RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 LRIF1Q5T3J3 769 aa10.43□□□□□ -0.74
HLA-DQB3-203ENST00000425319 BTNL3Q6UXE8 466 aa10.43□□□□□ -0.74
HLA-DQB3-203ENST00000425319 C1orf229Q6ZS94 237 aaPredicted RBP10.43□□□□□ -0.74
HLA-DQB3-203ENST00000425319 PATL1Q86TB9 770 aaKnown RBP10.43□□□□□ -0.74
HLA-DQB3-203ENST00000425319 LRRC17Q8N6Y2 441 aa10.43□□□□□ -0.74
HLA-DQB3-203ENST00000425319 ZDHHC22Q8N966 263 aa10.43□□□□□ -0.74
HLA-DQB3-203ENST00000425319 SYT14Q8NB59 555 aa10.43□□□□□ -0.74
HLA-DQB3-203ENST00000425319 C22orf15Q8WYQ4 148 aa10.43□□□□□ -0.74
HLA-DQB3-203ENST00000425319 COG8Q96MW5 612 aa10.43□□□□□ -0.74
HLA-DQB3-203ENST00000425319 DCLRE1CQ96SD1 692 aaKnown RBP10.43□□□□□ -0.74
HLA-DQB3-203ENST00000425319 TAS2R5Q9NYW4 299 aa10.43□□□□□ -0.74
HLA-DQB3-203ENST00000425319 CCDC167Q9P0B6 97 aa10.43□□□□□ -0.74
HLA-DQB3-203ENST00000425319 NPTNQ9Y639 398 aa10.43□□□□□ -0.74
HLA-DQB3-203ENST00000425319 A0A1B0GUS0 222 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 C5orf49A4QMS7 147 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 CPSF4LA6NMK7 179 aaKnown RBP10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 LRRN3E7EW58 273 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 H3BSA7 217 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 IFNL4K9M1U5 179 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 M0QX08 132 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 TIMM8AO60220 97 aaPredicted RBP10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 DEAF1O75398 565 aaPredicted RBP10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 MFN2O95140 757 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 PGA4P0DJD7 388 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 PGA3P0DJD8 388 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 ACADSP16219 412 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 SLC18A1P54219 525 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 TNFAIP6P98066 277 aaPredicted RBP10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 GLO1Q04760 184 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 MELKQ14680 651 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 TAF11Q15544 211 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 ESCO2Q56NI9 601 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 PABPC1L2AQ5JQF8 200 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 TREML4Q6UXN2 200 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 NHLRC1Q6VVB1 395 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 LINC00114Q6XXX2 140 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 WDR88Q6ZMY6 472 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 DOK3Q7L591 496 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 ZNF584Q8IVC4 421 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 SIGLECL1Q8N7X8 197 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 SMYD1Q8NB12 490 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 OR9I1Q8NGQ6 314 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 FGFBP3Q8TAT2 258 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 ADAMTS16Q8TE57 1224 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 TSPAN32Q96QS1 320 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 INIPQ9NRY2 104 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 OR5V1Q9UGF6 321 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 PURGQ9UJV8 347 aaKnown RBP10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 SLC7A7Q9UM01 511 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 TRIM33Q9UPN9 1127 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 TIMM10BQ9Y5J6 103 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 USH1CQ9Y6N9 552 aa10.42□□□□□ -0.74
HLA-DQB3-203ENST00000425319 HTR3EA5X5Y0 456 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 KPNA4O00629 521 aaPredicted RBP10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 IFNA14P01570 189 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 IGHV1-46P01743 117 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 FUT1P19526 365 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 PPP1CBP62140 327 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 MRPS34P82930 218 aaKnown RBP10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 DEFA6Q01524 100 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 CD47Q08722 323 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 MPP2Q14168 576 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 TMEM155Q4W5P6 130 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 ZNF362Q5T0B9 420 aaPredicted RBP10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 MBNL2Q5VZF2 373 aaKnown RBP10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 SLC27A4Q6P1M0 643 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 BLOC1S3Q6QNY0 202 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 EPGNQ6UW88 154 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 ZNF771Q7L3S4 317 aaPredicted RBP10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 MUC20Q8N307 709 aaPredicted RBP10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 OR52E2Q8NGJ4 325 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 ABHD4Q8TB40 342 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 KLF14Q8TD94 323 aaPredicted RBP10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 ZDHHC16Q969W1 377 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 THOC1Q96FV9 657 aaKnown RBP10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 PLEKHA8Q96JA3 519 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 SAMD8Q96LT4 415 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 OR52B2Q96RD2 323 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 WACQ9BTA9 647 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 SLITRK2Q9H156 845 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 UNKLQ9H9P5 680 aaKnown RBP10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 SMURF2Q9HAU4 748 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 MAN2C1Q9NTJ4 1040 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 KIF17Q9P2E2 1029 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 EGFL7Q9UHF1 273 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 IL20RAQ9UHF4 553 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 GMEB1Q9Y692 573 aa10.41□□□□□ -0.74
HLA-DQB3-203ENST00000425319 C12orf71A8MTZ7 269 aa10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 M0R3H8 397 aa10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 KCNAB3O43448 404 aa10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 IGHMP01871 453 aa10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 ADH4P08319 380 aa10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 MAKP20794 623 aa10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 MRPL19P49406 292 aaKnown RBP10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 ERVS71-1P61550 626 aa10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 ZNF154Q13106 437 aa10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 PDLIM3Q53GG5 364 aaPredicted RBP10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 AGKQ53H12 422 aa10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 TTMPQ5BVD1 217 aa10.4□□□□□ -0.74
HLA-DQB3-203ENST00000425319 MTX3Q5HYI7 312 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms