RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 DHDDSQ86SQ9 333 aa16.43■□□□□ 0.22
UBXN4-202ENST00000415164 RETREG3Q86VR2 466 aa16.43■□□□□ 0.22
UBXN4-202ENST00000415164 PTOV1Q86YD1 416 aa16.43■□□□□ 0.22
UBXN4-202ENST00000415164 LRRC8CQ8TDW0 803 aa16.43■□□□□ 0.22
UBXN4-202ENST00000415164 NSMAFQ92636 917 aa16.43■□□□□ 0.22
UBXN4-202ENST00000415164 DDX28Q9NUL7 540 aaKnown RBP16.43■□□□□ 0.22
UBXN4-202ENST00000415164 EIF3KQ9UBQ5 218 aaKnown RBP16.43■□□□□ 0.22
UBXN4-202ENST00000415164 PCDHGB1Q9Y5G3 927 aa16.43■□□□□ 0.22
UBXN4-202ENST00000415164 C5orf49A4QMS7 147 aa16.42■□□□□ 0.22
UBXN4-202ENST00000415164 PRSS23O95084 383 aa16.42■□□□□ 0.22
UBXN4-202ENST00000415164 LYPD3O95274 346 aa16.42■□□□□ 0.22
UBXN4-202ENST00000415164 IGHV1-46P01743 117 aa16.42■□□□□ 0.22
UBXN4-202ENST00000415164 VIMP08670 466 aaKnown RBP16.42■□□□□ 0.22
UBXN4-202ENST00000415164 FPR2P25090 351 aa16.42■□□□□ 0.22
UBXN4-202ENST00000415164 STOMP27105 288 aa16.42■□□□□ 0.22
UBXN4-202ENST00000415164 MPV17P39210 176 aa16.42■□□□□ 0.22
UBXN4-202ENST00000415164 PCBP3P57721 371 aaKnown RBP16.42■□□□□ 0.22
UBXN4-202ENST00000415164 RPL18Q07020 188 aaKnown RBP16.42■□□□□ 0.22
UBXN4-202ENST00000415164 SGCAQ16586 387 aa16.42■□□□□ 0.22
UBXN4-202ENST00000415164 ZNF718Q3SXZ3 478 aa16.42■□□□□ 0.22
UBXN4-202ENST00000415164 RBMS3Q6XE24 437 aaKnown RBP16.42■□□□□ 0.22
UBXN4-202ENST00000415164 CPEB3Q8NE35 698 aaKnown RBP16.42■□□□□ 0.22
UBXN4-202ENST00000415164 AKR7LQ8NHP1 331 aa16.42■□□□□ 0.22
UBXN4-202ENST00000415164 ST7LQ8TDW4 575 aa16.42■□□□□ 0.22
UBXN4-202ENST00000415164 IPCEF1Q8WWN9 437 aaPredicted RBP16.42■□□□□ 0.22
UBXN4-202ENST00000415164 C7orf26Q96N11 449 aa16.42■□□□□ 0.22
UBXN4-202ENST00000415164 CCDC28BQ9BUN5 200 aa16.42■□□□□ 0.22
UBXN4-202ENST00000415164 ESM1Q9NQ30 184 aa16.42■□□□□ 0.22
UBXN4-202ENST00000415164 LEF1Q9UJU2 399 aaPredicted RBP16.42■□□□□ 0.22
UBXN4-202ENST00000415164 TRMUO75648 421 aaKnown RBP16.41■□□□□ 0.22
UBXN4-202ENST00000415164 TGDSO95455 350 aa16.41■□□□□ 0.22
UBXN4-202ENST00000415164 IGHV3-13P01766 116 aa16.41■□□□□ 0.22
UBXN4-202ENST00000415164 ASAH2BP0C7U1 165 aa16.41■□□□□ 0.22
UBXN4-202ENST00000415164 ZNF32P17041 273 aa16.41■□□□□ 0.22
UBXN4-202ENST00000415164 CD47Q08722 323 aa16.41■□□□□ 0.22
UBXN4-202ENST00000415164 HNRNPA0Q13151 305 aaKnown RBP16.41■□□□□ 0.22
UBXN4-202ENST00000415164 DLEU7Q6UYE1 221 aa16.41■□□□□ 0.22
UBXN4-202ENST00000415164 TSPYL5Q86VY4 417 aaPredicted RBP16.41■□□□□ 0.22
UBXN4-202ENST00000415164 ZDHHC22Q8N966 263 aa16.41■□□□□ 0.22
UBXN4-202ENST00000415164 PFN4Q8NHR9 129 aa16.41■□□□□ 0.22
UBXN4-202ENST00000415164 SLC25A40Q8TBP6 338 aa16.41■□□□□ 0.22
UBXN4-202ENST00000415164 TLCD1Q96CP7 247 aa16.41■□□□□ 0.22
UBXN4-202ENST00000415164 MPP4Q96JB8 637 aa16.41■□□□□ 0.22
UBXN4-202ENST00000415164 DUX5Q96PT3 197 aa16.41■□□□□ 0.22
UBXN4-202ENST00000415164 DCLRE1CQ96SD1 692 aaKnown RBP16.41■□□□□ 0.22
UBXN4-202ENST00000415164 EGLN1Q9GZT9 426 aa16.41■□□□□ 0.22
UBXN4-202ENST00000415164 TMBIM4Q9HC24 238 aa16.41■□□□□ 0.22
UBXN4-202ENST00000415164 ANGPT2O15123 496 aa16.4■□□□□ 0.22
UBXN4-202ENST00000415164 KCNAB3O43448 404 aa16.4■□□□□ 0.22
UBXN4-202ENST00000415164 ACADSP16219 412 aa16.4■□□□□ 0.22
UBXN4-202ENST00000415164 AQP2P41181 271 aa16.4■□□□□ 0.22
UBXN4-202ENST00000415164 GDI2P50395 445 aaKnown RBP16.4■□□□□ 0.22
UBXN4-202ENST00000415164 DAP3P51398 398 aaKnown RBP16.4■□□□□ 0.22
UBXN4-202ENST00000415164 UBA52P62987 128 aaKnown RBP16.4■□□□□ 0.22
UBXN4-202ENST00000415164 ERVK-25P63136 954 aa16.4■□□□□ 0.22
UBXN4-202ENST00000415164 FMODQ06828 376 aa16.4■□□□□ 0.22
UBXN4-202ENST00000415164 TOP3AQ13472 1001 aaPredicted RBP16.4■□□□□ 0.22
UBXN4-202ENST00000415164 FAM209AQ5JX71 171 aa16.4■□□□□ 0.22
UBXN4-202ENST00000415164 HDDC2Q7Z4H3 204 aa16.4■□□□□ 0.22
UBXN4-202ENST00000415164 PATL1Q86TB9 770 aaKnown RBP16.4■□□□□ 0.22
UBXN4-202ENST00000415164 ZNF101Q8IZC7 436 aa16.4■□□□□ 0.22
UBXN4-202ENST00000415164 ABHD4Q8TB40 342 aa16.4■□□□□ 0.22
UBXN4-202ENST00000415164 GEMIN6Q8WXD5 167 aaKnown RBP16.4■□□□□ 0.22
UBXN4-202ENST00000415164 ASB10Q8WXI3 467 aa16.4■□□□□ 0.22
UBXN4-202ENST00000415164 THOC1Q96FV9 657 aaKnown RBP16.4■□□□□ 0.22
UBXN4-202ENST00000415164 SLC19A3Q9BZV2 496 aa16.4■□□□□ 0.22
UBXN4-202ENST00000415164 OR2J1Q9GZK6 312 aa16.4■□□□□ 0.22
UBXN4-202ENST00000415164 INIPQ9NRY2 104 aa16.4■□□□□ 0.22
UBXN4-202ENST00000415164 NDUFAF1Q9Y375 327 aa16.4■□□□□ 0.22
UBXN4-202ENST00000415164 GMEB1Q9Y692 573 aa16.4■□□□□ 0.22
UBXN4-202ENST00000415164 MMP7P09237 267 aaPredicted RBP16.39■□□□□ 0.21
UBXN4-202ENST00000415164 FUT1P19526 365 aa16.39■□□□□ 0.21
UBXN4-202ENST00000415164 GATA3P23771 443 aa16.39■□□□□ 0.21
UBXN4-202ENST00000415164 WNT5AP41221 380 aa16.39■□□□□ 0.21
UBXN4-202ENST00000415164 UGT2B15P54855 530 aa16.39■□□□□ 0.21
UBXN4-202ENST00000415164 TAS2R41P59536 307 aa16.39■□□□□ 0.21
UBXN4-202ENST00000415164 SLC3A1Q07837 685 aa16.39■□□□□ 0.21
UBXN4-202ENST00000415164 NRN1LQ496H8 165 aa16.39■□□□□ 0.21
UBXN4-202ENST00000415164 ARMCX4Q5H9R4 360 aa16.39■□□□□ 0.21
UBXN4-202ENST00000415164 SIGLECL1Q8N7X8 197 aa16.39■□□□□ 0.21
UBXN4-202ENST00000415164 TAMM41Q96BW9 452 aa16.39■□□□□ 0.21
UBXN4-202ENST00000415164 SGTBQ96EQ0 304 aa16.39■□□□□ 0.21
UBXN4-202ENST00000415164 CGREF1Q99674 301 aa16.39■□□□□ 0.21
UBXN4-202ENST00000415164 C1QTNF5Q9BXJ0 243 aa16.39■□□□□ 0.21
UBXN4-202ENST00000415164 SIAEQ9HAT2 523 aa16.39■□□□□ 0.21
UBXN4-202ENST00000415164 MEPEQ9NQ76 525 aaPredicted RBP16.39■□□□□ 0.21
UBXN4-202ENST00000415164 ZSCAN5BA6NJL1 495 aa16.38■□□□□ 0.21
UBXN4-202ENST00000415164 SHOX2O60902 331 aaPredicted RBP16.38■□□□□ 0.21
UBXN4-202ENST00000415164 OR7A10O76100 309 aa16.38■□□□□ 0.21
UBXN4-202ENST00000415164 SBK2P0C263 348 aa16.38■□□□□ 0.21
UBXN4-202ENST00000415164 ATP4BP51164 291 aa16.38■□□□□ 0.21
UBXN4-202ENST00000415164 NFYCQ13952 458 aa16.38■□□□□ 0.21
UBXN4-202ENST00000415164 HIST3H3Q16695 136 aa16.38■□□□□ 0.21
UBXN4-202ENST00000415164 UNQ6126/PRO20091Q6UXV3 157 aa16.38■□□□□ 0.21
UBXN4-202ENST00000415164 NKAIN4Q8IVV8 208 aa16.38■□□□□ 0.21
UBXN4-202ENST00000415164 OR10A6Q8NH74 314 aa16.38■□□□□ 0.21
UBXN4-202ENST00000415164 MOSPD2Q8NHP6 518 aa16.38■□□□□ 0.21
UBXN4-202ENST00000415164 TMEM255BQ8WV15 326 aa16.38■□□□□ 0.21
UBXN4-202ENST00000415164 DYDC1Q8WWB3 177 aa16.38■□□□□ 0.21
UBXN4-202ENST00000415164 MRPL13Q9BYD1 178 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms