RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 SYT4Q9H2B2 425 aa13.59□□□□□ -0.23
LINC00839-202ENST00000429940 PRTFDC1Q9NRG1 225 aa13.59□□□□□ -0.23
LINC00839-202ENST00000429940 MRPS33Q9Y291 106 aaKnown RBP13.59□□□□□ -0.23
LINC00839-202ENST00000429940 LOC100289279A0A1B0GTE1 492 aa13.58□□□□□ -0.24
LINC00839-202ENST00000429940 ITGB2P05107 769 aa13.58□□□□□ -0.24
LINC00839-202ENST00000429940 MAOAP21397 527 aa13.58□□□□□ -0.24
LINC00839-202ENST00000429940 HNRNPA2B1P22626 353 aaKnown RBP13.58□□□□□ -0.24
LINC00839-202ENST00000429940 TPMTP51580 245 aa13.58□□□□□ -0.24
LINC00839-202ENST00000429940 ACTBP60709 375 aa13.58□□□□□ -0.24
LINC00839-202ENST00000429940 ACTG1P63261 375 aa13.58□□□□□ -0.24
LINC00839-202ENST00000429940 ZMYND11Q15326 602 aa13.58□□□□□ -0.24
LINC00839-202ENST00000429940 EEF1A1P5Q5VTE0 462 aa13.58□□□□□ -0.24
LINC00839-202ENST00000429940 CBLN3Q6UW01 205 aa13.58□□□□□ -0.24
LINC00839-202ENST00000429940 GABRG1Q8N1C3 465 aa13.58□□□□□ -0.24
LINC00839-202ENST00000429940 RELL2Q8NC24 303 aaPredicted RBP13.58□□□□□ -0.24
LINC00839-202ENST00000429940 FBXW5Q969U6 566 aa13.58□□□□□ -0.24
LINC00839-202ENST00000429940 KTI12Q96EK9 354 aaPredicted RBP13.58□□□□□ -0.24
LINC00839-202ENST00000429940 MRPS24Q96EL2 167 aaKnown RBP13.58□□□□□ -0.24
LINC00839-202ENST00000429940 C1orf198Q9H425 327 aa13.58□□□□□ -0.24
LINC00839-202ENST00000429940 UPB1Q9UBR1 384 aa13.58□□□□□ -0.24
LINC00839-202ENST00000429940 KCNG2Q9UJ96 466 aa13.58□□□□□ -0.24
LINC00839-202ENST00000429940 H3BUI4 141 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 SLC17A2O00624 439 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 PHYHO14832 338 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 PMS2P2O95744 297 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 OR4E1P0C645 316 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 CTHP32929 405 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 SSBP1Q04837 148 aaKnown RBP13.57□□□□□ -0.24
LINC00839-202ENST00000429940 SKP2Q13309 424 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 PTCRAQ6ISU1 281 aaPredicted RBP13.57□□□□□ -0.24
LINC00839-202ENST00000429940 ARHGEF39Q8N4T4 335 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 PXT1Q8NFP0 134 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 GPX8Q8TED1 209 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 THRSPQ92748 146 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 ATOH1Q92858 354 aaPredicted RBP13.57□□□□□ -0.24
LINC00839-202ENST00000429940 PMEPA1Q969W9 287 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 ELF4Q99607 663 aaPredicted RBP13.57□□□□□ -0.24
LINC00839-202ENST00000429940 NKX3-1Q99801 234 aaPredicted RBP13.57□□□□□ -0.24
LINC00839-202ENST00000429940 PHF7Q9BWX1 381 aaPredicted RBP13.57□□□□□ -0.24
LINC00839-202ENST00000429940 ALX4Q9H161 411 aaPredicted RBP13.57□□□□□ -0.24
LINC00839-202ENST00000429940 SLC25A32Q9H2D1 315 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 GTF2A1LQ9UNN4 478 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 PIAS3Q9Y6X2 628 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 ARHGEF17Q96PE2 2063 aaPredicted RBP13.57□□□□□ -0.24
LINC00839-202ENST00000429940 TRAV14DV4A0A0A6YYC5 116 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 TMEM82A0PJX8 343 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 HSPB2A8KAH6 182 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 RAD1O60671 282 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 APOC3P02656 99 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 MST1P26927 711 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 TAS2R19P59542 299 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 UBE2IP63279 158 aaKnown RBP13.57□□□□□ -0.24
LINC00839-202ENST00000429940 IGLV3-21P80748 117 aaPredicted RBP13.57□□□□□ -0.24
LINC00839-202ENST00000429940 HSPB2Q16082 182 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 FNDC7Q5VTL7 733 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 OTPQ5XKR4 325 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 MED25Q71SY5 747 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 TMED4Q7Z7H5 227 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 ZNF546Q86UE3 836 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 PM20D2Q8IYS1 436 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 C12orf45Q8N5I9 185 aaPredicted RBP13.57□□□□□ -0.24
LINC00839-202ENST00000429940 OTOSQ8NHW6 89 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 SLC37A2Q8TED4 501 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 POTEKPQ9BYX7 375 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 ELOVL3Q9HB03 270 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 SLC17A5Q9NRA2 495 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 MPDZO75970 2070 aa13.57□□□□□ -0.24
LINC00839-202ENST00000429940 SPTBP11277 2137 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 A0A1B0GW55 424 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 CLDN4O14493 209 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 KLF8O95600 359 aaPredicted RBP13.56□□□□□ -0.24
LINC00839-202ENST00000429940 RAB3DO95716 219 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 UBBP0CG47 229 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 UBCP0CG48 685 aaKnown RBP13.56□□□□□ -0.24
LINC00839-202ENST00000429940 DUX4L2P0CJ85 424 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 DUX4L3P0CJ86 424 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 DUX4L4P0CJ87 422 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 DUX4L5P0CJ88 424 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 DUX4L6P0CJ89 424 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 DUX4L7P0CJ90 424 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 ICAM2P13598 275 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 MGMTP16455 207 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 IL32P24001 234 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 RPS27AP62979 156 aaKnown RBP13.56□□□□□ -0.24
LINC00839-202ENST00000429940 UBA52P62987 128 aaKnown RBP13.56□□□□□ -0.24
LINC00839-202ENST00000429940 FUT7Q11130 342 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 LY6G6FQ5SQ64 297 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 ZNF615Q8N8J6 731 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 PLPP7Q8NBV4 271 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 ST8SIA2Q92186 375 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 SLC38A3Q99624 504 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 SEMA6CQ9H3T2 930 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 UBQLN4Q9NRR5 601 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 DUX4Q9UBX2 424 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 WDR87Q6ZQQ6 2873 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 HLA-DQA2P01906 255 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 ACHEP22303 614 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 SMAD2Q15796 467 aaKnown RBP13.56□□□□□ -0.24
LINC00839-202ENST00000429940 MEP1BQ16820 701 aa13.56□□□□□ -0.24
LINC00839-202ENST00000429940 TMEM31Q5JXX7 168 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms