RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 HINT3Q9NQE9 182 aaKnown RBP8.13□□□□□ -1.11
RFFL-203ENST00000413582 MED29Q9NX70 200 aa8.13□□□□□ -1.11
RFFL-203ENST00000413582 P2RX2Q9UBL9 471 aa8.13□□□□□ -1.11
RFFL-203ENST00000413582 PRDM4Q9UKN5 801 aa8.13□□□□□ -1.11
RFFL-203ENST00000413582 CACNG2Q9Y698 323 aa8.13□□□□□ -1.11
RFFL-203ENST00000413582 IGLV3-9A0A075B6K5 115 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 IGHV1-69-2A0A0G2JMI3 117 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 CLDN25C9JDP6 229 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 M0R082 166 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 CXCR6O00574 342 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 ARPC2O15144 300 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 MGRN1O60291 552 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 RAB36O95755 333 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 CLPTM1O96005 669 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 IFNA14P01570 189 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 BCHEP06276 602 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 RNASE1P07998 156 aaKnown RBP8.12□□□□□ -1.11
RFFL-203ENST00000413582 NR2F1P10589 423 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 KDELR2P33947 212 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 CRYBB2P43320 205 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 LCN2P80188 198 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 CDK6Q00534 326 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 C1DQ13901 141 aaKnown RBP8.12□□□□□ -1.11
RFFL-203ENST00000413582 KPNB1Q14974 876 aaKnown RBP8.12□□□□□ -1.11
RFFL-203ENST00000413582 MFSD13AQ14CX5 517 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 PCGF3Q3KNV8 242 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 CARD17Q5XLA6 110 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 REEP3Q6NUK4 255 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 PATL1Q86TB9 770 aaKnown RBP8.12□□□□□ -1.11
RFFL-203ENST00000413582 ZNF584Q8IVC4 421 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 WDFY1Q8IWB7 410 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 SYT14Q8NB59 555 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 HIPK4Q8NE63 616 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 DEFB108BQ8NET1 73 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 OR52P1PQ8NH57 321 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 ZNF417Q8TAU3 575 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 SLC38A5Q8WUX1 472 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 RASSF5Q8WWW0 418 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 TAF15Q92804 592 aaKnown RBP eCLIP8.12□□□□□ -1.11
RFFL-203ENST00000413582 MAL2Q969L2 176 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 CCDC124Q96CT7 223 aaKnown RBP8.12□□□□□ -1.11
RFFL-203ENST00000413582 TMEM19Q96HH6 336 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 NSMCE2Q96MF7 247 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 ZNF48Q96MX3 618 aaPredicted RBP8.12□□□□□ -1.11
RFFL-203ENST00000413582 ZNF587Q96SQ5 575 aaPredicted RBP8.12□□□□□ -1.11
RFFL-203ENST00000413582 SPATA5L1Q9BVQ7 753 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 PCDHAC1Q9H158 963 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 BCL2L10Q9HD36 194 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 NKIRAS2Q9NYR9 191 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 TAAR3PQ9P1P4 343 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 ZNF69Q9UC07 566 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 ANGPT4Q9Y264 503 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 ZNF443Q9Y2A4 671 aaPredicted RBP8.12□□□□□ -1.11
RFFL-203ENST00000413582 CHST2Q9Y4C5 530 aa8.12□□□□□ -1.11
RFFL-203ENST00000413582 PPIAL4EA0A075B759 164 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 PPIAL4CA0A0B4J2A2 164 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 A0A0G2JPF8 293 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 LOC102725191A0A1B0GVB3 256 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 TCRBV3S1A0A5B6 114 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 HNRNPCL2B2RXH8 293 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 HNRNPCL3B7ZW38 293 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 PPIAL4DF5H284 164 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 CLDN34H7C241 214 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 UBL3O95164 117 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 HPRP00739 348 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 HNRNPCL4P0DMR1 293 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 PPIAL4FP0DN26 164 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 ETS2P15036 469 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 ZNF250P15622 560 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 MDKP21741 143 aaPredicted RBP8.11□□□□□ -1.11
RFFL-203ENST00000413582 GCH1P30793 250 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 RAD52P43351 418 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 CRISP3P54108 245 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 KLF3P57682 345 aaPredicted RBP8.11□□□□□ -1.11
RFFL-203ENST00000413582 PCBP3P57721 371 aaKnown RBP8.11□□□□□ -1.11
RFFL-203ENST00000413582 ERVS71-1P61550 626 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 RAB1AP62820 205 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 TEKQ02763 1124 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 SCARB2Q14108 478 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 RAB39AQ14964 217 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 ARMCX4Q5H9R4 360 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 RPS26P11Q5JNZ5 115 aaPredicted RBP8.11□□□□□ -1.11
RFFL-203ENST00000413582 KLF17Q5JT82 389 aaPredicted RBP8.11□□□□□ -1.11
RFFL-203ENST00000413582 FAM69AQ5T7M9 428 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 RGS7BPQ6MZT1 257 aaPredicted RBP8.11□□□□□ -1.11
RFFL-203ENST00000413582 TMEM154Q6P9G4 183 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 USP51Q70EK9 711 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 CLIP4Q8N3C7 705 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 PAQR4Q8N4S7 273 aaPredicted RBP8.11□□□□□ -1.11
RFFL-203ENST00000413582 FAM156AQ8NDB6 213 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 ADPRHL1Q8NDY3 354 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 BBS10Q8TAM1 723 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 SNX33Q8WV41 574 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 GTF3AQ92664 365 aaKnown RBP8.11□□□□□ -1.11
RFFL-203ENST00000413582 LRR1Q96L50 414 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 ZNF607Q96SK3 696 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 FOXB1Q99853 325 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 GAL3ST1Q99999 423 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 EMC6Q9BV81 110 aa8.11□□□□□ -1.11
RFFL-203ENST00000413582 DCLRE1BQ9H816 532 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms