RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 PIWIL4Q7Z3Z4 852 aaKnown RBP3.15□□□□□ -1.91
SF3B1-205ENST00000424674 CEACAM19Q7Z692 300 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 TMED4Q7Z7H5 227 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 MYPOPQ86VE0 399 aaPredicted RBP3.15□□□□□ -1.91
SF3B1-205ENST00000424674 CALHM1Q8IU99 346 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 LINC01561Q8N1V8 128 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 ABHD12Q8N2K0 398 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 EID2Q8N6I1 236 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 SLC37A3Q8NCC5 494 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 OR1S2Q8NGQ3 325 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 OR2V1Q8NHB1 315 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 SLC7A13Q8TCU3 470 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 ZPLD1Q8TCW7 415 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 SETD7Q8WTS6 366 aaKnown RBP3.15□□□□□ -1.91
SF3B1-205ENST00000424674 NELFBQ8WX92 580 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 TOMM40LQ969M1 308 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 PPWD1Q96BP3 646 aaKnown RBP3.15□□□□□ -1.91
SF3B1-205ENST00000424674 RILPQ96NA2 401 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 HBEGFQ99075 208 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 EPYCQ99645 322 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 ZNF670Q9BS34 389 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 CABLES2Q9BTV7 478 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 ULBP1Q9BZM6 244 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 DSN1Q9H410 356 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 GLIPR2Q9H4G4 154 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 FNDC4Q9H6D8 234 aaPredicted RBP3.15□□□□□ -1.91
SF3B1-205ENST00000424674 GAREM1Q9H706 876 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 BEX1Q9HBH7 125 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 EML4Q9HC35 981 aaKnown RBP3.15□□□□□ -1.91
SF3B1-205ENST00000424674 ISYNA1Q9NPH2 558 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 AGPAT4Q9NRZ5 378 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 GID8Q9NWU2 228 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 RAB26Q9ULW5 256 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 TCF19Q9Y242 345 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 ERGIC3Q9Y282 383 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 SMARCA2P51531 1590 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 ZNF532Q9HCE3 1301 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 TRAV8-7A0A075B6U6 113 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.14□□□□□ -1.91
SF3B1-205ENST00000424674 LY6G6EA0A0G2JKS1 128 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 A0A1B0GTH9 108 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 A0A1W2PRG6 482 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 FAM231BA6NCW3 169 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 OR5H15A6NDH6 313 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 VSTM2BA6NLU5 285 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 GJE1A6NN92 205 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 C2orf74A8MZ97 194 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 HACD1B0YJ81 288 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 ANHXE9PGG2 379 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 H7C2Y5 167 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 K7EN84 100 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 SLC1A7O00341 560 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 HSD17B6O14756 317 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 INPP4BO15327 924 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 XPNPEP2O43895 674 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 CDC40O60508 579 aaKnown RBP eCLIP3.14□□□□□ -1.91
SF3B1-205ENST00000424674 TRAPPC6AO75865 159 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 SOX30O94993 753 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 RAB36O95755 333 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 LSM8O95777 96 aaKnown RBP3.14□□□□□ -1.91
SF3B1-205ENST00000424674 LGALS2P05162 132 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 FGF1P05230 155 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 RPLP0P05388 317 aaKnown RBP3.14□□□□□ -1.91
SF3B1-205ENST00000424674 MELTFP08582 738 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 CCDC166P0CW27 439 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 MYOD1P15172 320 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 LOXP28300 417 aaPredicted RBP3.14□□□□□ -1.91
SF3B1-205ENST00000424674 SERPINB1P30740 379 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 ELK3P41970 407 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 ZFP36L2P47974 494 aaKnown RBP3.14□□□□□ -1.91
SF3B1-205ENST00000424674 HILS1P60008 231 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 PSME3P61289 254 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 RHOAP61586 193 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 RPS13P62277 151 aaKnown RBP3.14□□□□□ -1.91
SF3B1-205ENST00000424674 DHODHQ02127 395 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 MLLT11Q13015 90 aaPredicted RBP3.14□□□□□ -1.91
SF3B1-205ENST00000424674 ASAH1Q13510 395 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 RAB31Q13636 194 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 PON3Q15166 354 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 TWIST1Q15672 202 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 PSMD5Q16401 504 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 FAM106AQ4KMX7 169 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 SPANXN4Q5MJ08 99 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 WASHC2DQ5SRD0 308 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 CCNJQ5T5M9 372 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 CPTPQ5TA50 214 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 HACD4Q5VWC8 232 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 PARM1Q6UWI2 310 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 ZNF793Q6ZN11 406 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 ASB18Q6ZVZ8 466 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 DND1Q8IYX4 353 aaKnown RBP3.14□□□□□ -1.91
SF3B1-205ENST00000424674 PDIK1LQ8N165 341 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 LRRC52Q8N7C0 313 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 MAPKAPK5-AS1Q8N8E1 139 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 C12orf29Q8N999 325 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 OR2T12Q8NG77 320 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 OR10Z1Q8NGY1 313 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 OR6F1Q8NGZ6 308 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 OR51F2Q8NH61 342 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 SPPL2AQ8TCT8 520 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms