RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 VDAC3Q9Y277 283 aa12.48□□□□□ -0.41
NUB1-201ENST00000413040 COA3Q9Y2R0 106 aaPredicted RBP12.48□□□□□ -0.41
NUB1-201ENST00000413040 TMED7Q9Y3B3 224 aa12.48□□□□□ -0.41
NUB1-201ENST00000413040 LOC100509620A0A075B734 347 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 IGHV1OR15-9A0A0B4J2B8 117 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 FRG2CA6NGY1 282 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 AHSA1O95433 338 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 DDAH2O95865 285 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 TGM6O95932 706 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 FBLP22087 321 aaKnown RBP12.47□□□□□ -0.41
NUB1-201ENST00000413040 SPOCK1Q08629 439 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 RASGEF1BQ0VAM2 473 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 SLC18B1Q6NT16 456 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 SMRP1Q8NCR6 262 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 ZNF721Q8TF20 911 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 DAZLQ92904 295 aaKnown RBP12.47□□□□□ -0.41
NUB1-201ENST00000413040 FAM3DQ96BQ1 224 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 CMTM3Q96MX0 182 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 SFXN2Q96NB2 322 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 EXO5Q9H790 373 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 ZNF304Q9HCX3 659 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 SLC2A4RGQ9NR83 387 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 RDH8Q9NYR8 311 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 PTTG3PQ9NZH4 202 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 TRBV5-5A0A0J9YX44 114 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 WNT11O96014 354 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 GUSBP08236 651 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 HLA-DOBP13765 273 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 IFNGR1P15260 489 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 NME1P15531 152 aaKnown RBP12.47□□□□□ -0.41
NUB1-201ENST00000413040 ABCD3P28288 659 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 PRSS3P35030 304 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 SLC6A8P48029 635 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 SLC17A1Q14916 467 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 RAB11BQ15907 218 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 CLPPQ16740 277 aaPredicted RBP12.47□□□□□ -0.41
NUB1-201ENST00000413040 IQCF2Q8IXL9 164 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 ZNF248Q8NDW4 579 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 ADIPOR1Q96A54 375 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 OR8B4Q96RC9 309 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 PLEKHA1Q9HB21 404 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 ETV7Q9Y603 341 aa12.47□□□□□ -0.41
NUB1-201ENST00000413040 PRSS37A4D1T9 235 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 GGT3PA6NGU5 568 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 ZNF254O75437 659 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 PDGFAP04085 211 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 CD3DP04234 171 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 CD2P06729 351 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 IL11P20809 199 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 RIDAP52758 137 aaKnown RBP12.46□□□□□ -0.41
NUB1-201ENST00000413040 EFNA3P52797 238 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 RPL27P61353 136 aaKnown RBP12.46□□□□□ -0.41
NUB1-201ENST00000413040 MRPS10P82664 201 aaKnown RBP12.46□□□□□ -0.41
NUB1-201ENST00000413040 ELAVL1Q15717 326 aaKnown RBP12.46□□□□□ -0.41
NUB1-201ENST00000413040 GLYATL3Q5SZD4 288 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 CORO6Q6QEF8 472 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 OR1L3Q8NH93 324 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 SLC25A44Q96H78 314 aaPredicted RBP12.46□□□□□ -0.41
NUB1-201ENST00000413040 RBP7Q96R05 134 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 FARSAQ9Y285 508 aaKnown RBP12.46□□□□□ -0.41
NUB1-201ENST00000413040 SHISA7A6NL88 538 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 H3BML4 177 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 XRCC3O43542 346 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 CTAG2O75638 210 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 NDUFB6O95139 128 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 BGLAPP02818 100 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 LIPCP11150 499 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 FOLR1P15328 257 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 DNASE1L1P49184 302 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 ARRB1P49407 418 aaPredicted RBP12.46□□□□□ -0.41
NUB1-201ENST00000413040 INSM1Q01101 510 aaPredicted RBP12.46□□□□□ -0.41
NUB1-201ENST00000413040 FMODQ06828 376 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 EGR3Q06889 387 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 MFGE8Q08431 387 aaPredicted RBP12.46□□□□□ -0.41
NUB1-201ENST00000413040 EMC4Q5J8M3 183 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 C5orf34Q96MH7 638 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 MRI1Q9BV20 369 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 B3GNT4Q9C0J1 378 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 ADAM19Q9H013 955 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 TAS2R4Q9NYW5 299 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 FBXL3Q9UKT7 428 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 EMC9Q9Y3B6 208 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 RNF215Q9Y6U7 377 aa12.46□□□□□ -0.41
NUB1-201ENST00000413040 LRP4O75096 1905 aa12.46□□□□□ -0.42
NUB1-201ENST00000413040 LILRA5A6NI73 299 aa12.46□□□□□ -0.42
NUB1-201ENST00000413040 GOSR2O14653 212 aa12.46□□□□□ -0.42
NUB1-201ENST00000413040 ZNF432O94892 652 aa12.46□□□□□ -0.42
NUB1-201ENST00000413040 VSIG10L2P0DP72 767 aa12.46□□□□□ -0.42
NUB1-201ENST00000413040 ZNF823P16415 610 aa12.46□□□□□ -0.42
NUB1-201ENST00000413040 C1orf140Q5VVS0 124 aa12.46□□□□□ -0.42
NUB1-201ENST00000413040 KCTD18Q6PI47 426 aaPredicted RBP12.46□□□□□ -0.42
NUB1-201ENST00000413040 TMEM205Q6UW68 189 aa12.46□□□□□ -0.42
NUB1-201ENST00000413040 ALKAL2Q6UX46 152 aa12.46□□□□□ -0.42
NUB1-201ENST00000413040 ZNF679Q8IYX0 411 aa12.46□□□□□ -0.42
NUB1-201ENST00000413040 CCNL2Q96S94 520 aaPredicted RBP12.46□□□□□ -0.42
NUB1-201ENST00000413040 ABHD6Q9BV23 337 aa12.46□□□□□ -0.42
NUB1-201ENST00000413040 NARFLQ9H6Q4 476 aa12.46□□□□□ -0.42
NUB1-201ENST00000413040 EXOSC3Q9NQT5 275 aaKnown RBP12.46□□□□□ -0.42
NUB1-201ENST00000413040 CKLFQ9UBR5 152 aa12.46□□□□□ -0.42
NUB1-201ENST00000413040 CTSFQ9UBX1 484 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms