RNA–Protein interactions for RNA: ENST00000438120.5

PTPRF-209, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRF, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-209ENST00000438120 GHRLQ9UBU3 117 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 CHRNA9Q9UGM1 479 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 ITGBL1O95965 494 aaPredicted RBP15.74■□□□□ 0.11
PTPRF-209ENST00000438120 CCR2P41597 374 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 OVCH1Q7RTY7 1134 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 WDR5BQ86VZ2 330 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 RNF170Q96K19 258 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 TAS2R4Q9NYW5 299 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 IGHV3-15A0A0B4J1V0 119 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 STMND1H3BQB6 276 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 GFYI3L273 518 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 FCMRO60667 390 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 SCAF4O95104 1147 aaKnown RBP15.74■□□□□ 0.11
PTPRF-209ENST00000438120 WNT11O96014 354 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 NAGAP17050 411 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 NDUFB7P17568 137 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 TESK1Q15569 626 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 FJX1Q86VR8 437 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 OR2W5A6NFC9 320 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 ICOSLGO75144 302 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 RPS27P42677 84 aaKnown RBP15.73■□□□□ 0.11
PTPRF-209ENST00000438120 LGALS4P56470 323 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 HSF1Q00613 529 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 OPCMLQ14982 345 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 FCN2Q15485 313 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 CLDN22Q8N7P3 220 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 TPPP3Q9BW30 176 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 PDFQ9HBH1 243 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 C19orf53Q9UNZ5 99 aaPredicted RBP15.73■□□□□ 0.11
PTPRF-209ENST00000438120 A0A096LPE4 126 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 A0A1W2PPZ6 126 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 DEGS1O15121 323 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 QDPRP09417 244 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 UBE2KP61086 200 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 OR51E1Q8TCB6 317 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 NKX6-3A6NJ46 265 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 IMPA2O14732 288 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 TXNL1O43396 289 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 SNAPINO95295 136 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 GLI4P10075 376 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 EIF2DP41214 584 aaKnown RBP15.73■□□□□ 0.11
PTPRF-209ENST00000438120 ARHGAP11BQ3KRB8 267 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 ZFP82Q8N141 532 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 SEMA6DQ8NFY4 1073 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 ISL2Q96A47 359 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 RBFOX1Q9NWB1 397 aaKnown RBP15.73■□□□□ 0.11
PTPRF-209ENST00000438120 MT-ATP6P00846 226 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 HIST1H1CP16403 213 aaKnown RBP15.73■□□□□ 0.11
PTPRF-209ENST00000438120 GRB2P62993 217 aaKnown RBP15.73■□□□□ 0.11
PTPRF-209ENST00000438120 ANKRD34AQ69YU3 496 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 PAQR6Q6TCH4 344 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 ACER3Q9NUN7 267 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 MUTYHQ9UIF7 546 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 C17orf112F2Z3M2 114 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 CCSO14618 274 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 PRKACAP17612 351 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 RPS19P39019 145 aaKnown RBP15.73■□□□□ 0.11
PTPRF-209ENST00000438120 BTN1A1Q13410 526 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 HTR4Q13639 388 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 IAH1Q2TAA2 248 aaPredicted RBP15.73■□□□□ 0.11
PTPRF-209ENST00000438120 GDPD3Q7L5L3 318 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 HSD17B11Q8NBQ5 300 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 ARPC5LQ9BPX5 153 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 C20orf85Q9H1P6 137 aa15.73■□□□□ 0.11
PTPRF-209ENST00000438120 TARM1B6A8C7 271 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 EIF4E2O60573 245 aaKnown RBP15.72■□□□□ 0.11
PTPRF-209ENST00000438120 PPP3CBP16298 524 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 ZNF92Q03936 586 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 SYT14P1Q58G82 188 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 SLC22A25Q6T423 547 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 SLC5A6Q9Y289 635 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 A0A0D9SG52 128 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 CTSLP07711 333 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 APOBEC1P41238 236 aaKnown RBP15.72■□□□□ 0.11
PTPRF-209ENST00000438120 HNRNPFP52597 415 aaKnown RBP15.72■□□□□ 0.11
PTPRF-209ENST00000438120 GFERP55789 205 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 RFPL4BQ6ZWI9 263 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 OR51H1Q8NH63 302 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 FGF14Q92915 247 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 UCN3Q969E3 161 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 POFUT1Q9H488 388 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 CRLF2Q9HC73 371 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 LTB4R2Q9NPC1 389 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 DUSP22Q9NRW4 184 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 RAB22AQ9UL26 194 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 ZNF891A8MT65 544 aaPredicted RBP15.72■□□□□ 0.11
PTPRF-209ENST00000438120 NID1P14543 1247 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 SLC10A1Q14973 349 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 ZNF346Q9UL40 294 aaKnown RBP15.72■□□□□ 0.11
PTPRF-209ENST00000438120 DEFA4P12838 97 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 HABP2Q14520 560 aaPredicted RBP15.72■□□□□ 0.11
PTPRF-209ENST00000438120 SLC35D3Q5M8T2 416 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 LIPNQ5VXI9 398 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 ASTLQ6HA08 431 aaPredicted RBP15.72■□□□□ 0.11
PTPRF-209ENST00000438120 OR1N1Q8NGS0 311 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 BAHD1Q8TBE0 780 aaPredicted RBP15.72■□□□□ 0.11
PTPRF-209ENST00000438120 HPSE2Q8WWQ2 592 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 OPA3Q9H6K4 179 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 ASH2LQ9UBL3 628 aa15.72■□□□□ 0.11
PTPRF-209ENST00000438120 SPACA5Q96QH8 159 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms