RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 TBC1D28Q2M2D7 210 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 TSEN54Q7Z6J9 526 aaKnown RBP9.69□□□□□ -0.86
RFFL-204ENST00000414419 ARHGAP24Q8N264 748 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 SVOPLQ8N434 492 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 ARIH2OSQ8N7S6 290 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 MAPK1IP1LQ8NDC0 245 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 SLC30A7Q8NEW0 376 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 OR1J2Q8NGS2 313 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 FGFBP3Q8TAT2 258 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 ZNF75AQ96N20 296 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 TSPAN32Q96QS1 320 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 CDH20Q9HBT6 801 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 SLC7A8Q9UHI5 535 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 TMCC3Q9ULS5 477 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 YLPM1P49750 1951 aaKnown RBP9.68□□□□□ -0.86
RFFL-204ENST00000414419 A0A1W2PPL8 197 aa9.68□□□□□ -0.86
RFFL-204ENST00000414419 NDUFB2O95178 105 aa9.68□□□□□ -0.86
RFFL-204ENST00000414419 STAMBPO95630 424 aa9.68□□□□□ -0.86
RFFL-204ENST00000414419 CD14P08571 375 aa9.68□□□□□ -0.86
RFFL-204ENST00000414419 SLC25A16P16260 332 aa9.68□□□□□ -0.86
RFFL-204ENST00000414419 CALB2P22676 271 aa9.68□□□□□ -0.86
RFFL-204ENST00000414419 CDAP32320 146 aa9.68□□□□□ -0.86
RFFL-204ENST00000414419 APLNRP35414 380 aa9.68□□□□□ -0.86
RFFL-204ENST00000414419 GLRXP35754 106 aa9.68□□□□□ -0.86
RFFL-204ENST00000414419 IFNGR2P38484 337 aa9.68□□□□□ -0.86
RFFL-204ENST00000414419 PPOXP50336 477 aa9.68□□□□□ -0.86
RFFL-204ENST00000414419 PDLIM4P50479 330 aa9.68□□□□□ -0.86
RFFL-204ENST00000414419 SELENOVP59797 346 aa9.68□□□□□ -0.86
RFFL-204ENST00000414419 CARTPTQ16568 116 aa9.68□□□□□ -0.86
RFFL-204ENST00000414419 SLC25A47Q6Q0C1 308 aa9.68□□□□□ -0.86
RFFL-204ENST00000414419 DNM1P46Q6ZS02 220 aa9.68□□□□□ -0.86
RFFL-204ENST00000414419 ZNF525Q8N782 197 aa9.68□□□□□ -0.86
RFFL-204ENST00000414419 LRRC75AQ8NAA5 344 aa9.68□□□□□ -0.86
RFFL-204ENST00000414419 RSRC1Q96IZ7 334 aaKnown RBP9.68□□□□□ -0.86
RFFL-204ENST00000414419 ZNF570Q96NI8 536 aa9.68□□□□□ -0.86
RFFL-204ENST00000414419 SORCS2Q96PQ0 1159 aa9.68□□□□□ -0.86
RFFL-204ENST00000414419 MYOZ1Q9NP98 299 aaPredicted RBP9.68□□□□□ -0.86
RFFL-204ENST00000414419 ZANQ9Y493 2812 aa9.68□□□□□ -0.86
RFFL-204ENST00000414419 IGHV4-30-2A0A087WSY4 118 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 TRBV4-1A0A0J9YWV2 114 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 UNC119BA6NIH7 251 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 AHCYL1O43865 530 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 OR10H3O60404 316 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 CCNOP22674 350 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 RRM2P31350 389 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 RAD52P43351 418 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 OMPP47874 163 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 RPS6KA3P51812 740 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 PCBD1P61457 104 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 FHL1Q13642 323 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 SEC23BQ15437 767 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 MTX3Q5HYI7 312 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 FAM27BQ5VT28 67 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 RGS7BPQ6MZT1 257 aaPredicted RBP9.67□□□□□ -0.86
RFFL-204ENST00000414419 CYP2R1Q6VVX0 501 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 DHFR2Q86XF0 187 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 ZNF584Q8IVC4 421 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 ZDHHC21Q8IVQ6 265 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 ALDH16A1Q8IZ83 802 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 CLDN22Q8N7P3 220 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 OR10H5Q8NGA6 315 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 ZNF519Q8TB69 540 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 NEU4Q8WWR8 484 aaPredicted RBP9.67□□□□□ -0.86
RFFL-204ENST00000414419 MRPL24Q96A35 216 aaKnown RBP9.67□□□□□ -0.86
RFFL-204ENST00000414419 NMD3Q96D46 503 aaKnown RBP9.67□□□□□ -0.86
RFFL-204ENST00000414419 DHRS1Q96LJ7 313 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 Q96M85 177 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 DOK1Q99704 481 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 MUC13Q9H3R2 512 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 MS4A5Q9H3V2 200 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 IL1RAPQ9NPH3 570 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 ACTR3BQ9P1U1 418 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 DUSP13Q9UII6 198 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 ADAM21Q9UKJ8 722 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 SIGLEC7Q9Y286 467 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 ADAM18Q9Y3Q7 739 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 UGT2A1Q9Y4X1 527 aa9.67□□□□□ -0.86
RFFL-204ENST00000414419 ZFHX3Q15911 3703 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 IGKV1D-43A0A0B4J1Z2 117 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 TEX13CA0A0J9YWL9 993 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 A0A1W2PPW3 197 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 PRSS37A4D1T9 235 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 H7C1C5 153 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 M0R233 179 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 NDUFS8O00217 210 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 SYNGR3O43761 229 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 GPRIN2O60269 458 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 PTP4A3O75365 173 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 KRT36O76013 467 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 LY6HO94772 140 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 SEMG1P04279 462 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 LCKP06239 509 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 ADRA2AP08913 450 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 CST2P09228 141 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 MMP7P09237 267 aaPredicted RBP9.66□□□□□ -0.86
RFFL-204ENST00000414419 FAM157BP0CG42 384 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 CCL2P13500 99 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 ZNF32P17041 273 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 MSR1P21757 451 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 STOMP27105 288 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms