RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 WDR45Q9Y484 360 aa3.88□□□□□ -1.79
PTPRK-209ENST00000415046 DSCAMO60469 2012 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 RELNP78509 3460 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 A0A0G2JPF8 293 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 TEX13CA0A0J9YWL9 993 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 SERINC4A6NH21 518 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 DUXAA6NLW8 204 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 CLDN24A6NM45 220 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 HSPB2A8KAH6 182 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 HNRNPCL3B7ZW38 293 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 NPIPB9F8W1W9 429 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 H3BNH8 94 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 AIM2O14862 343 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 SEC14L5O43304 696 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 SNX3O60493 162 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 CCDC22O60826 627 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 ZG16O60844 167 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 STX11O75558 287 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 UGT2B17O75795 530 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 CBR3O75828 277 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 PGM3O95394 542 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 AK1P00568 194 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 IGHG3P01860 377 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 OPN1LWP04000 364 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 HPNP05981 417 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 UBTFL6P0CB48 400 aaPredicted RBP3.87□□□□□ -1.79
PTPRK-209ENST00000415046 ZCCHC18P0CG32 403 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 RNF224P0DH78 156 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 HNRNPCL4P0DMR1 293 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 IL11P20809 199 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 PPIBP23284 216 aaKnown RBP3.87□□□□□ -1.79
PTPRK-209ENST00000415046 ELAVL4P26378 380 aaKnown RBP3.87□□□□□ -1.79
PTPRK-209ENST00000415046 CHATP28329 748 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 AQP1P29972 269 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 GCH1P30793 250 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 SRD5A2P31213 254 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 GCKP35557 465 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 STARP49675 285 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 VEGFCP49767 419 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 CRISP3P54108 245 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 ATP12AP54707 1039 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 IRX1P78414 480 aaPredicted RBP3.87□□□□□ -1.79
PTPRK-209ENST00000415046 C17orf67Q0P5P2 114 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 CYLC2Q14093 348 aaPredicted RBP3.87□□□□□ -1.79
PTPRK-209ENST00000415046 RGNQ15493 299 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 HSPB2Q16082 182 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 MAPK14Q16539 360 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 ZNF630Q2M218 657 aaPredicted RBP3.87□□□□□ -1.79
PTPRK-209ENST00000415046 HYAL4Q2M3T9 481 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 TRMT5Q32P41 509 aaKnown RBP3.87□□□□□ -1.79
PTPRK-209ENST00000415046 LRIF1Q5T3J3 769 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 WLSQ5T9L3 541 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 ARHGAP11AQ6P4F7 1023 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 TMEM81Q6P7N7 255 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 CBLN3Q6UW01 205 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 ARSKQ6UWY0 536 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 PLXDC2Q6UX71 529 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 DLEU7Q6UYE1 221 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 ZNF836Q6ZNA1 936 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 LRRC74BQ6ZQY2 392 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 IFNEQ86WN2 208 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 VRK2Q86Y07 508 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 CHERPQ8IWX8 916 aaKnown RBP3.87□□□□□ -1.79
PTPRK-209ENST00000415046 ZNF619Q8N2I2 560 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 C10orf111Q8N326 155 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 CIARTQ8N365 385 aaPredicted RBP3.87□□□□□ -1.79
PTPRK-209ENST00000415046 RPRMLQ8N4K4 120 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 PARP16Q8N5Y8 322 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 CHDHQ8NE62 594 aaPredicted RBP3.87□□□□□ -1.79
PTPRK-209ENST00000415046 ATP6V1C2Q8NEY4 427 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 NEIL3Q8TAT5 605 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 FAM57AQ8TBR7 257 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 MIPOL1Q8TD10 442 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 RNF138Q8WVD3 245 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 CNOT9Q92600 299 aaKnown RBP3.87□□□□□ -1.79
PTPRK-209ENST00000415046 MAL2Q969L2 176 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 DNAJA3Q96EY1 480 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 KLHL15Q96M94 604 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 DUX3Q96PT4 197 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 CCT8L2Q96SF2 557 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 CGREF1Q99674 301 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 THUMPD3Q9BV44 507 aaKnown RBP3.87□□□□□ -1.79
PTPRK-209ENST00000415046 UGT2B28Q9BY64 529 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 KRTAP4-4Q9BYR3 166 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 OR2B2Q9GZK3 357 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 ZNF350Q9GZX5 532 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 HOXD1Q9GZZ0 328 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 SLC38A1Q9H2H9 487 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 UBQLN3Q9H347 655 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 TMEM185BQ9H7F4 350 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 PTGES2Q9H7Z7 377 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 CACYBPQ9HB71 228 aaKnown RBP3.87□□□□□ -1.79
PTPRK-209ENST00000415046 QPCTLQ9NXS2 382 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 C1RLQ9NZP8 487 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 TCF19Q9Y242 345 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 ARL2BPQ9Y2Y0 163 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 L3MBTL1Q9Y468 752 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 CREBBPQ92793 2442 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 ARID1AO14497 2285 aa3.87□□□□□ -1.79
PTPRK-209ENST00000415046 CHD3Q12873 2000 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms