RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 TICRRQ7Z2Z1 1910 aa12.22□□□□□ -0.45
LRCH3-203ENST00000425562 RNF222A6NCQ9 220 aa12.22□□□□□ -0.45
LRCH3-203ENST00000425562 IGKV1D-16P01601 117 aa12.22□□□□□ -0.45
LRCH3-203ENST00000425562 CA3P07451 260 aa12.22□□□□□ -0.45
LRCH3-203ENST00000425562 PGAM2P15259 253 aa12.22□□□□□ -0.45
LRCH3-203ENST00000425562 PSMD4P55036 377 aaKnown RBP12.22□□□□□ -0.45
LRCH3-203ENST00000425562 PAN3Q58A45 887 aaKnown RBP12.22□□□□□ -0.45
LRCH3-203ENST00000425562 TMEM240Q5SV17 173 aa12.22□□□□□ -0.45
LRCH3-203ENST00000425562 RPL13AP3Q6NVV1 102 aa12.22□□□□□ -0.45
LRCH3-203ENST00000425562 SVBPQ8N300 66 aa12.22□□□□□ -0.45
LRCH3-203ENST00000425562 GTPBP8Q8N3Z3 284 aaPredicted RBP12.22□□□□□ -0.45
LRCH3-203ENST00000425562 CCDC74AQ96AQ1 378 aa12.22□□□□□ -0.45
LRCH3-203ENST00000425562 SPAG17Q6Q759 2223 aa12.22□□□□□ -0.45
LRCH3-203ENST00000425562 MPTX1A8MV57 137 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 GPRIN2O60269 458 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 CSF1P09603 554 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 GDI1P31150 447 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 ID4P47928 161 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 DEFB110Q30KQ9 67 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 ZNF528Q3MIS6 628 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 ATPAF1Q5TC12 328 aaPredicted RBP12.21□□□□□ -0.45
LRCH3-203ENST00000425562 C1orf53Q5VUE5 145 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 JAZF1Q86VZ6 243 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 BPIFB2Q8N4F0 458 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 POMGNT2Q8NAT1 580 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 ZSCAN1Q8NBB4 408 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 SFT2D1Q8WV19 159 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 FAM3DQ96BQ1 224 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 MOGAT1Q96PD6 335 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 SPSB2Q99619 263 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 CMKLR1Q99788 373 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 SLC6A7Q99884 636 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 KLHDC3Q9BQ90 382 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 APOOQ9BUR5 198 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 SRMSQ9H3Y6 488 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 ICAM5Q9UMF0 924 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 ENTPD2Q9Y5L3 495 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 A0A1B0GW55 424 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 C11orf98E9PRG8 122 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 SULT1B1O43704 296 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 CTSBP07858 339 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 DUX4L2P0CJ85 424 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 DUX4L3P0CJ86 424 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 DUX4L4P0CJ87 422 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 DUX4L5P0CJ88 424 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 DUX4L6P0CJ89 424 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 DUX4L7P0CJ90 424 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 ACTR1BP42025 376 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 ACAA2P42765 397 aaKnown RBP12.21□□□□□ -0.45
LRCH3-203ENST00000425562 ACTR1AP61163 376 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 SPOCK1Q08629 439 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 ZNF542PQ5EBM4 170 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 FBXO42Q6P3S6 717 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 EIF4E3Q8N5X7 224 aaKnown RBP12.21□□□□□ -0.45
LRCH3-203ENST00000425562 MFSD9Q8NBP5 474 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 ELP5Q8TE02 316 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 ZBTB8AQ96BR9 441 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 NIT2Q9NQR4 276 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 LRIT1Q9P2V4 623 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 DUX4Q9UBX2 424 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 NDRG3Q9UGV2 375 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 TMED7Q9Y3B3 224 aa12.21□□□□□ -0.45
LRCH3-203ENST00000425562 MED12Q93074 2177 aa12.21□□□□□ -0.46
LRCH3-203ENST00000425562 ZNF749O43361 778 aa12.21□□□□□ -0.46
LRCH3-203ENST00000425562 UPK3AO75631 287 aa12.21□□□□□ -0.46
LRCH3-203ENST00000425562 ACAA1P09110 424 aaPredicted RBP12.21□□□□□ -0.46
LRCH3-203ENST00000425562 SLC35G6P0C7Q6 338 aa12.21□□□□□ -0.46
LRCH3-203ENST00000425562 PI3P19957 117 aa12.21□□□□□ -0.46
LRCH3-203ENST00000425562 PTGFRP43088 359 aa12.21□□□□□ -0.46
LRCH3-203ENST00000425562 ARFIP1P53367 373 aa12.21□□□□□ -0.46
LRCH3-203ENST00000425562 CTXN1P60606 82 aa12.21□□□□□ -0.46
LRCH3-203ENST00000425562 CDNFQ49AH0 187 aa12.21□□□□□ -0.46
LRCH3-203ENST00000425562 C11orf87Q6NUJ2 197 aa12.21□□□□□ -0.46
LRCH3-203ENST00000425562 SLC29A4Q7RTT9 530 aa12.21□□□□□ -0.46
LRCH3-203ENST00000425562 TMPRSS9Q7Z410 1059 aa12.21□□□□□ -0.46
LRCH3-203ENST00000425562 YAF2Q8IY57 180 aa12.21□□□□□ -0.46
LRCH3-203ENST00000425562 SPAG16Q8N0X2 631 aa12.21□□□□□ -0.46
LRCH3-203ENST00000425562 JAGN1Q8N5M9 183 aa12.21□□□□□ -0.46
LRCH3-203ENST00000425562 ZNF784Q8NCA9 323 aaPredicted RBP12.21□□□□□ -0.46
LRCH3-203ENST00000425562 OR51A2Q8NGJ7 313 aa12.21□□□□□ -0.46
LRCH3-203ENST00000425562 ZNF764Q96H86 408 aaPredicted RBP12.21□□□□□ -0.46
LRCH3-203ENST00000425562 SPACA7Q96KW9 195 aa12.21□□□□□ -0.46
LRCH3-203ENST00000425562 FAM117AQ9C073 453 aa12.21□□□□□ -0.46
LRCH3-203ENST00000425562 MKKSQ9NPJ1 570 aaPredicted RBP12.21□□□□□ -0.46
LRCH3-203ENST00000425562 BIN3Q9NQY0 253 aa12.21□□□□□ -0.46
LRCH3-203ENST00000425562 ZNF629Q9UEG4 869 aaPredicted RBP12.21□□□□□ -0.46
LRCH3-203ENST00000425562 GPN3Q9UHW5 284 aaPredicted RBP12.21□□□□□ -0.46
LRCH3-203ENST00000425562 KCNG2Q9UJ96 466 aa12.21□□□□□ -0.46
LRCH3-203ENST00000425562 KIF26BQ2KJY2 2108 aa12.2□□□□□ -0.46
LRCH3-203ENST00000425562 TXNL1O43396 289 aa12.2□□□□□ -0.46
LRCH3-203ENST00000425562 OR10H2O60403 315 aa12.2□□□□□ -0.46
LRCH3-203ENST00000425562 THBS1P07996 1170 aa12.2□□□□□ -0.46
LRCH3-203ENST00000425562 FREM3P0C091 2139 aa12.2□□□□□ -0.46
LRCH3-203ENST00000425562 CALCBP10092 127 aa12.2□□□□□ -0.46
LRCH3-203ENST00000425562 TLX1P31314 330 aaPredicted RBP12.2□□□□□ -0.46
LRCH3-203ENST00000425562 CASRP41180 1078 aa12.2□□□□□ -0.46
LRCH3-203ENST00000425562 PRKXP51817 358 aa12.2□□□□□ -0.46
LRCH3-203ENST00000425562 GLYATL3Q5SZD4 288 aa12.2□□□□□ -0.46
LRCH3-203ENST00000425562 CLEC1AQ8NC01 280 aa12.2□□□□□ -0.46
LRCH3-203ENST00000425562 OR2G2Q8NGZ5 317 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms