RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 TBX1O43435 398 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 MPZL1O95297 269 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 CELA3AP09093 270 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 GAAP10253 952 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 STARP49675 285 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 SUCLG1P53597 346 aaKnown RBP18.67■□□□□ 0.58
GPC1-202ENST00000420138 CSNK2A1P68400 391 aaPredicted RBP18.67■□□□□ 0.58
GPC1-202ENST00000420138 SIRPAP78324 504 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 MXD1Q05195 221 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 CDK5R1Q15078 307 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 MEP1BQ16820 701 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 GALNTL5Q7Z4T8 443 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 LYSMD2Q8IV50 215 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 SLC26A10Q8NG04 563 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 HAS2Q92819 552 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 SLC25A44Q96H78 314 aaPredicted RBP18.67■□□□□ 0.58
GPC1-202ENST00000420138 SLC30A2Q9BRI3 323 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 TPK1Q9H3S4 243 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 POLHQ9Y253 713 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 SPTBN2O15020 2390 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 SHISA3A0PJX4 238 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 CD8B2A6NJW9 211 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 ZNF593O00488 134 aaPredicted RBP18.67■□□□□ 0.58
GPC1-202ENST00000420138 UPK3AO75631 287 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 SC5DO75845 299 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 GLSO94925 669 aaPredicted RBP18.67■□□□□ 0.58
GPC1-202ENST00000420138 CD8BP10966 210 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 ZNF43P17038 809 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 ENPP1P22413 925 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 TNFSF8P32971 234 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 GBX2P52951 348 aaPredicted RBP18.67■□□□□ 0.58
GPC1-202ENST00000420138 RAC3P60763 192 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 GLO1Q04760 184 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 SLC3A1Q07837 685 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 CDC20Q12834 499 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 POU4F3Q15319 338 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 HIST3H3Q16695 136 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 ASB18Q6ZVZ8 466 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 ZNF554Q86TJ5 538 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 LAMP5Q9UJQ1 280 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 MSRB2Q9Y3D2 182 aa18.67■□□□□ 0.58
GPC1-202ENST00000420138 SMAD9O15198 467 aaKnown RBP18.66■□□□□ 0.58
GPC1-202ENST00000420138 DNPH1O43598 174 aa18.66■□□□□ 0.58
GPC1-202ENST00000420138 HLA-DQA2P01906 255 aa18.66■□□□□ 0.58
GPC1-202ENST00000420138 CLEC2LP0C7M8 214 aa18.66■□□□□ 0.58
GPC1-202ENST00000420138 OR8G3PP0DMU2 310 aa18.66■□□□□ 0.58
GPC1-202ENST00000420138 SDC2P34741 201 aa18.66■□□□□ 0.58
GPC1-202ENST00000420138 PSMB10P40306 273 aa18.66■□□□□ 0.58
GPC1-202ENST00000420138 BCAP31P51572 246 aa18.66■□□□□ 0.58
GPC1-202ENST00000420138 CAMK2DQ13557 499 aa18.66■□□□□ 0.58
GPC1-202ENST00000420138 SLC17A1Q14916 467 aa18.66■□□□□ 0.58
GPC1-202ENST00000420138 DNM1P34Q6PK57 102 aa18.66■□□□□ 0.58
GPC1-202ENST00000420138 EGFL6Q8IUX8 553 aa18.66■□□□□ 0.58
GPC1-202ENST00000420138 NOXO1Q8NFA2 376 aa18.66■□□□□ 0.58
GPC1-202ENST00000420138 SNRNP27Q8WVK2 155 aaKnown RBP18.66■□□□□ 0.58
GPC1-202ENST00000420138 GHSRQ92847 366 aa18.66■□□□□ 0.58
GPC1-202ENST00000420138 SMIM19Q96E16 107 aa18.66■□□□□ 0.58
GPC1-202ENST00000420138 MRPL48Q96GC5 212 aaKnown RBP18.66■□□□□ 0.58
GPC1-202ENST00000420138 ZFHX4Q86UP3 3567 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 EIF1AYO14602 144 aaKnown RBP18.65■□□□□ 0.58
GPC1-202ENST00000420138 RGS5O15539 181 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 TLX3O43711 291 aaPredicted RBP18.65■□□□□ 0.58
GPC1-202ENST00000420138 NANOS3P60323 173 aaKnown RBP18.65■□□□□ 0.58
GPC1-202ENST00000420138 HNRNPA0Q13151 305 aaKnown RBP18.65■□□□□ 0.58
GPC1-202ENST00000420138 HYAL4Q2M3T9 481 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 CCDC58Q4VC31 144 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 RPL22L1Q6P5R6 122 aaKnown RBP18.65■□□□□ 0.58
GPC1-202ENST00000420138 ESPNLQ6ZVH7 1005 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 CREB3L2Q70SY1 520 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 SLC22A16Q86VW1 577 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 TMEM251Q8N6I4 163 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 FDCSPQ8NFU4 85 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 SCMH1Q96GD3 660 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 WDFY2Q96P53 400 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 PPIL3Q9H2H8 161 aaKnown RBP18.65■□□□□ 0.58
GPC1-202ENST00000420138 KLF13Q9Y2Y9 288 aaPredicted RBP18.65■□□□□ 0.58
GPC1-202ENST00000420138 TMEM14AQ9Y6G1 99 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 CENPBD1B2RD01 187 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 EFSO43281 561 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 KHDRBS3O75525 346 aaKnown RBP18.65■□□□□ 0.58
GPC1-202ENST00000420138 RGS9O75916 674 aaPredicted RBP18.65■□□□□ 0.58
GPC1-202ENST00000420138 VAMP5O95183 116 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 IGHG1P01857 330 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 CD1AP06126 327 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 MAGEA5P43359 124 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 TGM4P49221 684 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 MEOX1P50221 254 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 EGR3Q06889 387 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 PCK2Q16822 640 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 THEM4Q5T1C6 240 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 STEAP3Q658P3 488 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 LRRC69Q6ZNQ3 347 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 KCTD20Q7Z5Y7 419 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 ZIC4Q8N9L1 334 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 DRAXINQ8NBI3 349 aaPredicted RBP18.65■□□□□ 0.58
GPC1-202ENST00000420138 ABHD4Q8TB40 342 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 HSD17B8Q92506 261 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 NAA11Q9BSU3 229 aaPredicted RBP18.65■□□□□ 0.58
GPC1-202ENST00000420138 B4GALT7Q9UBV7 327 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 PLEKHB1Q9UF11 243 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms