RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 POMZP3Q6PJE2 187 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 PXKQ7Z7A4 578 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 LAX1Q8IWV1 398 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 DND1Q8IYX4 353 aaKnown RBP15.29■□□□□ 0.04
PTPRC-206ENST00000413409 RFLNBQ8N5W9 214 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 OR51L1Q8NGJ5 315 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 MFSD8Q8NHS3 518 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 ZNRF4Q8WWF5 429 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 PELI1Q96FA3 418 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 MRGPRX4Q96LA9 322 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 IMMP1LQ96LU5 166 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 RASL10BQ96S79 203 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 RERGLQ9H628 205 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 SP140LQ9H930 580 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 MARCH7Q9H992 704 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 COPS3Q9UNS2 423 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 V9GYH0 126 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 HSPB2A8KAH6 182 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 PLPP3O14495 311 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 XKRYO14609 159 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 MAGEB3O15480 346 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 RGS5O15539 181 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 TBX1O43435 398 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 GPRIN2O60269 458 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 SERPINI2O75830 405 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 OR2J2O76002 312 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 CLDN14O95500 239 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 PTTG1O95997 202 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 KLK2P20151 261 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 AGAP20933 346 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 MYL9P24844 172 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 PYCR1P32322 319 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 BLVRAP53004 296 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 ZP4Q12836 540 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 FOXF1Q12946 379 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 SNTA1Q13424 505 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 HSPB2Q16082 182 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 BTBD16Q32M84 506 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 TP53I3Q53FA7 332 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 ZNF684Q5T5D7 378 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 TRILQ7L0X0 811 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 TPRA1Q86W33 373 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 TIGD4Q8IY51 512 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 SNX33Q8WV41 574 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 ACOT12Q8WYK0 555 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 POTEKPQ9BYX7 375 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 MIXL1Q9H2W2 232 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 TXNIPQ9H3M7 391 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 TPK1Q9H3S4 243 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 METTL7AQ9H8H3 244 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 GALNT9Q9HCQ5 603 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 ABCB10Q9NRK6 738 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 VSX1Q9NZR4 365 aaPredicted RBP15.28■□□□□ 0.04
PTPRC-206ENST00000413409 ZNF346Q9UL40 294 aaKnown RBP15.28■□□□□ 0.04
PTPRC-206ENST00000413409 HS3ST3B1Q9Y662 390 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 FKBP7Q9Y680 259 aa15.28■□□□□ 0.04
PTPRC-206ENST00000413409 B4DXG7 233 aa15.27■□□□□ 0.04
PTPRC-206ENST00000413409 TP53I11O14683 189 aa15.27■□□□□ 0.04
PTPRC-206ENST00000413409 PHYHO14832 338 aa15.27■□□□□ 0.04
PTPRC-206ENST00000413409 OR6A2O95222 327 aa15.27■□□□□ 0.04
PTPRC-206ENST00000413409 ZNF41P51814 821 aaPredicted RBP15.27■□□□□ 0.04
PTPRC-206ENST00000413409 SIRPAP78324 504 aa15.27■□□□□ 0.04
PTPRC-206ENST00000413409 SLC3A1Q07837 685 aa15.27■□□□□ 0.04
PTPRC-206ENST00000413409 DBPQ10586 325 aaPredicted RBP15.27■□□□□ 0.04
PTPRC-206ENST00000413409 PLPPR5Q32ZL2 321 aa15.27■□□□□ 0.04
PTPRC-206ENST00000413409 FAM205BPQ63HN1 556 aa15.27■□□□□ 0.04
PTPRC-206ENST00000413409 STEAP3Q658P3 488 aa15.27■□□□□ 0.04
PTPRC-206ENST00000413409 MZT2AQ6P582 158 aa15.27■□□□□ 0.04
PTPRC-206ENST00000413409 LINC00696Q6ZRV3 163 aa15.27■□□□□ 0.04
PTPRC-206ENST00000413409 KCTD20Q7Z5Y7 419 aa15.27■□□□□ 0.04
PTPRC-206ENST00000413409 CDC20BQ86Y33 519 aa15.27■□□□□ 0.04
PTPRC-206ENST00000413409 SNX29P2Q8IUI4 249 aa15.27■□□□□ 0.04
PTPRC-206ENST00000413409 OR10G3Q8NGC4 313 aa15.27■□□□□ 0.04
PTPRC-206ENST00000413409 ZNF417Q8TAU3 575 aa15.27■□□□□ 0.04
PTPRC-206ENST00000413409 PHYHIPQ92561 330 aa15.27■□□□□ 0.04
PTPRC-206ENST00000413409 NRGNQ92686 78 aa15.27■□□□□ 0.04
PTPRC-206ENST00000413409 ABTB1Q969K4 478 aaPredicted RBP15.27■□□□□ 0.04
PTPRC-206ENST00000413409 KCTD12Q96CX2 325 aaKnown RBP15.27■□□□□ 0.04
PTPRC-206ENST00000413409 DDIT4LQ96D03 193 aa15.27■□□□□ 0.04
PTPRC-206ENST00000413409 ZNF587Q96SQ5 575 aaPredicted RBP15.27■□□□□ 0.04
PTPRC-206ENST00000413409 RNF32Q9H0A6 362 aa15.27■□□□□ 0.04
PTPRC-206ENST00000413409 ABCB9Q9NP78 766 aa15.27■□□□□ 0.04
PTPRC-206ENST00000413409 ADAM30Q9UKF2 790 aa15.27■□□□□ 0.04
PTPRC-206ENST00000413409 COL6A5A8TX70 2615 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 SHISA3A0PJX4 238 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 PRSS37A4D1T9 235 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 A6NIZ1 184 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 FAM47E-STBD1D6RA91 191 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 GATBO75879 557 aaKnown RBP15.26■□□□□ 0.03
PTPRC-206ENST00000413409 PTBP1P26599 531 aaKnown RBP eCLIP15.26■□□□□ 0.031e-6■■■■□ 21.2
PTPRC-206ENST00000413409 GDI2P50395 445 aaKnown RBP15.26■□□□□ 0.03
PTPRC-206ENST00000413409 DEFA1P59665 94 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 DEFA3P59666 94 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 RAP1BP61224 184 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 RAP1AP62834 184 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 ACKR1Q16570 336 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 C3AR1Q16581 482 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 OPN5Q6U736 354 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 ARMC10Q8N2F6 343 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 GHDCQ8N2G8 530 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms