RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 FAM109AQ8N4B1 249 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 USP22Q9UPT9 525 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 POLDIP2Q9Y2S7 368 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 SNX11Q9Y5W9 270 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 CACNA1CQ13936 2221 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 HMGN4O00479 90 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 ZDHHC11BP0C7U3 371 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 SLC16A11Q8NCK7 471 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 TMEM185AQ8NFB2 350 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 OR1S2Q8NGQ3 325 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 FAM3DQ96BQ1 224 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 BTF3L4Q96K17 158 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 ZNF732B4DXR9 585 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 AKR7A3O95154 331 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 PAPLNO95428 1278 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 SOD1P00441 154 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 FGGYQ96C11 551 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 ZIC5Q96T25 663 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 ARPC5LQ9BPX5 153 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 PROCRQ9UNN8 238 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 TIMM10BQ9Y5J6 103 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 SELENOFO60613 162 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 F10P00742 488 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 APOA2P02652 100 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 GLAP06280 429 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 EGR3Q06889 387 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 CRMP1Q14194 572 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 CST9LP1Q5W188 147 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 OPA3Q9H6K4 179 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 SPACA1Q9HBV2 294 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 RAB6AP20340 208 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 ACHEP22303 614 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 IHHQ14623 411 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 CCSMST1Q4G0I0 132 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 RSPO2Q6UXX9 243 aaPredicted RBP14.54□□□□□ -0.08
PTPN13-204ENST00000436978 A6NHS1 94 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 MRPL19P49406 292 aaKnown RBP14.54□□□□□ -0.08
PTPN13-204ENST00000436978 PRTGQ2VWP7 1150 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 ETFBKMTQ8IXQ9 262 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 SIRT6Q8N6T7 355 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 DRAXINQ8NBI3 349 aaPredicted RBP14.54□□□□□ -0.08
PTPN13-204ENST00000436978 CCDC74BQ96LY2 380 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 C1QTNF3Q9BXJ4 246 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 UBQLN3Q9H347 655 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 TEX101Q9BY14 249 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 C20orf27Q9GZN8 174 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 A0A1W2PPC4 97 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 FIGNL2A6NMB9 653 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 CTXN2P0C2S0 81 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 RAC1P63000 192 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 PRSS35Q8N3Z0 413 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 H0Y8X5 98 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 SOCS6O14544 535 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 SDHAP31040 664 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 SUB1P53999 127 aaKnown RBP eCLIP14.54□□□□□ -0.08
PTPN13-204ENST00000436978 BAXQ07812 192 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 GLYATL3Q5SZD4 288 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 PIWIL3Q7Z3Z3 882 aaKnown RBP14.54□□□□□ -0.08
PTPN13-204ENST00000436978 SARAFQ96BY9 339 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 FRG2CA6NGY1 282 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 BOLA2-SMG1P6H3BVE0 249 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 TEAD1P28347 426 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 DYRK1AQ13627 763 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 MAVSQ7Z434 540 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 RETREG3Q86VR2 466 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 SLC35G3Q8N808 338 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 SLC25A21Q9BQT8 299 aaPredicted RBP14.54□□□□□ -0.08
PTPN13-204ENST00000436978 OR52A5Q9H2C5 316 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 KCNG2Q9UJ96 466 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 FAM166BA8MTA8 275 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 F6UZH7 168 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 LIPCP11150 499 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 ARNTP27540 789 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 GDNFP39905 211 aa14.54□□□□□ -0.08
PTPN13-204ENST00000436978 CPNE4Q96A23 557 aaPredicted RBP14.54□□□□□ -0.08
PTPN13-204ENST00000436978 ZC3HAV1LQ96H79 300 aaKnown RBP14.54□□□□□ -0.08
PTPN13-204ENST00000436978 EDIL3O43854 480 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 IL2RAP01589 272 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 SNRPBP14678 240 aaKnown RBP14.53□□□□□ -0.08
PTPN13-204ENST00000436978 ZNF266Q14584 549 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 ZNF750Q32MQ0 723 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 ZNF321PQ8N8H1 164 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 OR52H1Q8NGJ2 320 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 SMIM3Q9BZL3 60 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 GPR55Q9Y2T6 319 aaPredicted RBP14.53□□□□□ -0.08
PTPN13-204ENST00000436978 OTOFQ9HC10 1997 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 PIPP12273 146 aaPredicted RBP14.53□□□□□ -0.08
PTPN13-204ENST00000436978 GSK3AP49840 483 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 LILRA3Q8N6C8 439 aaPredicted RBP14.53□□□□□ -0.08
PTPN13-204ENST00000436978 OR1N1Q8NGS0 311 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 LIN37Q96GY3 246 aaPredicted RBP14.53□□□□□ -0.08
PTPN13-204ENST00000436978 SDF2Q99470 211 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 GALNT9Q9HCQ5 603 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 CD300AQ9UGN4 299 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 KIR2DS1A0A191URI9 304 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 CLDN1O95832 211 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 KIR2DS4P43632 304 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 SLC6A12P48065 614 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 EDDM3BP56851 147 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 KIR2DS1Q14954 304 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms