RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 MRM2Q9UI43 246 aaKnown RBP6.81□□□□□ -1.32
LINC01108-201ENST00000427276 NOSIPQ9Y314 301 aaKnown RBP6.81□□□□□ -1.32
LINC01108-201ENST00000427276 TRBV23-1A0A0A0MS06 115 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 A0A0B4J2E0 115 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 A0A1B0GX12 115 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 OTOL1A6NHN0 477 aaPredicted RBP6.81□□□□□ -1.32
LINC01108-201ENST00000427276 ZNF208O43345 1280 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 ITGA5P08648 1049 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 PI3P19957 117 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 PEBP1P30086 187 aaKnown RBP6.81□□□□□ -1.32
LINC01108-201ENST00000427276 FOXK1P85037 733 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 DHODHQ02127 395 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 DPTQ07507 201 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 IKZF1Q13422 519 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 HFEQ30201 348 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 DMRTC1Q5HYR2 192 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 KRBOX4Q5JUW0 171 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 EXOSC6Q5RKV6 272 aaKnown RBP6.81□□□□□ -1.32
LINC01108-201ENST00000427276 C11orf87Q6NUJ2 197 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 ZNF584Q8IVC4 421 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 MFSD9Q8NBP5 474 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 NPEPL1Q8NDH3 523 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 CCL4L1Q8NHW4 92 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 STOML3Q8TAV4 291 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 NUBPLQ8TB37 319 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 PHOSPHO1Q8TCT1 267 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 C15orf40Q8WUR7 153 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 GAL3ST3Q96A11 431 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 CMBLQ96DG6 245 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 PIGMQ9H3S5 423 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 ELOVL3Q9HB03 270 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 MED9Q9NWA0 146 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 LRIT1Q9P2V4 623 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 CHRNA9Q9UGM1 479 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 NDRG3Q9UGV2 375 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 ATXN7L1Q9ULK2 861 aaPredicted RBP6.81□□□□□ -1.32
LINC01108-201ENST00000427276 DAPP1Q9UN19 280 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 FRMPD3Q5JV73 1810 aa6.81□□□□□ -1.32
LINC01108-201ENST00000427276 OR6C65A6NJZ3 312 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 LINC00587B1AMM8 73 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 FBXO24O75426 580 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 EIF1AXP47813 144 aaKnown RBP6.8□□□□□ -1.32
LINC01108-201ENST00000427276 DNASE1L1P49184 302 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 HOXA1P49639 335 aaPredicted RBP6.8□□□□□ -1.32
LINC01108-201ENST00000427276 S100A10P60903 97 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 ALG10Q5BKT4 473 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 RNASE10Q5GAN6 216 aaKnown RBP6.8□□□□□ -1.32
LINC01108-201ENST00000427276 NKAPLQ5M9Q1 402 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 AVPI1Q5T686 147 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 NKAIN2Q5VXU1 208 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 LHX8Q68G74 356 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 ULK3Q6PHR2 472 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 RBMS3Q6XE24 437 aaKnown RBP6.8□□□□□ -1.32
LINC01108-201ENST00000427276 OR1J4Q8NGS1 313 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 OR2G2Q8NGZ5 317 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 FAM174AQ8TBP5 190 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 ELP5Q8TE02 316 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 CCDC74AQ96AQ1 378 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 C10orf90Q96M02 699 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 C20orf24Q9BUV8 137 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 HAO2Q9NYQ3 351 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 CTSFQ9UBX1 484 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 MSRAQ9UJ68 235 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 KCNG2Q9UJ96 466 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 C19orf53Q9UNZ5 99 aaPredicted RBP6.8□□□□□ -1.32
LINC01108-201ENST00000427276 ENTPD2Q9Y5L3 495 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 SPEGQ15772 3267 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 KIF26BQ2KJY2 2108 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 HRKO00198 91 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 BCL2L11O43521 198 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 OR2T1O43869 369 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 CTSVO60911 334 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 RNGTTO60942 597 aaKnown RBP6.8□□□□□ -1.32
LINC01108-201ENST00000427276 RDH16O75452 317 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 GLCEO94923 617 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 PMS2P2O95744 297 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 EML2O95834 649 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 TAS2R19P59542 299 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 ACTBP60709 375 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 ACTG1P63261 375 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 TGIF1Q15583 401 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 SLC9A3R2Q15599 337 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 ZNF77Q15935 545 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 MEP1BQ16820 701 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 FAM209BQ5JX69 171 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 JMJD6Q6NYC1 403 aaPredicted RBP6.8□□□□□ -1.32
LINC01108-201ENST00000427276 ZNF585AQ6P3V2 769 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 ETV3LQ6ZN32 361 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 MDGA2Q7Z553 956 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 GVQW1Q8N7I0 195 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 ZNF615Q8N8J6 731 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 ZNF417Q8TAU3 575 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 RXFP4Q8TDU9 374 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 ARL11Q969Q4 196 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 TSACCQ96A04 125 aaPredicted RBP6.8□□□□□ -1.32
LINC01108-201ENST00000427276 CKLFQ9UBR5 152 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 SLC27A6Q9Y2P4 619 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 ARHGEF17Q96PE2 2063 aaPredicted RBP6.8□□□□□ -1.32
LINC01108-201ENST00000427276 COL4A3Q01955 1670 aa6.8□□□□□ -1.32
LINC01108-201ENST00000427276 CPED1A4D0V7 1026 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms