 TXNDC12O95881 172 aa20.39■□□□□ 0.85
VARS-217ENST00000440048 PTHP01270 115 aa20.39■□□□□ 0.85
VARS-217ENST00000440048 CCL2P13500 99 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms