RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 SLC35A1P78382 337 aa18.85■□□□□ 0.61
PTPRF-207ENST00000436724 HSF2Q03933 536 aa18.85■□□□□ 0.61
PTPRF-207ENST00000436724 CAMK2DQ13557 499 aa18.85■□□□□ 0.61
PTPRF-207ENST00000436724 CDK5R1Q15078 307 aa18.85■□□□□ 0.61
PTPRF-207ENST00000436724 BAK1Q16611 211 aa18.85■□□□□ 0.61
PTPRF-207ENST00000436724 GALNT16Q8N428 558 aa18.85■□□□□ 0.61
PTPRF-207ENST00000436724 ADPRHL1Q8NDY3 354 aa18.85■□□□□ 0.61
PTPRF-207ENST00000436724 NEIL3Q8TAT5 605 aa18.85■□□□□ 0.61
PTPRF-207ENST00000436724 HSD17B8Q92506 261 aa18.85■□□□□ 0.61
PTPRF-207ENST00000436724 KLHL15Q96M94 604 aa18.85■□□□□ 0.61
PTPRF-207ENST00000436724 IRF2BPLQ9H1B7 796 aa18.85■□□□□ 0.61
PTPRF-207ENST00000436724 ZFP64Q9NPA5 681 aa18.85■□□□□ 0.61
PTPRF-207ENST00000436724 MRM2Q9UI43 246 aaKnown RBP18.85■□□□□ 0.61
PTPRF-207ENST00000436724 CMAHPQ9Y471 501 aa18.85■□□□□ 0.61
PTPRF-207ENST00000436724 A0A087WV48 116 aa18.85■□□□□ 0.61
PTPRF-207ENST00000436724 RGS9O75916 674 aaPredicted RBP18.85■□□□□ 0.61
PTPRF-207ENST00000436724 RPP14O95059 124 aaKnown RBP18.85■□□□□ 0.61
PTPRF-207ENST00000436724 PMS2P2O95744 297 aa18.85■□□□□ 0.61
PTPRF-207ENST00000436724 WT1P19544 449 aaPredicted RBP18.85■□□□□ 0.61
PTPRF-207ENST00000436724 ALOX5APP20292 161 aa18.85■□□□□ 0.61
PTPRF-207ENST00000436724 GDF1P27539 372 aa18.85■□□□□ 0.61
PTPRF-207ENST00000436724 RAC1P63000 192 aa18.85■□□□□ 0.61
PTPRF-207ENST00000436724 TMPRSS7Q7RTY8 843 aa18.85■□□□□ 0.61
PTPRF-207ENST00000436724 RNF166Q96A37 237 aaPredicted RBP18.85■□□□□ 0.61
PTPRF-207ENST00000436724 UCN2Q96RP3 112 aa18.85■□□□□ 0.61
PTPRF-207ENST00000436724 PDCD1LG2Q9BQ51 273 aa18.85■□□□□ 0.61
PTPRF-207ENST00000436724 MIXL1Q9H2W2 232 aa18.85■□□□□ 0.61
PTPRF-207ENST00000436724 ABI3Q9P2A4 366 aa18.85■□□□□ 0.61
PTPRF-207ENST00000436724 POU2F3Q9UKI9 436 aa18.85■□□□□ 0.61
PTPRF-207ENST00000436724 OGG1O15527 345 aa18.84■□□□□ 0.61
PTPRF-207ENST00000436724 EDNRAP25101 427 aa18.84■□□□□ 0.61
PTPRF-207ENST00000436724 CRABP1P29762 137 aa18.84■□□□□ 0.61
PTPRF-207ENST00000436724 STARP49675 285 aa18.84■□□□□ 0.61
PTPRF-207ENST00000436724 H3F3AP84243 136 aa18.84■□□□□ 0.61
PTPRF-207ENST00000436724 HNRNPA0Q13151 305 aaKnown RBP18.84■□□□□ 0.61
PTPRF-207ENST00000436724 OR2M7Q8NG81 312 aa18.84■□□□□ 0.61
PTPRF-207ENST00000436724 OTOSQ8NHW6 89 aa18.84■□□□□ 0.61
PTPRF-207ENST00000436724 SRRQ9GZT4 340 aa18.84■□□□□ 0.61
PTPRF-207ENST00000436724 ABCB9Q9NP78 766 aa18.84■□□□□ 0.61
PTPRF-207ENST00000436724 FRYQ5TBA9 3013 aa18.84■□□□□ 0.61
PTPRF-207ENST00000436724 TRBV2A0A0J9YWF9 115 aa18.83■□□□□ 0.61
PTPRF-207ENST00000436724 SPARCP09486 303 aa18.83■□□□□ 0.61
PTPRF-207ENST00000436724 ZNF43P17038 809 aa18.83■□□□□ 0.61
PTPRF-207ENST00000436724 GDI2P50395 445 aaKnown RBP18.83■□□□□ 0.61
PTPRF-207ENST00000436724 NANOS3P60323 173 aaKnown RBP18.83■□□□□ 0.61
PTPRF-207ENST00000436724 ADAM8P78325 824 aa18.83■□□□□ 0.61
PTPRF-207ENST00000436724 GLO1Q04760 184 aa18.83■□□□□ 0.61
PTPRF-207ENST00000436724 CARD17Q5XLA6 110 aa18.83■□□□□ 0.61
PTPRF-207ENST00000436724 UBQLNLQ8IYU4 475 aa18.83■□□□□ 0.61
PTPRF-207ENST00000436724 ABHD4Q8TB40 342 aa18.83■□□□□ 0.61
PTPRF-207ENST00000436724 NSMAFQ92636 917 aa18.83■□□□□ 0.61
PTPRF-207ENST00000436724 SMIM19Q96E16 107 aa18.83■□□□□ 0.61
PTPRF-207ENST00000436724 OXGR1Q96P68 337 aa18.83■□□□□ 0.61
PTPRF-207ENST00000436724 COQ7Q99807 217 aa18.83■□□□□ 0.61
PTPRF-207ENST00000436724 IKZF2Q9UKS7 526 aa18.83■□□□□ 0.61
PTPRF-207ENST00000436724 CASKO14936 926 aa18.83■□□□□ 0.6
PTPRF-207ENST00000436724 SEC14L5O43304 696 aa18.83■□□□□ 0.6
PTPRF-207ENST00000436724 LIPNQ5VXI9 398 aa18.83■□□□□ 0.6
PTPRF-207ENST00000436724 NRARPQ7Z6K4 114 aa18.83■□□□□ 0.6
PTPRF-207ENST00000436724 SULF2Q8IWU5 870 aa18.83■□□□□ 0.6
PTPRF-207ENST00000436724 NEDD4LQ96PU5 975 aa18.83■□□□□ 0.6
PTPRF-207ENST00000436724 MRPL13Q9BYD1 178 aaKnown RBP18.83■□□□□ 0.6
PTPRF-207ENST00000436724 NCR1O76036 304 aa18.82■□□□□ 0.6
PTPRF-207ENST00000436724 ABHD16AO95870 558 aa18.82■□□□□ 0.6
PTPRF-207ENST00000436724 CAPZA2P47755 286 aa18.82■□□□□ 0.6
PTPRF-207ENST00000436724 RFX2P48378 723 aa18.82■□□□□ 0.6
PTPRF-207ENST00000436724 YIPF7Q8N8F6 280 aa18.82■□□□□ 0.6
PTPRF-207ENST00000436724 SETD6Q8TBK2 473 aa18.82■□□□□ 0.6
PTPRF-207ENST00000436724 MRPL48Q96GC5 212 aaKnown RBP18.82■□□□□ 0.6
PTPRF-207ENST00000436724 SFXN2Q96NB2 322 aa18.82■□□□□ 0.6
PTPRF-207ENST00000436724 FAM173AQ9BQD7 235 aa18.82■□□□□ 0.6
PTPRF-207ENST00000436724 MED18Q9BUE0 208 aa18.82■□□□□ 0.6
PTPRF-207ENST00000436724 SRXN1Q9BYN0 137 aa18.82■□□□□ 0.6
PTPRF-207ENST00000436724 TIGARQ9NQ88 270 aa18.82■□□□□ 0.6
PTPRF-207ENST00000436724 A0A1B0GTH9 108 aa18.82■□□□□ 0.6
PTPRF-207ENST00000436724 UPK3AO75631 287 aa18.82■□□□□ 0.6
PTPRF-207ENST00000436724 CELA3AP09093 270 aa18.82■□□□□ 0.6
PTPRF-207ENST00000436724 ENPP1P22413 925 aa18.82■□□□□ 0.6
PTPRF-207ENST00000436724 ZNF239Q16600 458 aaKnown RBP18.82■□□□□ 0.6
PTPRF-207ENST00000436724 FAM205BPQ63HN1 556 aa18.82■□□□□ 0.6
PTPRF-207ENST00000436724 RPL22L1Q6P5R6 122 aaKnown RBP18.82■□□□□ 0.6
PTPRF-207ENST00000436724 SLCO1C1Q9NYB5 712 aa18.82■□□□□ 0.6
PTPRF-207ENST00000436724 BOKQ9UMX3 212 aaPredicted RBP18.82■□□□□ 0.6
PTPRF-207ENST00000436724 POLHQ9Y253 713 aa18.82■□□□□ 0.6
PTPRF-207ENST00000436724 A0A1W2PPK0 400 aa18.81■□□□□ 0.6
PTPRF-207ENST00000436724 EIF1AYO14602 144 aaKnown RBP18.81■□□□□ 0.6
PTPRF-207ENST00000436724 WNT11O96014 354 aa18.81■□□□□ 0.6
PTPRF-207ENST00000436724 PGA4P0DJD7 388 aa18.81■□□□□ 0.6
PTPRF-207ENST00000436724 PGA3P0DJD8 388 aa18.81■□□□□ 0.6
PTPRF-207ENST00000436724 AZGP1P25311 298 aaKnown RBP18.81■□□□□ 0.6
PTPRF-207ENST00000436724 AGAP6Q5VW22 663 aa18.81■□□□□ 0.6
PTPRF-207ENST00000436724 LRRN1Q6UXK5 716 aa18.81■□□□□ 0.6
PTPRF-207ENST00000436724 CEACAM19Q7Z692 300 aa18.81■□□□□ 0.6
PTPRF-207ENST00000436724 GGNQ86UU5 652 aa18.81■□□□□ 0.6
PTPRF-207ENST00000436724 SLC26A10Q8NG04 563 aa18.81■□□□□ 0.6
PTPRF-207ENST00000436724 AGAP4Q96P64 663 aa18.81■□□□□ 0.6
PTPRF-207ENST00000436724 SMAD5Q99717 465 aaKnown RBP18.81■□□□□ 0.6
PTPRF-207ENST00000436724 KCNN2Q9H2S1 579 aa18.81■□□□□ 0.6
PTPRF-207ENST00000436724 SC5DO75845 299 aa18.81■□□□□ 0.6
PTPRF-207ENST00000436724 KRT8P05787 483 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms