RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 CBR4Q8N4T8 237 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 CYB561A3Q8NBI2 242 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 PIK3IP1Q96FE7 263 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 PLPPR2Q96GM1 343 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 SEC61A2Q9H9S3 476 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 SLC25A19Q9HC21 320 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 SRA1Q9HD15 236 aaKnown RBP21.36■■□□□ 1.01
VEGFA-209ENST00000425836 RPRD1BQ9NQG5 326 aaKnown RBP21.36■■□□□ 1.01
VEGFA-209ENST00000425836 CMC2Q9NRP2 79 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 RASSF1Q9NS23 344 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 USE1Q9NZ43 259 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 B9D1Q9UPM9 204 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 COA3Q9Y2R0 106 aaPredicted RBP21.36■■□□□ 1.01
VEGFA-209ENST00000425836 A0A1W2PPL8 197 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 DPRXA6NFQ7 191 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 FARS2O95363 451 aaKnown RBP21.36■■□□□ 1.01
VEGFA-209ENST00000425836 ALPLP05186 524 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 CRABP1P29762 137 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 CRMP1Q14194 572 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 PTGES3Q15185 160 aaKnown RBP21.36■■□□□ 1.01
VEGFA-209ENST00000425836 SGCAQ16586 387 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 FGFBP3Q8TAT2 258 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 FOXN4Q96NZ1 517 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 C9orf16Q9BUW7 83 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 FN3KQ9H479 309 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 ASH1LQ9NR48 2969 aaKnown RBP21.35■■□□□ 1.01
VEGFA-209ENST00000425836 IGLV1-36A0A0B4J1U3 117 aa21.35■■□□□ 1.01
VEGFA-209ENST00000425836 IFNGP01579 166 aa21.35■■□□□ 1.01
VEGFA-209ENST00000425836 SCG5P05408 212 aa21.35■■□□□ 1.01
VEGFA-209ENST00000425836 CD79AP11912 226 aa21.35■■□□□ 1.01
VEGFA-209ENST00000425836 EPHA2P29317 976 aa21.35■■□□□ 1.01
VEGFA-209ENST00000425836 NCMAPQ5T1S8 102 aa21.35■■□□□ 1.01
VEGFA-209ENST00000425836 DNM1P34Q6PK57 102 aa21.35■■□□□ 1.01
VEGFA-209ENST00000425836 ZNF771Q7L3S4 317 aaPredicted RBP21.35■■□□□ 1.01
VEGFA-209ENST00000425836 MDP1Q86V88 176 aa21.35■■□□□ 1.01
VEGFA-209ENST00000425836 HS3ST6Q96QI5 342 aa21.35■■□□□ 1.01
VEGFA-209ENST00000425836 NOX3Q9HBY0 568 aa21.35■■□□□ 1.01
VEGFA-209ENST00000425836 RIIAD1A6NNX1 92 aa21.34■■□□□ 1.01
VEGFA-209ENST00000425836 MGRN1O60291 552 aa21.34■■□□□ 1.01
VEGFA-209ENST00000425836 HMGN1P05114 100 aa21.34■■□□□ 1.01
VEGFA-209ENST00000425836 PATE4P0C8F1 98 aa21.34■■□□□ 1.01
VEGFA-209ENST00000425836 CBR1P16152 277 aa21.34■■□□□ 1.01
VEGFA-209ENST00000425836 PAX7P23759 505 aa21.34■■□□□ 1.01
VEGFA-209ENST00000425836 LAP3P28838 519 aa21.34■■□□□ 1.01
VEGFA-209ENST00000425836 GUCA1AP43080 201 aaPredicted RBP21.34■■□□□ 1.01
VEGFA-209ENST00000425836 ALDH3A2P51648 485 aa21.34■■□□□ 1.01
VEGFA-209ENST00000425836 PIGFQ07326 219 aa21.34■■□□□ 1.01
VEGFA-209ENST00000425836 FAM27BQ5VT28 67 aa21.34■■□□□ 1.01
VEGFA-209ENST00000425836 SLC16A14Q7RTX9 510 aa21.34■■□□□ 1.01
VEGFA-209ENST00000425836 ZBTB46Q86UZ6 589 aa21.34■■□□□ 1.01
VEGFA-209ENST00000425836 GLB1L2Q8IW92 636 aa21.34■■□□□ 1.01
VEGFA-209ENST00000425836 LRRC18Q8N456 261 aa21.34■■□□□ 1.01
VEGFA-209ENST00000425836 FAM169BQ8N8A8 192 aa21.34■■□□□ 1.01
VEGFA-209ENST00000425836 NANOS1Q8WY41 292 aaKnown RBP21.34■■□□□ 1.01
VEGFA-209ENST00000425836 SLC29A1Q99808 456 aa21.34■■□□□ 1.01
VEGFA-209ENST00000425836 ESRP2Q9H6T0 727 aaKnown RBP21.34■■□□□ 1.01
VEGFA-209ENST00000425836 POLE4Q9NR33 117 aa21.34■■□□□ 1.01
VEGFA-209ENST00000425836 CRNNQ9UBG3 495 aaPredicted RBP21.34■■□□□ 1.01
VEGFA-209ENST00000425836 ENOPH1Q9UHY7 261 aa21.34■■□□□ 1.01
VEGFA-209ENST00000425836 FKBP7Q9Y680 259 aa21.34■■□□□ 1.01
VEGFA-209ENST00000425836 M0R1B8 84 aa21.33■■□□□ 1.01
VEGFA-209ENST00000425836 UBL3O95164 117 aa21.33■■□□□ 1.01
VEGFA-209ENST00000425836 POLR2IP36954 125 aaKnown RBP21.33■■□□□ 1.01
VEGFA-209ENST00000425836 NR1H2P55055 460 aa21.33■■□□□ 1.01
VEGFA-209ENST00000425836 BSPH1Q075Z2 132 aa21.33■■□□□ 1.01
VEGFA-209ENST00000425836 ZBTB49Q6ZSB9 765 aa21.33■■□□□ 1.01
VEGFA-209ENST00000425836 EME1Q96AY2 570 aa21.33■■□□□ 1.01
VEGFA-209ENST00000425836 GABARAPL3Q9BY60 117 aa21.33■■□□□ 1.01
VEGFA-209ENST00000425836 RACGAP1Q9H0H5 632 aa21.33■■□□□ 1.01
VEGFA-209ENST00000425836 SURF4O15260 269 aa21.32■■□□□ 1
VEGFA-209ENST00000425836 RRP9O43818 475 aaKnown RBP21.32■■□□□ 1
VEGFA-209ENST00000425836 IGKV3-15P01624 115 aa21.32■■□□□ 1
VEGFA-209ENST00000425836 ZNF3P17036 446 aa21.32■■□□□ 1
VEGFA-209ENST00000425836 MSR1P21757 451 aa21.32■■□□□ 1
VEGFA-209ENST00000425836 RAB1AP62820 205 aa21.32■■□□□ 1
VEGFA-209ENST00000425836 NPRL3Q12980 569 aa21.32■■□□□ 1
VEGFA-209ENST00000425836 GSG1Q2KHT4 349 aa21.32■■□□□ 1
VEGFA-209ENST00000425836 FBXW10Q5XX13 1052 aa21.32■■□□□ 1
VEGFA-209ENST00000425836 TEX12Q9BXU0 123 aa21.32■■□□□ 1
VEGFA-209ENST00000425836 NMNAT2Q9BZQ4 307 aa21.32■■□□□ 1
VEGFA-209ENST00000425836 CLEC4MQ9H2X3 399 aaPredicted RBP21.32■■□□□ 1
VEGFA-209ENST00000425836 MOV10Q9HCE1 1003 aaKnown RBP21.32■■□□□ 1
VEGFA-209ENST00000425836 NBPF19A0A087WUL8 3843 aa21.32■■□□□ 1
VEGFA-209ENST00000425836 A0A1W2PPR1 153 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 ZAR1LA6NP61 321 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 FAM171A2A8MVW0 826 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 MPZL1O95297 269 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 GPANK1O95872 356 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 IGLV1-44P01699 117 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 CD40P25942 277 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 ARR3P36575 388 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 UGT2A3Q6UWM9 527 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 TMEM108Q6UXF1 575 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 DPPA2Q7Z7J5 298 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 TMEM200AQ86VY9 491 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 OR9Q1Q8NGQ5 310 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 ZNRF4Q8WWF5 429 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 ZNF75AQ96N20 296 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 RIBC2Q9H4K1 309 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 EMC7Q9NPA0 242 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms