RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 TFP02787 698 aa20.32■□□□□ 0.84
CPSF4-204ENST00000436336 GAAP10253 952 aa20.32■□□□□ 0.84
CPSF4-204ENST00000436336 NAA10P41227 235 aaPredicted RBP20.32■□□□□ 0.84
CPSF4-204ENST00000436336 ZNF84P51523 738 aa20.32■□□□□ 0.84
CPSF4-204ENST00000436336 EIF2S3LQ2VIR3 472 aaKnown RBP20.32■□□□□ 0.84
CPSF4-204ENST00000436336 ALKBH3Q96Q83 286 aaPredicted RBP20.32■□□□□ 0.84
CPSF4-204ENST00000436336 INTS14Q96SY0 518 aa20.32■□□□□ 0.84
CPSF4-204ENST00000436336 MRPL22Q9NWU5 206 aaKnown RBP20.32■□□□□ 0.84
CPSF4-204ENST00000436336 A0A1W2PPL8 197 aa20.31■□□□□ 0.84
CPSF4-204ENST00000436336 KRT33AO76009 404 aa20.31■□□□□ 0.84
CPSF4-204ENST00000436336 HRGP04196 525 aa20.31■□□□□ 0.84
CPSF4-204ENST00000436336 CRHP06850 196 aa20.31■□□□□ 0.84
CPSF4-204ENST00000436336 OR2T7P0C7T2 308 aa20.31■□□□□ 0.84
CPSF4-204ENST00000436336 MYL12AP19105 171 aa20.31■□□□□ 0.84
CPSF4-204ENST00000436336 EDNRAP25101 427 aa20.31■□□□□ 0.84
CPSF4-204ENST00000436336 PER3P56645 1201 aa20.31■□□□□ 0.84
CPSF4-204ENST00000436336 IRF3Q14653 427 aa20.31■□□□□ 0.84
CPSF4-204ENST00000436336 SLC35F2Q8IXU6 374 aa20.31■□□□□ 0.84
CPSF4-204ENST00000436336 ACBD7Q8N6N7 88 aa20.31■□□□□ 0.84
CPSF4-204ENST00000436336 OR2T27Q8NH04 317 aa20.31■□□□□ 0.84
CPSF4-204ENST00000436336 RBM24Q9BX46 236 aaKnown RBP20.31■□□□□ 0.84
CPSF4-204ENST00000436336 C12orf49Q9H741 205 aa20.31■□□□□ 0.84
CPSF4-204ENST00000436336 WDR76Q9H967 626 aa20.31■□□□□ 0.84
CPSF4-204ENST00000436336 CRLF2Q9HC73 371 aa20.31■□□□□ 0.84
CPSF4-204ENST00000436336 INPP5EQ9NRR6 644 aa20.31■□□□□ 0.84
CPSF4-204ENST00000436336 SLC7A10Q9NS82 523 aa20.31■□□□□ 0.84
CPSF4-204ENST00000436336 CHCHD3Q9NX63 227 aaKnown RBP20.31■□□□□ 0.84
CPSF4-204ENST00000436336 UGT2A1Q9Y4X1 527 aa20.31■□□□□ 0.84
CPSF4-204ENST00000436336 C12orf71A8MTZ7 269 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 ATXN7O15265 892 aaPredicted RBP20.3■□□□□ 0.84
CPSF4-204ENST00000436336 IL2RAP01589 272 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 OR3A2P47893 321 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 EMX1Q04741 257 aaPredicted RBP20.3■□□□□ 0.84
CPSF4-204ENST00000436336 STK11Q15831 433 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 FOXL2NBQ6ZUU3 175 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 OR10H4Q8NGA5 316 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 OR6K3Q8NGY3 331 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 MNTQ99583 582 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 YIPF3Q9GZM5 350 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 SEC61A2Q9H9S3 476 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 GPR35Q9HC97 309 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 UPB1Q9UBR1 384 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 NBEAQ8NFP9 2946 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 TOXO94900 526 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 ZNF823P16415 610 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 PCMT1P22061 227 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 KIR2DL2P43627 348 aaPredicted RBP20.3■□□□□ 0.84
CPSF4-204ENST00000436336 SIRPAP78324 504 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 ADAM8P78325 824 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 TBCEQ15813 527 aaPredicted RBP20.3■□□□□ 0.84
CPSF4-204ENST00000436336 KCTD8Q6ZWB6 473 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 LINGO2Q7L985 606 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 RPRMLQ8N4K4 120 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 OR6N2Q8NGY6 317 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 TTYH2Q9BSA4 534 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 VCX3AQ9NNX9 186 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 TAS2R16Q9NYV7 291 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 ERGIC3Q9Y282 383 aa20.3■□□□□ 0.84
CPSF4-204ENST00000436336 INTS1Q8N201 2190 aaKnown RBP20.29■□□□□ 0.84
CPSF4-204ENST00000436336 SPTA1P02549 2419 aa20.29■□□□□ 0.84
CPSF4-204ENST00000436336 RPL36A-HNRNPH2H7BZ11 118 aa20.29■□□□□ 0.84
CPSF4-204ENST00000436336 MPZL1O95297 269 aa20.29■□□□□ 0.84
CPSF4-204ENST00000436336 IGHV3-9P01782 118 aa20.29■□□□□ 0.84
CPSF4-204ENST00000436336 GUCA1AP43080 201 aaPredicted RBP20.29■□□□□ 0.84
CPSF4-204ENST00000436336 ENTPD1P49961 510 aa20.29■□□□□ 0.84
CPSF4-204ENST00000436336 ROR2Q01974 943 aaKnown RBP20.29■□□□□ 0.84
CPSF4-204ENST00000436336 KCNMB1Q16558 191 aa20.29■□□□□ 0.84
CPSF4-204ENST00000436336 C3P1Q6ZMU1 363 aa20.29■□□□□ 0.84
CPSF4-204ENST00000436336 CDC20BQ86Y33 519 aa20.29■□□□□ 0.84
CPSF4-204ENST00000436336 CNEP1R1Q8N9A8 125 aa20.29■□□□□ 0.84
CPSF4-204ENST00000436336 C11orf40Q8WZ69 217 aa20.29■□□□□ 0.84
CPSF4-204ENST00000436336 TBX5Q99593 518 aa20.29■□□□□ 0.84
CPSF4-204ENST00000436336 ACOT13Q9NPJ3 140 aa20.29■□□□□ 0.84
CPSF4-204ENST00000436336 ERVK13-1Q9NX77 482 aa20.29■□□□□ 0.84
CPSF4-204ENST00000436336 TINAGQ9UJW2 476 aa20.29■□□□□ 0.84
CPSF4-204ENST00000436336 DAPL1A0PJW8 107 aa20.28■□□□□ 0.84
CPSF4-204ENST00000436336 ZNF587BE7ETH6 402 aa20.28■□□□□ 0.84
CPSF4-204ENST00000436336 ZNF593O00488 134 aaPredicted RBP20.28■□□□□ 0.84
CPSF4-204ENST00000436336 LIMS3P0CW19 117 aa20.28■□□□□ 0.84
CPSF4-204ENST00000436336 LIMS4P0CW20 117 aa20.28■□□□□ 0.84
CPSF4-204ENST00000436336 TMIGD3P0DMS9 266 aaPredicted RBP20.28■□□□□ 0.84
CPSF4-204ENST00000436336 GLI4P10075 376 aa20.28■□□□□ 0.84
CPSF4-204ENST00000436336 CEACAM8P31997 349 aaPredicted RBP20.28■□□□□ 0.84
CPSF4-204ENST00000436336 CDAP32320 146 aa20.28■□□□□ 0.84
CPSF4-204ENST00000436336 MAP2K4P45985 399 aa20.28■□□□□ 0.84
CPSF4-204ENST00000436336 ETV1P50549 477 aa20.28■□□□□ 0.84
CPSF4-204ENST00000436336 FOXF2Q12947 444 aa20.28■□□□□ 0.84
CPSF4-204ENST00000436336 MEP1BQ16820 701 aa20.28■□□□□ 0.84
CPSF4-204ENST00000436336 CEACAM16Q2WEN9 425 aa20.28■□□□□ 0.84
CPSF4-204ENST00000436336 TEX30Q5JUR7 227 aa20.28■□□□□ 0.84
CPSF4-204ENST00000436336 ABHD12BQ7Z5M8 362 aaPredicted RBP20.28■□□□□ 0.84
CPSF4-204ENST00000436336 OR10H5Q8NGA6 315 aa20.28■□□□□ 0.84
CPSF4-204ENST00000436336 SMAP2Q8WU79 429 aaPredicted RBP20.28■□□□□ 0.84
CPSF4-204ENST00000436336 ZNF837Q96EG3 531 aaPredicted RBP20.28■□□□□ 0.84
CPSF4-204ENST00000436336 ZNF649Q9BS31 505 aa20.28■□□□□ 0.84
CPSF4-204ENST00000436336 NELFAQ9H3P2 528 aa20.28■□□□□ 0.84
CPSF4-204ENST00000436336 POLE4Q9NR33 117 aa20.28■□□□□ 0.84
CPSF4-204ENST00000436336 CLEC2DQ9UHP7 191 aa20.28■□□□□ 0.84
CPSF4-204ENST00000436336 PRSS50Q9UI38 385 aa20.28■□□□□ 0.84
CPSF4-204ENST00000436336 MYL12BO14950 172 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms