RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 TMEM99Q8N816 258 aa9.46□□□□□ -0.9
CSTF3-203ENST00000438862 HIPK4Q8NE63 616 aa9.46□□□□□ -0.9
CSTF3-203ENST00000438862 FAM71CQ8NEG0 241 aa9.46□□□□□ -0.9
CSTF3-203ENST00000438862 BHLHE22Q8NFJ8 381 aaPredicted RBP9.46□□□□□ -0.9
CSTF3-203ENST00000438862 OR5D16Q8NGK9 328 aa9.46□□□□□ -0.9
CSTF3-203ENST00000438862 BBS10Q8TAM1 723 aa9.46□□□□□ -0.9
CSTF3-203ENST00000438862 PNPT1Q8TCS8 783 aaKnown RBP9.46□□□□□ -0.9
CSTF3-203ENST00000438862 SLC38A5Q8WUX1 472 aa9.46□□□□□ -0.9
CSTF3-203ENST00000438862 KCTD14Q9BQ13 255 aaPredicted RBP9.46□□□□□ -0.9
CSTF3-203ENST00000438862 THTPAQ9BU02 230 aa9.46□□□□□ -0.9
CSTF3-203ENST00000438862 SPATA5L1Q9BVQ7 753 aa9.46□□□□□ -0.9
CSTF3-203ENST00000438862 ZNF350Q9GZX5 532 aa9.46□□□□□ -0.9
CSTF3-203ENST00000438862 GORASP2Q9H8Y8 452 aa9.46□□□□□ -0.9
CSTF3-203ENST00000438862 DUSP13Q9UII6 198 aa9.46□□□□□ -0.9
CSTF3-203ENST00000438862 MAGEL2Q9UJ55 1249 aa9.46□□□□□ -0.9
CSTF3-203ENST00000438862 KCNE5Q9UJ90 142 aa9.46□□□□□ -0.9
CSTF3-203ENST00000438862 PURGQ9UJV8 347 aaKnown RBP9.46□□□□□ -0.9
CSTF3-203ENST00000438862 SLC35A3Q9Y2D2 325 aa9.46□□□□□ -0.9
CSTF3-203ENST00000438862 DSPPQ9NZW4 1301 aa9.46□□□□□ -0.9
CSTF3-203ENST00000438862 TMED7-TICAM2A0A0A6YYA0 188 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 IGHV1-69-2A0A0G2JMI3 117 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 A0A1W2PPW3 197 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 CFAP73A6NFT4 308 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 AQP7P3A6NL99 342 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 C17orf100A8MU93 164 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 C5orf58C9J3I9 102 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 UPK3AO75631 287 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 SERPINB7O75635 380 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 UGT2B17O75795 530 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 SEC14L2O76054 403 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 AKR7A3O95154 331 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 C1QCP02747 245 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 HOXB6P17509 224 aaKnown RBP9.45□□□□□ -0.9
CSTF3-203ENST00000438862 RYKP34925 604 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 CAPZA2P47755 286 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 PCBP3P57721 371 aaKnown RBP9.45□□□□□ -0.9
CSTF3-203ENST00000438862 LOXL3P58215 753 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 SELENOVP59797 346 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 RPS26P62854 115 aaKnown RBP9.45□□□□□ -0.9
CSTF3-203ENST00000438862 HPCAP84074 193 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 GALK2Q01415 458 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 SCARB2Q14108 478 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 PDCD1Q15116 288 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 NKPD1Q17RQ9 610 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 HFEQ30201 348 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 NIPAL3Q6P499 406 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 TMEM154Q6P9G4 183 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 PATL1Q86TB9 770 aaKnown RBP9.45□□□□□ -0.9
CSTF3-203ENST00000438862 KRT73Q86Y46 540 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 CMIPQ8IY22 773 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 C10orf111Q8N326 155 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 FAM110DQ8TAY7 271 aaPredicted RBP9.45□□□□□ -0.9
CSTF3-203ENST00000438862 RASSF5Q8WWW0 418 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 ASB9Q96DX5 294 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 RAB3IPQ96QF0 476 aaPredicted RBP9.45□□□□□ -0.9
CSTF3-203ENST00000438862 ZNF607Q96SK3 696 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 GAL3ST1Q99999 423 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 SLC30A2Q9BRI3 323 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 MRI1Q9BV20 369 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 SSBP4Q9BWG4 385 aaPredicted RBP9.45□□□□□ -0.9
CSTF3-203ENST00000438862 EVA1AQ9H8M9 152 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 HINT3Q9NQE9 182 aaKnown RBP9.45□□□□□ -0.9
CSTF3-203ENST00000438862 ACTR3BQ9P1U1 418 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 MYEF2Q9P2K5 600 aaKnown RBP9.45□□□□□ -0.9
CSTF3-203ENST00000438862 ANGPT4Q9Y264 503 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 POLR3KQ9Y2Y1 108 aaPredicted RBP9.45□□□□□ -0.9
CSTF3-203ENST00000438862 IFT52Q9Y366 437 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 TMED7Q9Y3B3 224 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 WDR45Q9Y484 360 aa9.45□□□□□ -0.9
CSTF3-203ENST00000438862 TMEM72A0PK05 275 aa9.44□□□□□ -0.9
CSTF3-203ENST00000438862 PRAMEF27A3QJZ7 478 aa9.44□□□□□ -0.9
CSTF3-203ENST00000438862 C5orf63A6NC05 138 aa9.44□□□□□ -0.9
CSTF3-203ENST00000438862 ZNF503-AS2A6NEH8 195 aa9.44□□□□□ -0.9
CSTF3-203ENST00000438862 AGAP5A6NIR3 686 aa9.44□□□□□ -0.9
CSTF3-203ENST00000438862 G3V4G9 280 aa9.44□□□□□ -0.9
CSTF3-203ENST00000438862 TSPAN15O95858 294 aa9.44□□□□□ -0.9
CSTF3-203ENST00000438862 GPANK1O95872 356 aa9.44□□□□□ -0.9
CSTF3-203ENST00000438862 KDELR2P33947 212 aa9.44□□□□□ -0.9
CSTF3-203ENST00000438862 IDH2P48735 452 aaKnown RBP9.44□□□□□ -0.9
CSTF3-203ENST00000438862 POLR2HP52434 150 aaKnown RBP9.44□□□□□ -0.9
CSTF3-203ENST00000438862 KRTAP10-3P60369 221 aa9.44□□□□□ -0.9
CSTF3-203ENST00000438862 PSMA6P60900 246 aaKnown RBP9.44□□□□□ -0.9
CSTF3-203ENST00000438862 FUT5Q11128 374 aa9.44□□□□□ -0.9
CSTF3-203ENST00000438862 MAPK11Q15759 364 aa9.44□□□□□ -0.9
CSTF3-203ENST00000438862 FAM189A2Q15884 450 aa9.44□□□□□ -0.9
CSTF3-203ENST00000438862 GPAT3Q53EU6 434 aa9.44□□□□□ -0.9
CSTF3-203ENST00000438862 MTX3Q5HYI7 312 aa9.44□□□□□ -0.9
CSTF3-203ENST00000438862 GLYATQ6IB77 296 aa9.44□□□□□ -0.9
CSTF3-203ENST00000438862 KRTAP19-1Q8IUB9 90 aa9.44□□□□□ -0.9
CSTF3-203ENST00000438862 C10orf67Q8IYJ2 551 aa9.44□□□□□ -0.9
CSTF3-203ENST00000438862 MRAPQ8TCY5 172 aa9.44□□□□□ -0.9
CSTF3-203ENST00000438862 SLC35B4Q969S0 331 aa9.44□□□□□ -0.9
CSTF3-203ENST00000438862 TMEM19Q96HH6 336 aa9.44□□□□□ -0.9
CSTF3-203ENST00000438862 SLC38A1Q9H2H9 487 aa9.44□□□□□ -0.9
CSTF3-203ENST00000438862 DENND2DQ9H6A0 471 aaPredicted RBP9.44□□□□□ -0.9
CSTF3-203ENST00000438862 TCF7L1Q9HCS4 588 aa9.44□□□□□ -0.9
CSTF3-203ENST00000438862 EXOSC3Q9NQT5 275 aaKnown RBP9.44□□□□□ -0.9
CSTF3-203ENST00000438862 MMP26Q9NRE1 261 aa9.44□□□□□ -0.9
CSTF3-203ENST00000438862 DECR2Q9NUI1 292 aa9.44□□□□□ -0.9
CSTF3-203ENST00000438862 B3GNT2Q9NY97 397 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms