RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 HMGA2P52926 109 aa17.77■□□□□ 0.44
PKNOX1-202ENST00000418336 LCN6P62502 163 aa17.77■□□□□ 0.44
PKNOX1-202ENST00000418336 MXRA7P84157 204 aa17.77■□□□□ 0.44
PKNOX1-202ENST00000418336 THEM4Q5T1C6 240 aa17.77■□□□□ 0.44
PKNOX1-202ENST00000418336 KRT80Q6KB66 452 aa17.77■□□□□ 0.44
PKNOX1-202ENST00000418336 VHLLQ6RSH7 139 aa17.77■□□□□ 0.44
PKNOX1-202ENST00000418336 CDK20Q8IZL9 346 aa17.77■□□□□ 0.44
PKNOX1-202ENST00000418336 CPEB3Q8NE35 698 aaKnown RBP17.77■□□□□ 0.44
PKNOX1-202ENST00000418336 NSMAFQ92636 917 aa17.77■□□□□ 0.44
PKNOX1-202ENST00000418336 RSRC1Q96IZ7 334 aaKnown RBP17.77■□□□□ 0.44
PKNOX1-202ENST00000418336 FBXL3Q9UKT7 428 aa17.77■□□□□ 0.44
PKNOX1-202ENST00000418336 CHD3Q12873 2000 aaKnown RBP17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 RNF223E7ERA6 249 aa17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 ACOT8O14734 319 aa17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 NDUFB2O95178 105 aa17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 GADD45GO95257 159 aa17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 TXNDC12O95881 172 aa17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 F12P00748 615 aaPredicted RBP17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 RRM2P31350 389 aa17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 EFNA4P52798 201 aa17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 SPIBQ01892 262 aa17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 CHRNB3Q05901 458 aa17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 CD47Q08722 323 aa17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 DAG1Q14118 895 aa17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 ENDOGQ14249 297 aaKnown RBP17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 TRIM25Q14258 630 aaKnown RBP17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 FAM27BQ5VT28 67 aa17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 Q71RC1 249 aaPredicted RBP17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 SLC16A14Q7RTX9 510 aa17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 DPPA2Q7Z7J5 298 aa17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 ZDHHC21Q8IVQ6 265 aa17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 LRRC18Q8N456 261 aa17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 ZNF525Q8N782 197 aa17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 MAPK1IP1LQ8NDC0 245 aa17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 OR4C15Q8NGM1 316 aa17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 CLPTM1LQ96KA5 538 aa17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 REG4Q9BYZ8 158 aa17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 MRPL37Q9BZE1 423 aaKnown RBP17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 IL20RAQ9UHF4 553 aa17.76■□□□□ 0.43
PKNOX1-202ENST00000418336 UNC119BA6NIH7 251 aa17.75■□□□□ 0.43
PKNOX1-202ENST00000418336 A6NIZ1 184 aa17.75■□□□□ 0.43
PKNOX1-202ENST00000418336 FARS2O95363 451 aaKnown RBP17.75■□□□□ 0.43
PKNOX1-202ENST00000418336 CCL2P13500 99 aa17.75■□□□□ 0.43
PKNOX1-202ENST00000418336 NPR2P20594 1047 aa17.75■□□□□ 0.43
PKNOX1-202ENST00000418336 GSSP48637 474 aa17.75■□□□□ 0.43
PKNOX1-202ENST00000418336 PPOXP50336 477 aa17.75■□□□□ 0.43
PKNOX1-202ENST00000418336 RAP1BP61224 184 aa17.75■□□□□ 0.43
PKNOX1-202ENST00000418336 RAP1AP62834 184 aa17.75■□□□□ 0.43
PKNOX1-202ENST00000418336 RAB35Q15286 201 aa17.75■□□□□ 0.43
PKNOX1-202ENST00000418336 ZNF770Q6IQ21 691 aaPredicted RBP17.75■□□□□ 0.43
PKNOX1-202ENST00000418336 CLEC9AQ6UXN8 241 aa17.75■□□□□ 0.43
PKNOX1-202ENST00000418336 PTCHD4Q6ZW05 846 aa17.75■□□□□ 0.43
PKNOX1-202ENST00000418336 FNDC8Q8TC99 324 aa17.75■□□□□ 0.43
PKNOX1-202ENST00000418336 MRPL24Q96A35 216 aaKnown RBP17.75■□□□□ 0.43
PKNOX1-202ENST00000418336 RASD2Q96D21 266 aa17.75■□□□□ 0.43
PKNOX1-202ENST00000418336 POM121Q96HA1 1249 aa17.75■□□□□ 0.43
PKNOX1-202ENST00000418336 VNN3Q9NY84 501 aa17.75■□□□□ 0.43
PKNOX1-202ENST00000418336 VSX1Q9NZR4 365 aaPredicted RBP17.75■□□□□ 0.43
PKNOX1-202ENST00000418336 LYVE1Q9Y5Y7 322 aa17.75■□□□□ 0.43
PKNOX1-202ENST00000418336 SVEP1Q4LDE5 3571 aa17.75■□□□□ 0.43
PKNOX1-202ENST00000418336 TEX13CA0A0J9YWL9 993 aa17.74■□□□□ 0.43
PKNOX1-202ENST00000418336 PRSS37A4D1T9 235 aa17.74■□□□□ 0.43
PKNOX1-202ENST00000418336 SNAP29O95721 258 aa17.74■□□□□ 0.43
PKNOX1-202ENST00000418336 CTLA4P16410 223 aa17.74■□□□□ 0.43
PKNOX1-202ENST00000418336 ZNF32P17041 273 aa17.74■□□□□ 0.43
PKNOX1-202ENST00000418336 FPR3P25089 353 aa17.74■□□□□ 0.43
PKNOX1-202ENST00000418336 SDHAP31040 664 aa17.74■□□□□ 0.43
PKNOX1-202ENST00000418336 GLRXP35754 106 aa17.74■□□□□ 0.43
PKNOX1-202ENST00000418336 NUDT6P53370 316 aa17.74■□□□□ 0.43
PKNOX1-202ENST00000418336 SLC36A2Q495M3 483 aa17.74■□□□□ 0.43
PKNOX1-202ENST00000418336 C1orf94Q6P1W5 598 aa17.74■□□□□ 0.43
PKNOX1-202ENST00000418336 PGBD2Q6P3X8 592 aa17.74■□□□□ 0.43
PKNOX1-202ENST00000418336 UGT2A3Q6UWM9 527 aa17.74■□□□□ 0.43
PKNOX1-202ENST00000418336 RRM2BQ7LG56 351 aa17.74■□□□□ 0.43
PKNOX1-202ENST00000418336 SVOPLQ8N434 492 aa17.74■□□□□ 0.43
PKNOX1-202ENST00000418336 SLC30A7Q8NEW0 376 aa17.74■□□□□ 0.43
PKNOX1-202ENST00000418336 SLC7A6OSQ96CW6 309 aaPredicted RBP17.74■□□□□ 0.43
PKNOX1-202ENST00000418336 WNT5BQ9H1J7 359 aa17.74■□□□□ 0.43
PKNOX1-202ENST00000418336 MUC13Q9H3R2 512 aa17.74■□□□□ 0.43
PKNOX1-202ENST00000418336 MYEF2Q9P2K5 600 aaKnown RBP17.74■□□□□ 0.43
PKNOX1-202ENST00000418336 PRPF19Q9UMS4 504 aaKnown RBP17.74■□□□□ 0.43
PKNOX1-202ENST00000418336 PMF1-BGLAPU3KQ54 211 aa17.74■□□□□ 0.43
PKNOX1-202ENST00000418336 YLPM1P49750 1951 aaKnown RBP17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 LOC100509620A0A075B734 347 aa17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 VWC2LB2RUY7 222 aa17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 AHCYL1O43865 530 aa17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 ENTPD5O75356 428 aa17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 LAP3P28838 519 aa17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 RPL4P36578 427 aaKnown RBP17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 CDKN2AP42771 156 aaKnown RBP17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 EVX1P49640 407 aa17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 SMIM11AP58511 58 aa17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 SNRPD2P62316 118 aaKnown RBP17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 PSG4Q00888 419 aa17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 MTX3Q5HYI7 312 aa17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 PABPC1L2AQ5JQF8 200 aa17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 PGM2L1Q6PCE3 622 aa17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 DPY19L2P2Q6ZN68 376 aa17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 TRPM8Q7Z2W7 1104 aa17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 LRP11Q86VZ4 500 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms