RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 TPK1Q9H3S4 243 aa13.08□□□□□ -0.32
USB1-202ENST00000423271 DENND2DQ9H6A0 471 aaPredicted RBP13.08□□□□□ -0.32
USB1-202ENST00000423271 MYOZ1Q9NP98 299 aaPredicted RBP13.08□□□□□ -0.32
USB1-202ENST00000423271 IL1RAPQ9NPH3 570 aa13.08□□□□□ -0.32
USB1-202ENST00000423271 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.08□□□□□ -0.32
USB1-202ENST00000423271 SLC7A8Q9UHI5 535 aa13.08□□□□□ -0.32
USB1-202ENST00000423271 FZR1Q9UM11 496 aa13.08□□□□□ -0.32
USB1-202ENST00000423271 POMPQ9Y244 141 aa13.08□□□□□ -0.32
USB1-202ENST00000423271 A0A087WUU8 490 aa13.07□□□□□ -0.32
USB1-202ENST00000423271 A0A1W2PRG6 482 aa13.07□□□□□ -0.32
USB1-202ENST00000423271 MCIDASD6RGH6 385 aa13.07□□□□□ -0.32
USB1-202ENST00000423271 EBAG9O00559 213 aa13.07□□□□□ -0.32
USB1-202ENST00000423271 TRMUO75648 421 aaKnown RBP13.07□□□□□ -0.32
USB1-202ENST00000423271 IGF2P01344 180 aa13.07□□□□□ -0.32
USB1-202ENST00000423271 H1F0P07305 194 aaKnown RBP13.07□□□□□ -0.32
USB1-202ENST00000423271 OR8G3PP0DMU2 310 aa13.07□□□□□ -0.32
USB1-202ENST00000423271 DAOP14920 347 aa13.07□□□□□ -0.32
USB1-202ENST00000423271 SPIBQ01892 262 aa13.07□□□□□ -0.32
USB1-202ENST00000423271 FLOT2Q14254 428 aa13.07□□□□□ -0.32
USB1-202ENST00000423271 HIST3H3Q16695 136 aa13.07□□□□□ -0.32
USB1-202ENST00000423271 CHRFAM7AQ494W8 412 aa13.07□□□□□ -0.32
USB1-202ENST00000423271 FGD3Q5JSP0 725 aa13.07□□□□□ -0.32
USB1-202ENST00000423271 TBPL2Q6SJ96 375 aa13.07□□□□□ -0.32
USB1-202ENST00000423271 LRP11Q86VZ4 500 aa13.07□□□□□ -0.32
USB1-202ENST00000423271 MEX3DQ86XN8 651 aaKnown RBP13.07□□□□□ -0.32
USB1-202ENST00000423271 NRMQ8IXM6 262 aa13.07□□□□□ -0.32
USB1-202ENST00000423271 SLC7A13Q8TCU3 470 aa13.07□□□□□ -0.32
USB1-202ENST00000423271 ACOT11Q8WXI4 607 aaPredicted RBP13.07□□□□□ -0.32
USB1-202ENST00000423271 DHRS1Q96LJ7 313 aa13.07□□□□□ -0.32
USB1-202ENST00000423271 KCNK17Q96T54 332 aa13.07□□□□□ -0.32
USB1-202ENST00000423271 MRPL13Q9BYD1 178 aaKnown RBP13.07□□□□□ -0.32
USB1-202ENST00000423271 ANKRD19PQ9H560 264 aa13.07□□□□□ -0.32
USB1-202ENST00000423271 INIPQ9NRY2 104 aa13.07□□□□□ -0.32
USB1-202ENST00000423271 MYEF2Q9P2K5 600 aaKnown RBP13.07□□□□□ -0.32
USB1-202ENST00000423271 FBXO9Q9UK97 447 aaPredicted RBP13.07□□□□□ -0.32
USB1-202ENST00000423271 A0A1W2PRQ8 180 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 AQP12BA6NM10 295 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 LYNX1G3V0Z9 82 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 FARS2O95363 451 aaKnown RBP13.06□□□□□ -0.32
USB1-202ENST00000423271 SLC2A10O95528 541 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 SERPINA5P05154 406 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 TSPAN19P0C672 248 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 LYNX1P0DP58 116 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 IFI30P13284 250 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 APEHP13798 732 aaKnown RBP13.06□□□□□ -0.32
USB1-202ENST00000423271 ACADSP16219 412 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 GLRXP35754 106 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 ALDH3B1P43353 468 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 GZMKP49863 264 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 DAP3P51398 398 aaKnown RBP13.06□□□□□ -0.32
USB1-202ENST00000423271 GALK2Q01415 458 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 DGCR6Q14129 220 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 LAPTM4AQ15012 233 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 MAD2L1BPQ15013 274 aaPredicted RBP13.06□□□□□ -0.32
USB1-202ENST00000423271 ARMC4Q5T2S8 1044 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 PODNL1Q6PEZ8 512 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 ZNF730Q6ZMV8 503 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 ASRGL1Q7L266 308 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 AQP12AQ8IXF9 295 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 ADGRG5Q8IZF4 528 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 PAQR4Q8N4S7 273 aaPredicted RBP13.06□□□□□ -0.32
USB1-202ENST00000423271 ARIH2OSQ8N7S6 290 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 OR52J3Q8NH60 311 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 NEU4Q8WWR8 484 aaPredicted RBP13.06□□□□□ -0.32
USB1-202ENST00000423271 LIPHQ8WWY8 451 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 HDAC2Q92769 488 aaKnown RBP13.06□□□□□ -0.32
USB1-202ENST00000423271 MSI2Q96DH6 328 aaKnown RBP13.06□□□□□ -0.32
USB1-202ENST00000423271 SOX7Q9BT81 388 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 MAGIXQ9H6Y5 334 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 FBXL3Q9UKT7 428 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 SPEF1Q9Y4P9 236 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 STAB1Q9NY15 2570 aa13.06□□□□□ -0.32
USB1-202ENST00000423271 IGKV1D-43A0A0B4J1Z2 117 aa13.05□□□□□ -0.32
USB1-202ENST00000423271 TRBV4-1A0A0J9YWV2 114 aa13.05□□□□□ -0.32
USB1-202ENST00000423271 LRP5LA4QPB2 252 aa13.05□□□□□ -0.32
USB1-202ENST00000423271 SYNGR3O43761 229 aa13.05□□□□□ -0.32
USB1-202ENST00000423271 ERCC1P07992 297 aaPredicted RBP13.05□□□□□ -0.32
USB1-202ENST00000423271 CCL2P13500 99 aa13.05□□□□□ -0.32
USB1-202ENST00000423271 ZNF23P17027 643 aa13.05□□□□□ -0.32
USB1-202ENST00000423271 MAKP20794 623 aa13.05□□□□□ -0.32
USB1-202ENST00000423271 IGFBP5P24593 272 aa13.05□□□□□ -0.32
USB1-202ENST00000423271 RRM2P31350 389 aa13.05□□□□□ -0.32
USB1-202ENST00000423271 MAGEA2P43356 314 aa13.05□□□□□ -0.32
USB1-202ENST00000423271 ERFP50548 548 aa13.05□□□□□ -0.32
USB1-202ENST00000423271 PRKCDQ05655 676 aa13.05□□□□□ -0.32
USB1-202ENST00000423271 FMODQ06828 376 aa13.05□□□□□ -0.32
USB1-202ENST00000423271 TOP3AQ13472 1001 aaPredicted RBP13.05□□□□□ -0.32
USB1-202ENST00000423271 SEC23BQ15437 767 aa13.05□□□□□ -0.32
USB1-202ENST00000423271 FAM98BQ52LJ0 330 aaKnown RBP13.05□□□□□ -0.32
USB1-202ENST00000423271 MBOAT2Q6ZWT7 520 aa13.05□□□□□ -0.32
USB1-202ENST00000423271 CXXC5Q7LFL8 322 aaKnown RBP13.05□□□□□ -0.32
USB1-202ENST00000423271 SLC16A14Q7RTX9 510 aa13.05□□□□□ -0.32
USB1-202ENST00000423271 SPATA24Q86W54 205 aa13.05□□□□□ -0.32
USB1-202ENST00000423271 RNF113BQ8IZP6 322 aaKnown RBP13.05□□□□□ -0.32
USB1-202ENST00000423271 SLC30A7Q8NEW0 376 aa13.05□□□□□ -0.32
USB1-202ENST00000423271 POP5Q969H6 163 aaKnown RBP13.05□□□□□ -0.32
USB1-202ENST00000423271 NMD3Q96D46 503 aaKnown RBP13.05□□□□□ -0.32
USB1-202ENST00000423271 BPIFA2Q96DR5 249 aa13.05□□□□□ -0.32
USB1-202ENST00000423271 FUZQ9BT04 418 aa13.05□□□□□ -0.32
USB1-202ENST00000423271 OR51B6Q9H340 312 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms