RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 FAM122BQ7Z309 247 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 ATCAYQ86WG3 371 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 WDFY1Q8IWB7 410 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 EXD3Q8N9H8 876 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 RASD2Q96D21 266 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 Q96M85 177 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 GPX7Q96SL4 187 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-202ENST00000414700 B3GAT1Q9P2W7 334 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 NPIPA1Q9UND3 350 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 RELNP78509 3460 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 LINC00854A0A1B0GVQ3 168 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 FAM183AA6NL82 134 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 TLX2O43763 284 aaPredicted RBP13.85□□□□□ -0.19
SHMT2-202ENST00000414700 CXCL13O43927 109 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 IGHG3P01860 377 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 HIST1H1CP16403 213 aaKnown RBP13.85□□□□□ -0.19
SHMT2-202ENST00000414700 NOS3P29474 1203 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 MFSD13AQ14CX5 517 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 DPY19L2P2Q6ZN68 376 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 GHDCQ8N2G8 530 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 LRRC20Q8TCA0 184 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 TSPAN32Q96QS1 320 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 TIMP4Q99727 224 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 AIFM2Q9BRQ8 373 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 PRRG3Q9BZD7 231 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 AMBNQ9NP70 447 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 KLHL13Q9P2N7 655 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 EIF3KQ9UBQ5 218 aaKnown RBP13.85□□□□□ -0.19
SHMT2-202ENST00000414700 RABL2BQ9UNT1 228 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 B3GALT5Q9Y2C3 310 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 EPG5Q9HCE0 2579 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 GJE1A6NN92 205 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 LINC01387J3KSC0 135 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 CD14P08571 375 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 PSKH1P11801 424 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 NUDT6P53370 316 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 CARD18P57730 90 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 SLC35A1P78382 337 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 ST3GAL4Q11206 333 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 RPUSD3Q6P087 351 aaKnown RBP13.85□□□□□ -0.19
SHMT2-202ENST00000414700 PAQR6Q6TCH4 344 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 GPAT4Q86UL3 456 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 ZGRF1Q86YA3 2104 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 LAX1Q8IWV1 398 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 CYB561A3Q8NBI2 242 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 OR4K13Q8NH42 304 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 OR2V1Q8NHB1 315 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 HCAR1Q9BXC0 346 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 POLDIP3Q9BY77 421 aaKnown RBP13.85□□□□□ -0.19
SHMT2-202ENST00000414700 C11orf54Q9H0W9 315 aaPredicted RBP13.85□□□□□ -0.19
SHMT2-202ENST00000414700 CMAHPQ9Y471 501 aa13.85□□□□□ -0.19
SHMT2-202ENST00000414700 TEX13CA0A0J9YWL9 993 aa13.84□□□□□ -0.19
SHMT2-202ENST00000414700 AQP7P3A6NL99 342 aa13.84□□□□□ -0.19
SHMT2-202ENST00000414700 SMAD9O15198 467 aaKnown RBP13.84□□□□□ -0.19
SHMT2-202ENST00000414700 GPX5O75715 221 aa13.84□□□□□ -0.19
SHMT2-202ENST00000414700 OR6A2O95222 327 aa13.84□□□□□ -0.19
SHMT2-202ENST00000414700 RAC3P60763 192 aa13.84□□□□□ -0.19
SHMT2-202ENST00000414700 POU3F1Q03052 451 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-202ENST00000414700 MELKQ14680 651 aa13.84□□□□□ -0.19
SHMT2-202ENST00000414700 ACKR1Q16570 336 aa13.84□□□□□ -0.19
SHMT2-202ENST00000414700 SDR9C7Q8NEX9 313 aa13.84□□□□□ -0.19
SHMT2-202ENST00000414700 OR8J1Q8NGP2 316 aa13.84□□□□□ -0.19
SHMT2-202ENST00000414700 ZPLD1Q8TCW7 415 aa13.84□□□□□ -0.19
SHMT2-202ENST00000414700 PNPLA2Q96AD5 504 aa13.84□□□□□ -0.19
SHMT2-202ENST00000414700 MGLLQ99685 303 aa13.84□□□□□ -0.19
SHMT2-202ENST00000414700 CDCA4Q9BXL8 241 aa13.84□□□□□ -0.19
SHMT2-202ENST00000414700 MED20Q9H944 212 aa13.84□□□□□ -0.19
SHMT2-202ENST00000414700 TIGARQ9NQ88 270 aa13.84□□□□□ -0.19
SHMT2-202ENST00000414700 C12orf4Q9NQ89 552 aa13.84□□□□□ -0.19
SHMT2-202ENST00000414700 MED29Q9NX70 200 aa13.84□□□□□ -0.19
SHMT2-202ENST00000414700 DNAJC27Q9NZQ0 273 aa13.84□□□□□ -0.19
SHMT2-202ENST00000414700 TSPAN9O75954 239 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 ACTL6AO96019 429 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 RORCP51449 518 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 CSNK2A1P68400 391 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-202ENST00000414700 TMEM225Q6GV28 225 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 OR52E2Q8NGJ4 325 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 ROBO4Q8WZ75 1007 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 LRR1Q96L50 414 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 SLC38A2Q96QD8 506 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 BARHL1Q9BZE3 327 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 HINT3Q9NQE9 182 aaKnown RBP13.83□□□□□ -0.2
SHMT2-202ENST00000414700 CMC2Q9NRP2 79 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 GLTPQ9NZD2 209 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 TUBD1Q9UJT1 453 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 ZNF346Q9UL40 294 aaKnown RBP13.83□□□□□ -0.2
SHMT2-202ENST00000414700 CACNA1BQ00975 2339 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 IQCMA0A1B0GVH7 501 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 H7C1C5 153 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 ARPC3O15145 178 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 AKR7A2O43488 359 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 CLUP10909 449 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 LCN6P62502 163 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 RUNX1T1Q06455 604 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 ZP4Q12836 540 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 CRMP1Q14194 572 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 MESTQ5EB52 335 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 NHLRC1Q6VVB1 395 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 GDPD1Q8N9F7 314 aa13.83□□□□□ -0.2
SHMT2-202ENST00000414700 BBS1Q8NFJ9 593 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms