RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 GZMMP51124 257 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 ZNF133P52736 654 aaPredicted RBP12.3□□□□□ -0.44
PAF1-202ENST00000416728 MRPS34P82930 218 aaKnown RBP12.3□□□□□ -0.44
PAF1-202ENST00000416728 GLO1Q04760 184 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 CYLC2Q14093 348 aaPredicted RBP12.3□□□□□ -0.44
PAF1-202ENST00000416728 PABPC1L2AQ5JQF8 200 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 C10orf128Q5T292 105 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 USP51Q70EK9 711 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 NKAIN4Q8IVV8 208 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 TMEM255BQ8WV15 326 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 TMEM239Q8WW34 195 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 MAGEB18Q96M61 343 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 SH3GL1Q99961 368 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 POLR2J2Q9GZM3 115 aaKnown RBP12.3□□□□□ -0.44
PAF1-202ENST00000416728 POLR2J3Q9H1A7 115 aaKnown RBP12.3□□□□□ -0.44
PAF1-202ENST00000416728 SAP30LQ9HAJ7 183 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 NPHS2Q9NP85 383 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 BAG5Q9UL15 447 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 A0A0G2JND7 137 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 RGS9O75916 674 aaPredicted RBP12.3□□□□□ -0.44
PAF1-202ENST00000416728 OR5F1O95221 314 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 MPZL1O95297 269 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 SLC2A10O95528 541 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 IGF2P01344 180 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 IGHV3-13P01766 116 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 NR2C1P13056 603 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 TNFRSF1BP20333 461 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 EPHA1P21709 976 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 STOMP27105 288 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 CDAP32320 146 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 ZNF81P51508 661 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 ACTG1P63261 375 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 TSTQ16762 297 aaKnown RBP12.3□□□□□ -0.44
PAF1-202ENST00000416728 HFEQ30201 348 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 RABL3Q5HYI8 236 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 ARMC4Q5T2S8 1044 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 NANOGP8Q6NSW7 305 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 UNQ6126/PRO20091Q6UXV3 157 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 CPEB3Q8NE35 698 aaKnown RBP12.3□□□□□ -0.44
PAF1-202ENST00000416728 GTF3AQ92664 365 aaKnown RBP12.3□□□□□ -0.44
PAF1-202ENST00000416728 TIMD4Q96H15 378 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 ECSITQ9BQ95 431 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 SIKE1Q9BRV8 207 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 SMURF2Q9HAU4 748 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 G6PC2Q9NQR9 355 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 C20orf141Q9NUB4 165 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 EIF3KQ9UBQ5 218 aaKnown RBP12.3□□□□□ -0.44
PAF1-202ENST00000416728 RIMS3Q9UJD0 308 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 A0A0G2JMP0 313 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 A0A0X1KG70 313 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 GMNCA6NCL1 334 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 NPIPB13A6NJU9 1138 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 HMGB1P1B2RPK0 211 aaPredicted RBP12.29□□□□□ -0.44
PAF1-202ENST00000416728 NPIPB4C9JG80 1138 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 FBP2O00757 339 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 SHOX2O60902 331 aaPredicted RBP12.29□□□□□ -0.44
PAF1-202ENST00000416728 IFNA14P01570 189 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 ZNF32P17041 273 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 CFPP27918 469 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 GCH1P30793 250 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 GDI2P50395 445 aaKnown RBP12.29□□□□□ -0.44
PAF1-202ENST00000416728 CD47Q08722 323 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 PIN1Q13526 163 aaPredicted RBP12.29□□□□□ -0.44
PAF1-202ENST00000416728 SGCAQ16586 387 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 ZNF718Q3SXZ3 478 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 FAM209AQ5JX71 171 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 METTL21CQ5VZV1 264 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 OR4M2Q8NGB6 313 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 MOSPD2Q8NHP6 518 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 LIPHQ8WWY8 451 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 NSMAFQ92636 917 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 HDAC2Q92769 488 aaKnown RBP12.29□□□□□ -0.44
PAF1-202ENST00000416728 RAB1CQ92928 201 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 NABP1Q96AH0 204 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 ELMOD3Q96FG2 381 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 PCDHB10Q9UN67 800 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 MED31Q9Y3C7 131 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 WIPI2Q9Y4P8 454 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 UGT2A1Q9Y4X1 527 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 CACNG2Q9Y698 323 aa12.29□□□□□ -0.44
PAF1-202ENST00000416728 LOC105371242A0A075B767 164 aa12.28□□□□□ -0.44
PAF1-202ENST00000416728 PLSCR5A0PG75 271 aa12.28□□□□□ -0.44
PAF1-202ENST00000416728 C5orf49A4QMS7 147 aa12.28□□□□□ -0.44
PAF1-202ENST00000416728 SPRY3O43610 288 aa12.28□□□□□ -0.44
PAF1-202ENST00000416728 PLPP2O43688 288 aa12.28□□□□□ -0.44
PAF1-202ENST00000416728 EDF1O60869 148 aaKnown RBP12.28□□□□□ -0.44
PAF1-202ENST00000416728 DEAF1O75398 565 aaPredicted RBP12.28□□□□□ -0.44
PAF1-202ENST00000416728 IGHV2-5P01817 119 aa12.28□□□□□ -0.44
PAF1-202ENST00000416728 THRBP10828 461 aa12.28□□□□□ -0.44
PAF1-202ENST00000416728 WNT5AP41221 380 aa12.28□□□□□ -0.44
PAF1-202ENST00000416728 OR1E2P47887 323 aa12.28□□□□□ -0.44
PAF1-202ENST00000416728 FMODQ06828 376 aa12.28□□□□□ -0.44
PAF1-202ENST00000416728 TOP3AQ13472 1001 aaPredicted RBP12.28□□□□□ -0.44
PAF1-202ENST00000416728 LAPTM4AQ15012 233 aa12.28□□□□□ -0.44
PAF1-202ENST00000416728 ALG10Q5BKT4 473 aa12.28□□□□□ -0.44
PAF1-202ENST00000416728 SPATA46Q5T0L3 261 aa12.28□□□□□ -0.44
PAF1-202ENST00000416728 ERICH5Q6P6B1 374 aa12.28□□□□□ -0.44
PAF1-202ENST00000416728 C1orf229Q6ZS94 237 aaPredicted RBP12.28□□□□□ -0.44
PAF1-202ENST00000416728 CALHM3Q86XJ0 350 aa12.28□□□□□ -0.44
PAF1-202ENST00000416728 ZNF101Q8IZC7 436 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms