RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 CD14P08571 375 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 ARFIP1P53367 373 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 BTG1P62324 171 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 CHAF1BQ13112 559 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 OR7A5Q15622 319 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 AANATQ16613 207 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 SLC22A6Q4U2R8 563 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 ZNF248Q8NDW4 579 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 GPR148Q8TDV2 347 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 NUDCD2Q8WVJ2 157 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 TMEM41AQ96HV5 264 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 G6PC3Q9BUM1 346 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 MOKQ9UQ07 419 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 IGHV5-51A0A0C4DH38 117 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 AIPO00170 330 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 ZNHIT1O43257 154 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 ZNF264O43296 627 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 IFNA6P05013 189 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 CD2P06729 351 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 FAM157BP0CG42 384 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 CT45A8P0DMV1 189 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 CT45A9P0DMV2 189 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 CXCL2P19875 107 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 FAUP35544 74 aaKnown RBP12.1□□□□□ -0.47
USP42-203ENST00000426246 MMP15P51511 669 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 RAB38P57729 211 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 CXADRP78310 365 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 C2orf76Q3KRA6 126 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 CT45A2Q5DJT8 189 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 PWWP2BQ6NUJ5 590 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 TMEM88Q6PEY1 159 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 FAM180AQ6UWF9 173 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 COX15Q7KZN9 410 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 SLC35F3Q8IY50 421 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 MUC20Q8N307 709 aaPredicted RBP12.1□□□□□ -0.47
USP42-203ENST00000426246 GVQW1Q8N7I0 195 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 OR13C3Q8NGS6 347 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 RBPMSQ93062 196 aaKnown RBP12.1□□□□□ -0.47
USP42-203ENST00000426246 CLDN23Q96B33 292 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 FAM71F1Q96KD3 344 aaPredicted RBP12.1□□□□□ -0.47
USP42-203ENST00000426246 EMC7Q9NPA0 242 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 ZNF205O95201 554 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 CYB5AP00167 134 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 ACSM4P0C7M7 580 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 HLA-DOBP13765 273 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 SPINK2P20155 84 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 GMFBP60983 142 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 POU4F2Q12837 409 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 OR2G2Q8NGZ5 317 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 RGP1Q92546 391 aaPredicted RBP12.1□□□□□ -0.47
USP42-203ENST00000426246 RTN4RQ9BZR6 473 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 TMEM231Q9H6L2 316 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 SDHAF2Q9NX18 166 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 CHRNA9Q9UGM1 479 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 ACOT7O00154 380 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 TNFSF14O43557 240 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 GLCEO94923 617 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 CD1CP29017 333 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 BAMBIQ13145 260 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 LANCL3Q6ZV70 420 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 OR13C9Q8NGT0 318 aa12.1□□□□□ -0.47
USP42-203ENST00000426246 OR5K3A6NET4 321 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 C19orf67A6NJJ6 358 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 F5H0A9 414 aaPredicted RBP12.09□□□□□ -0.47
USP42-203ENST00000426246 TPOP07202 933 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 IL11P20809 199 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 AVPR2P30518 371 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 NUDT1P36639 197 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 RPS11P62280 158 aaKnown RBP eCLIP12.09□□□□□ -0.47
USP42-203ENST00000426246 POU3F1Q03052 451 aaPredicted RBP12.09□□□□□ -0.47
USP42-203ENST00000426246 TRAM1Q15629 374 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 ACKR1Q16570 336 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 WDR38Q5JTN6 314 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 TIGD3Q6B0B8 471 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 C3orf33Q6P1S2 294 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 FAM199XQ6PEV8 388 aaPredicted RBP12.09□□□□□ -0.47
USP42-203ENST00000426246 STK35Q8TDR2 534 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 FAM3DQ96BQ1 224 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 ZNF524Q96C55 264 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 MED30Q96HR3 178 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 SOSTQ9BQB4 213 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 POFUT1Q9H488 388 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 B3GNT2Q9NY97 397 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 MED11Q9P086 117 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 F5H5P2 479 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 H3BUI4 141 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 SCRN3Q0VDG4 424 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 RAB11BQ15907 218 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 TUSC1Q2TAM9 212 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 DPY19L2P2Q6ZN68 376 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 ZNF546Q86UE3 836 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 ZNF454Q8N9F8 522 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 ZNF764Q96H86 408 aaPredicted RBP12.09□□□□□ -0.47
USP42-203ENST00000426246 CYYR1Q96J86 154 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 SLX1AQ9BQ83 275 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 LRRC61Q9BV99 259 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 SAV1Q9H4B6 383 aaPredicted RBP12.09□□□□□ -0.47
USP42-203ENST00000426246 MYO7BQ6PIF6 2116 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 TMEM131Q92545 1883 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms