RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 SYNPRQ8TBG9 265 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 DAZLQ92904 295 aaKnown RBP8.54□□□□□ -1.04
CUX1-206ENST00000437600 MVB12AQ96EY5 273 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 SLC46A1Q96NT5 459 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 CHIAQ9BZP6 476 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 TCF7L1Q9HCS4 588 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 PARD6AQ9NPB6 346 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 MED29Q9NX70 200 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 KLHL21Q9UJP4 597 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 RARRES3Q9UL19 164 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 EIF1AYO14602 144 aaKnown RBP8.53□□□□□ -1.04
CUX1-206ENST00000437600 HEXBP07686 556 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 CTLA4P16410 223 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 CCKBRP32239 447 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 DCTDP32321 178 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 EFNB2P52799 333 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 TOR2AQ5JU69 321 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 RHBDD2Q6NTF9 364 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 PRSS35Q8N3Z0 413 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 SUMF1Q8NBK3 374 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 PLPP7Q8NBV4 271 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 OR11H4Q8NGC9 324 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 OR51D1Q8NGF3 324 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 TTC9Q92623 222 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 WWTR1Q9GZV5 400 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 ELOVL3Q9HB03 270 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 OR5V1Q9UGF6 321 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 MMACHCQ9Y4U1 282 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 PMS2P1A4D2B8 440 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 SUSD5O60279 629 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 ALOX12BO75342 701 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 PNMTP11086 282 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 RBMS1P29558 406 aaKnown RBP8.53□□□□□ -1.04
CUX1-206ENST00000437600 PSMD4P55036 377 aaKnown RBP8.53□□□□□ -1.04
CUX1-206ENST00000437600 OC90Q02509 493 aaPredicted RBP8.53□□□□□ -1.04
CUX1-206ENST00000437600 PLA2G2CQ5R387 149 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 LAMTOR1Q6IAA8 161 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 PYHIN1Q6K0P9 492 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 UXS1Q8NBZ7 420 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 ZNF417Q8TAU3 575 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 LRRC20Q8TCA0 184 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 ZFAND1Q8TCF1 268 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 SLC25A38Q96DW6 304 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 UBL7Q96S82 380 aaPredicted RBP8.53□□□□□ -1.04
CUX1-206ENST00000437600 ZNF587Q96SQ5 575 aaPredicted RBP8.53□□□□□ -1.04
CUX1-206ENST00000437600 EDEM2Q9BV94 578 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 CHRNA10Q9GZZ6 450 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 MED28Q9H204 178 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 B9D1Q9UPM9 204 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 NPFFR2Q9Y5X5 522 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 V9GY05 133 aa8.53□□□□□ -1.04
CUX1-206ENST00000437600 XKRYO14609 159 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 CDK2P24941 298 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 HLA-DMAP28067 261 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 COL28A1Q2UY09 1125 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 ESCO2Q56NI9 601 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 OR10K2Q6IF99 312 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 LRFN4Q6PJG9 635 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 SLC29A4Q7RTT9 530 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 PPP1R3BQ86XI6 285 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 CMIPQ8IY22 773 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 SYS1Q8N2H4 156 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 FAM71CQ8NEG0 241 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 OR1N1Q8NGS0 311 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 OR2T4Q8NH00 348 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 FBXL3Q9UKT7 428 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 ELF5Q9UKW6 265 aaPredicted RBP8.52□□□□□ -1.05
CUX1-206ENST00000437600 SPATA2Q9UM82 520 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 COA3Q9Y2R0 106 aaPredicted RBP8.52□□□□□ -1.05
CUX1-206ENST00000437600 PCDHGA9Q9Y5G4 932 aaKnown RBP8.52□□□□□ -1.05
CUX1-206ENST00000437600 TMED7-TICAM2A0A0A6YYA0 188 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 IGKV1D-43A0A0B4J1Z2 117 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 LEUTXA8MZ59 168 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 SMAD9O15198 467 aaKnown RBP8.52□□□□□ -1.05
CUX1-206ENST00000437600 LMX1BO60663 402 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 KDM4BO94953 1096 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 OR6A2O95222 327 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 SERPINA3P01011 423 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 CELA2AP08217 269 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 TRAPPC2P0DI81 140 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 TRAPPC2BP0DI82 140 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 ALOX5APP20292 161 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 ERP29P30040 261 aaKnown RBP8.52□□□□□ -1.05
CUX1-206ENST00000437600 GZMKP49863 264 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 UBE2MP61081 183 aaKnown RBP8.52□□□□□ -1.05
CUX1-206ENST00000437600 INSM1Q01101 510 aaPredicted RBP8.52□□□□□ -1.05
CUX1-206ENST00000437600 GUCA2AQ02747 115 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 ALKBH1Q13686 389 aaKnown RBP8.52□□□□□ -1.05
CUX1-206ENST00000437600 ST3GAL2Q16842 350 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 ZNF684Q5T5D7 378 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 METTL11BQ5VVY1 283 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 SLITRK4Q8IW52 837 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 OR2G2Q8NGZ5 317 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 OR8S1Q8NH09 359 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 AKAP1Q92667 903 aaKnown RBP eCLIP8.52□□□□□ -1.051e-6■■■■□ 21.5
CUX1-206ENST00000437600 DVL3Q92997 716 aaPredicted RBP8.52□□□□□ -1.05
CUX1-206ENST00000437600 ADAM19Q9H013 955 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 ING3Q9NXR8 418 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 TMED7Q9Y3B3 224 aa8.52□□□□□ -1.05
CUX1-206ENST00000437600 MAP1BP46821 2468 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms