RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 LHFPL3Q86UP9 236 aa16.16■□□□□ 0.18
HMGN1-206ENST00000431390 SLC35F2Q8IXU6 374 aa16.16■□□□□ 0.18
HMGN1-206ENST00000431390 Q8NA96 180 aa16.16■□□□□ 0.18
HMGN1-206ENST00000431390 OR52N1Q8NH53 320 aa16.16■□□□□ 0.18
HMGN1-206ENST00000431390 GP6Q9HCN6 339 aa16.16■□□□□ 0.18
HMGN1-206ENST00000431390 LUZP4Q9P127 313 aa16.16■□□□□ 0.18
HMGN1-206ENST00000431390 FOXD3Q9UJU5 478 aaPredicted RBP16.16■□□□□ 0.18
HMGN1-206ENST00000431390 COA3Q9Y2R0 106 aaPredicted RBP16.16■□□□□ 0.18
HMGN1-206ENST00000431390 IGKV1D-43A0A0B4J1Z2 117 aa16.15■□□□□ 0.18
HMGN1-206ENST00000431390 SLC22A20A6NK97 555 aa16.15■□□□□ 0.18
HMGN1-206ENST00000431390 SLC43A1O75387 559 aa16.15■□□□□ 0.18
HMGN1-206ENST00000431390 AQP8O94778 261 aa16.15■□□□□ 0.18
HMGN1-206ENST00000431390 PSMB9P28065 219 aa16.15■□□□□ 0.18
HMGN1-206ENST00000431390 SELENOPP49908 381 aa16.15■□□□□ 0.18
HMGN1-206ENST00000431390 WNT4P56705 351 aa16.15■□□□□ 0.18
HMGN1-206ENST00000431390 SPHARQ15513 63 aa16.15■□□□□ 0.18
HMGN1-206ENST00000431390 AAED1Q7RTV5 226 aa16.15■□□□□ 0.18
HMGN1-206ENST00000431390 ERI1Q8IV48 349 aaKnown RBP16.15■□□□□ 0.18
HMGN1-206ENST00000431390 C20orf196Q8IYI0 205 aa16.15■□□□□ 0.18
HMGN1-206ENST00000431390 KLHL36Q8N4N3 616 aa16.15■□□□□ 0.18
HMGN1-206ENST00000431390 OR6N1Q8NGY5 312 aa16.15■□□□□ 0.18
HMGN1-206ENST00000431390 MCHR2Q969V1 340 aa16.15■□□□□ 0.18
HMGN1-206ENST00000431390 COG8Q96MW5 612 aa16.15■□□□□ 0.18
HMGN1-206ENST00000431390 INTS14Q96SY0 518 aa16.15■□□□□ 0.18
HMGN1-206ENST00000431390 MYCBPQ99417 103 aaPredicted RBP16.15■□□□□ 0.18
HMGN1-206ENST00000431390 YIPF3Q9GZM5 350 aa16.15■□□□□ 0.18
HMGN1-206ENST00000431390 FAM192AQ9GZU8 254 aa16.15■□□□□ 0.18
HMGN1-206ENST00000431390 CAB39Q9Y376 341 aaPredicted RBP16.15■□□□□ 0.18
HMGN1-206ENST00000431390 HLA-DQA2P01906 255 aa16.14■□□□□ 0.17
HMGN1-206ENST00000431390 HRGP04196 525 aa16.14■□□□□ 0.17
HMGN1-206ENST00000431390 QDPRP09417 244 aa16.14■□□□□ 0.17
HMGN1-206ENST00000431390 HSF2Q03933 536 aa16.14■□□□□ 0.17
HMGN1-206ENST00000431390 MED22Q15528 200 aa16.14■□□□□ 0.17
HMGN1-206ENST00000431390 TIGD6Q17RP2 521 aa16.14■□□□□ 0.17
HMGN1-206ENST00000431390 C10orf128Q5T292 105 aa16.14■□□□□ 0.17
HMGN1-206ENST00000431390 ATCAYQ86WG3 371 aa16.14■□□□□ 0.17
HMGN1-206ENST00000431390 GLB1L2Q8IW92 636 aa16.14■□□□□ 0.17
HMGN1-206ENST00000431390 SLC26A10Q8NG04 563 aa16.14■□□□□ 0.17
HMGN1-206ENST00000431390 OR5M11Q96RB7 305 aa16.14■□□□□ 0.17
HMGN1-206ENST00000431390 TBX5Q99593 518 aa16.14■□□□□ 0.17
HMGN1-206ENST00000431390 ALG8Q9BVK2 526 aa16.14■□□□□ 0.17
HMGN1-206ENST00000431390 CLCF1Q9UBD9 225 aa16.14■□□□□ 0.17
HMGN1-206ENST00000431390 NOSIPQ9Y314 301 aaKnown RBP16.14■□□□□ 0.17
HMGN1-206ENST00000431390 UTP20O75691 2785 aaKnown RBP16.14■□□□□ 0.17
HMGN1-206ENST00000431390 TEX15Q9BXT5 2789 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 A0A1W2PQL4 384 aaPredicted RBP16.13■□□□□ 0.17
HMGN1-206ENST00000431390 TVP23AA6NH52 213 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 AHRRA9YTQ3 701 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 YES1P07947 543 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 GAAP10253 952 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 ZNF85Q03923 595 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 LRFN4Q6PJG9 635 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 TMPRSS11AQ6ZMR5 421 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 CDC20BQ86Y33 519 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 MCEMP1Q8IX19 187 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 ZNF485Q8NCK3 441 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 OR6N2Q8NGY6 317 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 ZNF775Q96BV0 537 aaPredicted RBP16.13■□□□□ 0.17
HMGN1-206ENST00000431390 MRPL48Q96GC5 212 aaKnown RBP16.13■□□□□ 0.17
HMGN1-206ENST00000431390 WDR76Q9H967 626 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 ISYNA1Q9NPH2 558 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 PARPBPQ9NWS1 579 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 MRPL22Q9NWU5 206 aaKnown RBP16.13■□□□□ 0.17
HMGN1-206ENST00000431390 TMEM14AQ9Y6G1 99 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 USP9XQ93008 2570 aaPredicted RBP16.13■□□□□ 0.17
HMGN1-206ENST00000431390 GPANK1O95872 356 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 LAP3P28838 519 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 NTF4P34130 210 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 CAPZA2P47755 286 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 ACTA2P62736 377 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 ACTG2P63267 376 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 SF3B4Q15427 424 aaKnown RBP eCLIP16.13■□□□□ 0.172e-7■■■■□ 20.5
HMGN1-206ENST00000431390 TEX30Q5JUR7 227 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 OR2G6Q5TZ20 316 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 ZNF322Q6U7Q0 402 aaPredicted RBP16.13■□□□□ 0.17
HMGN1-206ENST00000431390 TUSC5Q8IXB3 177 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 TEX19Q8NA77 164 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 NSMAFQ92636 917 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 MGLLQ99685 303 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 RBM38Q9H0Z9 239 aaKnown RBP16.13■□□□□ 0.17
HMGN1-206ENST00000431390 B3GAT2Q9NPZ5 323 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 GLRX2Q9NS18 164 aa16.13■□□□□ 0.17
HMGN1-206ENST00000431390 OR6C65A6NJZ3 312 aa16.12■□□□□ 0.17
HMGN1-206ENST00000431390 ZNF670-ZNF695F2Z2N8 137 aa16.12■□□□□ 0.17
HMGN1-206ENST00000431390 PHYHO14832 338 aa16.12■□□□□ 0.17
HMGN1-206ENST00000431390 MRPL33O75394 65 aaKnown RBP16.12■□□□□ 0.17
HMGN1-206ENST00000431390 TGM6O95932 706 aa16.12■□□□□ 0.17
HMGN1-206ENST00000431390 ZNF823P16415 610 aa16.12■□□□□ 0.17
HMGN1-206ENST00000431390 UQCRFS1P47985 274 aa16.12■□□□□ 0.17
HMGN1-206ENST00000431390 ENTPD1P49961 510 aa16.12■□□□□ 0.17
HMGN1-206ENST00000431390 ARMCX4Q5H9R4 360 aa16.12■□□□□ 0.17
HMGN1-206ENST00000431390 PHYHD1Q5SRE7 291 aa16.12■□□□□ 0.17
HMGN1-206ENST00000431390 RIPPLY2Q5TAB7 128 aa16.12■□□□□ 0.17
HMGN1-206ENST00000431390 PLXDC2Q6UX71 529 aa16.12■□□□□ 0.17
HMGN1-206ENST00000431390 P4HA3Q7Z4N8 544 aa16.12■□□□□ 0.17
HMGN1-206ENST00000431390 FGD2Q7Z6J4 655 aa16.12■□□□□ 0.17
HMGN1-206ENST00000431390 EGFL6Q8IUX8 553 aa16.12■□□□□ 0.17
HMGN1-206ENST00000431390 SMAP2Q8WU79 429 aaPredicted RBP16.12■□□□□ 0.17
HMGN1-206ENST00000431390 ULBP2Q9BZM5 246 aa16.12■□□□□ 0.17
HMGN1-206ENST00000431390 LINC00470Q9BZP3 86 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms