RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 GOLGA8IPA6NC78 632 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 GOLGA8JA6NMD2 632 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 FAM166BA8MTA8 275 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 H3BQF6 201 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 K7EQM0 130 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 PRRG1O14668 218 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 ARPC3O15145 178 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 CETN3O15182 167 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 CALUO43852 315 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 KLF8O95600 359 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 AP2A1O95782 977 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 UGT2B4P06133 528 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 ICAM2P13598 275 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 ZNF32P17041 273 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 ATP6V1B2P21281 511 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 CXCR2P25025 360 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 GCAP28676 217 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 CASQ1P31415 396 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 ARL2P36404 184 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 DDOSTP39656 456 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 GLP1RP43220 463 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 RPS10P46783 165 aaKnown RBP2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 MARCKSL1P49006 195 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 EFNB2P52799 333 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 HADHBP55084 474 aaKnown RBP2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 SH3BGRP55822 239 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 MAP2K1Q02750 393 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 ENPEPQ07075 957 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 CYP24A1Q07973 514 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 DPYSL2Q16555 572 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 EXOC3L4Q17RC7 722 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 KCTD19Q17RG1 926 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 WHAMMP3Q1A5X7 153 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 CCDC122Q5T0U0 273 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 LCE3AQ5TA76 89 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 TIGD3Q6B0B8 471 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 USP50Q70EL3 339 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 NLRP9Q7RTR0 991 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 ZNF429Q86V71 674 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 ERO1BQ86YB8 467 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 FAM71AQ8IYT1 594 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 ARIH2OSQ8N7S6 290 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 MDS2Q8NDY4 140 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 OR4K14Q8NGD5 310 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 OPTNQ96CV9 577 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 TM4SF19Q96DZ7 209 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 ZNF607Q96SK3 696 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 TIPINQ9BVW5 301 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 CCDC94Q9BW85 323 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 RAB18Q9NP72 206 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 SMOXQ9NWM0 555 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 DNAJC12Q9UKB3 198 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 KLK12Q9UKR0 248 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 KIF26AQ9ULI4 1882 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 STAP1Q9ULZ2 295 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 GUCA1BQ9UMX6 200 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 PACSIN2Q9UNF0 486 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 TIMM10BQ9Y5J6 103 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 WSB1Q9Y6I7 421 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 ANKRD36A6QL64 1941 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 ANAPC1Q9H1A4 1944 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 TDRD6O60522 2096 aaKnown RBP2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 LOC110117498-PIK3R3F6TDL0 507 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 CXCL11O14625 94 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 AGPAT2O15120 278 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 B4GALT5O43286 388 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 UGT1A9O60656 530 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 PALMO75781 387 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 FGFR1OPO95684 399 aaKnown RBP2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 SNAI1O95863 264 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 P04436 131 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 TNFSF9P41273 254 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 NAMPTP43490 491 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 GCLMP48507 274 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 ARRB1P49407 418 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 LHX2P50458 406 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 CRYBB1P53674 252 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 PKNOX1P55347 436 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 SP4Q02446 784 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 KLRB1Q12918 225 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 SNRNP35Q16560 246 aaKnown RBP2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 MICBQ29980 383 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 HSDL1Q3SXM5 330 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 BCL7AQ4VC05 210 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 CARD16Q5EG05 197 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 SAMD4BQ5PRF9 694 aaKnown RBP2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 KHDRBS2Q5VWX1 349 aaKnown RBP2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 CTRB2Q6GPI1 263 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 SPOPLQ6IQ16 392 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 C6orf89Q6UWU4 347 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 TIFABQ6ZNK6 161 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 NT5DC3Q86UY8 548 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 RALGPS2Q86X27 583 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 TMEM123Q8N131 208 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 PDCL2Q8N4E4 241 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 MMGT1Q8N4V1 131 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 METTL13Q8N6R0 699 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 NPBQ8NG41 125 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 OR5B17Q8NGF7 314 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 OR6X1Q8NH79 312 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms