RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 OR51L1Q8NGJ5 315 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 OR1K1Q8NGR3 316 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 OR2AJ1Q8NGZ0 328 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 TRUB1Q8WWH5 349 aaKnown RBP7.45□□□□□ -1.22
TRIM48-201ENST00000417545 TSSK2Q96PF2 358 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 PITX2Q99697 317 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 MED18Q9BUE0 208 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 MRPL13Q9BYD1 178 aaKnown RBP7.45□□□□□ -1.22
TRIM48-201ENST00000417545 ACTR6Q9GZN1 396 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 RACGAP1Q9H0H5 632 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 HINT3Q9NQE9 182 aaKnown RBP7.45□□□□□ -1.22
TRIM48-201ENST00000417545 DNAJC27Q9NZQ0 273 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 NDRG3Q9UGV2 375 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 B9D1Q9UPM9 204 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 MOKQ9UQ07 419 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 COA3Q9Y2R0 106 aaPredicted RBP7.45□□□□□ -1.22
TRIM48-201ENST00000417545 NCOA6Q14686 2063 aaPredicted RBP7.45□□□□□ -1.22
TRIM48-201ENST00000417545 SLC22A31A6NKX4 558 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 C12orf71A8MTZ7 269 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 PRSS44E7EML9 344 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 RPL36A-HNRNPH2H7BZ11 118 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 GLCEO94923 617 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 RAB36O95755 333 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 CLIC3O95833 236 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 ITGA5P08648 1049 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 OR8G3PP0DMU2 310 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 PPP3CBP16298 524 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 COX5AP20674 150 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 GSTT1P30711 240 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 CDAP32320 146 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 PEX19P40855 299 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 PCBD1P61457 104 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 ADAM8P78325 824 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 HSF2Q03933 536 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 FAM27E3Q08E93 113 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 SLC36A2Q495M3 483 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 SLC35D3Q5M8T2 416 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 ZNF691Q5VV52 312 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 NXNL2Q5VZ03 156 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 ZNF474Q6S9Z5 364 aaPredicted RBP7.44□□□□□ -1.22
TRIM48-201ENST00000417545 NHLRC1Q6VVB1 395 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 ERI1Q8IV48 349 aaKnown RBP7.44□□□□□ -1.22
TRIM48-201ENST00000417545 WDFY1Q8IWB7 410 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 GABRG1Q8N1C3 465 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 LRRC18Q8N456 261 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 C17orf78Q8N4C9 275 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 ZNF433Q8N7K0 673 aaPredicted RBP7.44□□□□□ -1.22
TRIM48-201ENST00000417545 OR52N5Q8NH56 324 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 ZMYND19Q96E35 227 aaPredicted RBP7.44□□□□□ -1.22
TRIM48-201ENST00000417545 ZC3HAV1LQ96H79 300 aaKnown RBP7.44□□□□□ -1.22
TRIM48-201ENST00000417545 CNBD2Q96M20 576 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 MUS81Q96NY9 551 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 KCNS3Q9BQ31 491 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 USB1Q9BQ65 265 aaKnown RBP7.44□□□□□ -1.22
TRIM48-201ENST00000417545 NELFAQ9H3P2 528 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 TMEM38BQ9NVV0 291 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 NDRG4Q9ULP0 352 aaKnown RBP7.44□□□□□ -1.22
TRIM48-201ENST00000417545 RAB26Q9ULW5 256 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.44□□□□□ -1.22
TRIM48-201ENST00000417545 AMDHD2Q9Y303 409 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 HSPE1-MOB4S4R3N1 261 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 ZFYVE26Q68DK2 2539 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 KALRNO60229 2985 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 TVP23AA6NH52 213 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 CASKO14936 926 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 FAM20BO75063 409 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 UBL3O95164 117 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 MRPL3P09001 348 aaKnown RBP7.44□□□□□ -1.22
TRIM48-201ENST00000417545 SPARCP09486 303 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 CLUP10909 449 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 PSMB1P20618 241 aaKnown RBP7.44□□□□□ -1.22
TRIM48-201ENST00000417545 UGT2B10P36537 528 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 SNRPGP62308 76 aaKnown RBP7.44□□□□□ -1.22
TRIM48-201ENST00000417545 ADARB1P78563 741 aaKnown RBP7.44□□□□□ -1.22
TRIM48-201ENST00000417545 MRPS34P82930 218 aaKnown RBP7.44□□□□□ -1.22
TRIM48-201ENST00000417545 TEKQ02763 1124 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 PLP2Q04941 152 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 PPA1Q15181 289 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 ETFDHQ16134 617 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 HIST3H3Q16695 136 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 TBRG1Q3YBR2 411 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 HIKESHIQ53FT3 197 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 LRFN4Q6PJG9 635 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 STAC2Q6ZMT1 411 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 MEPCEQ7L2J0 689 aaKnown RBP7.44□□□□□ -1.22
TRIM48-201ENST00000417545 LINGO2Q7L985 606 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 THAP5Q7Z6K1 395 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 DPPA2Q7Z7J5 298 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 ZBTB46Q86UZ6 589 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 WFDC8Q8IUA0 241 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 CCDC36Q8IYA8 594 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 ENTHD1Q8IYW4 607 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 OR6V1Q8N148 313 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 SLC22A24Q8N4F4 322 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 BBS1Q8NFJ9 593 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 OR6N2Q8NGY6 317 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 S100PBPQ96BU1 408 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 INTS14Q96SY0 518 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 SH3GL3Q99963 347 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 SIAEQ9HAT2 523 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms