RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 ETV1P50549 477 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 TDGF1P3P51864 188 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 BLVRAP53004 296 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 CASP6P55212 293 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 FMODQ06828 376 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 CAMK2DQ13557 499 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 SYT6Q5T7P8 510 aaPredicted RBP10□□□□□ -0.81
LINC00539-203ENST00000434601 LYPD4Q6UWN0 246 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 GFRALQ6UXV0 394 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 NANOGP1Q8N7R0 232 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 OR10H4Q8NGA5 316 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 FNDC8Q8TC99 324 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 RNF128Q8TEB7 428 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 WDYHV1Q96HA8 205 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 ZNF385AQ96PM9 386 aaKnown RBP10□□□□□ -0.81
LINC00539-203ENST00000434601 TIMP4Q99727 224 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 MRPL13Q9BYD1 178 aaKnown RBP10□□□□□ -0.81
LINC00539-203ENST00000434601 PRDM14Q9GZV8 571 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 RBM38Q9H0Z9 239 aaKnown RBP10□□□□□ -0.81
LINC00539-203ENST00000434601 PLSCR2Q9NRY7 297 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 ERVK13-1Q9NX77 482 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 CAMK2AQ9UQM7 478 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 RCE1Q9Y256 329 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 LSM2Q9Y333 95 aaKnown RBP10□□□□□ -0.81
LINC00539-203ENST00000434601 CACNA1CQ13936 2221 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 DAPL1A0PJW8 107 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 KHDRBS3O75525 346 aaKnown RBP9.99□□□□□ -0.81
LINC00539-203ENST00000434601 LIMS3P0CW19 117 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 LIMS4P0CW20 117 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 PTGER4P35408 488 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 CSNK1A1P48729 337 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 WNT4P56705 351 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 RASGEF1BQ0VAM2 473 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 MED22Q15528 200 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 TIGD6Q17RP2 521 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 THEM4Q5T1C6 240 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 CARD17Q5XLA6 110 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 RPTNQ6XPR3 784 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 CHMP1BQ7LBR1 199 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 SLC16A9Q7RTY1 509 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 ERI1Q8IV48 349 aaKnown RBP9.99□□□□□ -0.81
LINC00539-203ENST00000434601 MCEMP1Q8IX19 187 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 SLC35F2Q8IXU6 374 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 TIGD4Q8IY51 512 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 TMEM123Q8N131 208 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 KLHL36Q8N4N3 616 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 ZNF808Q8N4W9 903 aaPredicted RBP9.99□□□□□ -0.81
LINC00539-203ENST00000434601 ZIC4Q8N9L1 334 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 ZNF511Q8NB15 262 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 OR52N1Q8NH53 320 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 ABHD3Q8WU67 409 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 SARAFQ96BY9 339 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 NMD3Q96D46 503 aaKnown RBP9.99□□□□□ -0.81
LINC00539-203ENST00000434601 RBP7Q96R05 134 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 OR2M2Q96R28 347 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 OR5M11Q96RB7 305 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 INTS14Q96SY0 518 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 TBX5Q99593 518 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 ZNF649Q9BS31 505 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 ALG8Q9BVK2 526 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 MARCH7Q9H992 704 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 KLHL9Q9P2J3 617 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 ZNF175Q9Y473 711 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 FLVCR1Q9Y5Y0 555 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 CELSR1Q9NYQ6 3014 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 PDZD2O15018 2839 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 C2CD3Q4AC94 2353 aa9.99□□□□□ -0.81
LINC00539-203ENST00000434601 IGKV3D-15A0A087WSY6 115 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 IGKV1D-43A0A0B4J1Z2 117 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 TRGV8A0A0C4DH27 118 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 TVP23AA6NH52 213 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 CCL21O00585 134 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 GPANK1O95872 356 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 HLA-DQA2P01906 255 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 OR2T7P0C7T2 308 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 GAAP10253 952 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 HSF2Q03933 536 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 GLO1Q04760 184 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 GALEQ14376 348 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 RNPS1Q15287 305 aaKnown RBP9.98□□□□□ -0.81
LINC00539-203ENST00000434601 SPHARQ15513 63 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 HIST3H3Q16695 136 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 OR2G6Q5TZ20 316 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 FOXB2Q5VYV0 432 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 SLC25A47Q6Q0C1 308 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 LHFPL3Q86UP9 236 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 CLVS1Q8IUQ0 354 aaPredicted RBP9.98□□□□□ -0.81
LINC00539-203ENST00000434601 OR6N2Q8NGY6 317 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 OR2T27Q8NH04 317 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 FNDC9Q8TBE3 224 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 ITLN2Q8WWU7 325 aaPredicted RBP9.98□□□□□ -0.81
LINC00539-203ENST00000434601 TMEM54Q969K7 222 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 TMEM45BQ96B21 275 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 COG8Q96MW5 612 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 MNTQ99583 582 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 PRRG4Q9BZD6 226 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 YIPF3Q9GZM5 350 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 EMC3Q9P0I2 261 aa9.98□□□□□ -0.81
LINC00539-203ENST00000434601 ING1Q9UK53 422 aaPredicted RBP9.98□□□□□ -0.81
LINC00539-203ENST00000434601 COA3Q9Y2R0 106 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms