RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 UBL3O95164 117 aa20.74■□□□□ 0.91
UBE2E3-202ENST00000410062 CTLA4P16410 223 aa20.74■□□□□ 0.91
UBE2E3-202ENST00000410062 FASP25445 335 aa20.74■□□□□ 0.91
UBE2E3-202ENST00000410062 GIPRP48546 466 aa20.74■□□□□ 0.91
UBE2E3-202ENST00000410062 ARHGDIAP52565 204 aa20.74■□□□□ 0.91
UBE2E3-202ENST00000410062 KEAP1Q14145 624 aa20.74■□□□□ 0.91
UBE2E3-202ENST00000410062 NRN1LQ496H8 165 aa20.74■□□□□ 0.91
UBE2E3-202ENST00000410062 SHQ1Q6PI26 577 aaKnown RBP20.74■□□□□ 0.91
UBE2E3-202ENST00000410062 CD300LDQ6UXZ3 194 aa20.74■□□□□ 0.91
UBE2E3-202ENST00000410062 SLC16A14Q7RTX9 510 aa20.74■□□□□ 0.91
UBE2E3-202ENST00000410062 YTHDF3Q7Z739 585 aaKnown RBP20.74■□□□□ 0.91
UBE2E3-202ENST00000410062 JAZF1Q86VZ6 243 aa20.74■□□□□ 0.91
UBE2E3-202ENST00000410062 PYDC1Q8WXC3 89 aa20.74■□□□□ 0.91
UBE2E3-202ENST00000410062 LRTOMTQ8WZ04 291 aa20.74■□□□□ 0.91
UBE2E3-202ENST00000410062 RADILQ96JH8 1075 aa20.74■□□□□ 0.91
UBE2E3-202ENST00000410062 FOXN4Q96NZ1 517 aa20.74■□□□□ 0.91
UBE2E3-202ENST00000410062 NMNAT3Q96T66 252 aa20.74■□□□□ 0.91
UBE2E3-202ENST00000410062 TSSK6Q9BXA6 273 aa20.74■□□□□ 0.91
UBE2E3-202ENST00000410062 SIAEQ9HAT2 523 aa20.74■□□□□ 0.91
UBE2E3-202ENST00000410062 SLC16A7O60669 478 aa20.73■□□□□ 0.91
UBE2E3-202ENST00000410062 ENTPD5O75356 428 aa20.73■□□□□ 0.91
UBE2E3-202ENST00000410062 RAF1P04049 648 aa20.73■□□□□ 0.91
UBE2E3-202ENST00000410062 NPR2P20594 1047 aa20.73■□□□□ 0.91
UBE2E3-202ENST00000410062 CDH11P55287 796 aa20.73■□□□□ 0.91
UBE2E3-202ENST00000410062 COX10Q12887 443 aa20.73■□□□□ 0.91
UBE2E3-202ENST00000410062 C3orf36Q3SXR2 165 aa20.73■□□□□ 0.91
UBE2E3-202ENST00000410062 LEG1Q6P5S2 330 aa20.73■□□□□ 0.91
UBE2E3-202ENST00000410062 AMIGO2Q86SJ2 522 aa20.73■□□□□ 0.91
UBE2E3-202ENST00000410062 MS4A3Q96HJ5 214 aa20.73■□□□□ 0.91
UBE2E3-202ENST00000410062 ZNF75AQ96N20 296 aa20.73■□□□□ 0.91
UBE2E3-202ENST00000410062 NUAK2Q9H093 628 aa20.73■□□□□ 0.91
UBE2E3-202ENST00000410062 POU2F3Q9UKI9 436 aa20.73■□□□□ 0.91
UBE2E3-202ENST00000410062 CCDC168Q8NDH2 2452 aa20.73■□□□□ 0.91
UBE2E3-202ENST00000410062 ATP6V1G2-DDX39BF2Z307 99 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 IDH3BO43837 385 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 ATE1O95260 518 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 RAB36O95755 333 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 DNASE1P24855 282 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 NAAAQ02083 359 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 DBPQ10586 325 aaPredicted RBP20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 DEPDC4Q8N2C3 294 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 SDR9C7Q8NEX9 313 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 OR52E2Q8NGJ4 325 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 FBXW5Q969U6 566 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 TSSK2Q96PF2 358 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 RAB3IPQ96QF0 476 aaPredicted RBP20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 RNF121Q9H920 327 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 CISD1Q9NZ45 108 aaKnown RBP20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 REV1Q9UBZ9 1251 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 EDARQ9UNE0 448 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 CALCRP30988 508 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 SLC36A2Q495M3 483 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 SLC36A3Q495N2 470 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 B3GLCTQ6Y288 498 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 C20orf204Q6ZNR8 217 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 FOXL2NBQ6ZUU3 175 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 ZNF611Q8N823 705 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 ATG16L2Q8NAA4 619 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 OR4Q3Q8NH05 313 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 OR5K1Q8NHB7 308 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 NRBF2Q96F24 287 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 KCNS3Q9BQ31 491 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 BDH2Q9BUT1 245 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 ZNF556Q9HAH1 456 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 ITGB1BP2Q9UKP3 347 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 ATP23Q9Y6H3 246 aa20.72■□□□□ 0.91
UBE2E3-202ENST00000410062 DSCAMO60469 2012 aa20.71■□□□□ 0.91
UBE2E3-202ENST00000410062 PLCE1Q9P212 2302 aa20.71■□□□□ 0.91
UBE2E3-202ENST00000410062 E7EQL1 145 aa20.71■□□□□ 0.91
UBE2E3-202ENST00000410062 H3BN98 237 aa20.71■□□□□ 0.91
UBE2E3-202ENST00000410062 CRYAAP02489 173 aa20.71■□□□□ 0.91
UBE2E3-202ENST00000410062 SCG5P05408 212 aa20.71■□□□□ 0.91
UBE2E3-202ENST00000410062 FCGR1AP12314 374 aa20.71■□□□□ 0.91
UBE2E3-202ENST00000410062 ANXA8P13928 327 aa20.71■□□□□ 0.91
UBE2E3-202ENST00000410062 ZNF14P17017 642 aaPredicted RBP20.71■□□□□ 0.91
UBE2E3-202ENST00000410062 CD53P19397 219 aa20.71■□□□□ 0.91
UBE2E3-202ENST00000410062 LAP3P28838 519 aa20.71■□□□□ 0.91
UBE2E3-202ENST00000410062 GUCA1AP43080 201 aaPredicted RBP20.71■□□□□ 0.91
UBE2E3-202ENST00000410062 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.71■□□□□ 0.91
UBE2E3-202ENST00000410062 RAB39AQ14964 217 aa20.71■□□□□ 0.91
UBE2E3-202ENST00000410062 NINJ1Q92982 152 aa20.71■□□□□ 0.91
UBE2E3-202ENST00000410062 SEMA6AQ9H2E6 1030 aa20.71■□□□□ 0.91
UBE2E3-202ENST00000410062 FN3KQ9H479 309 aa20.71■□□□□ 0.91
UBE2E3-202ENST00000410062 COA3Q9Y2R0 106 aaPredicted RBP20.71■□□□□ 0.91
UBE2E3-202ENST00000410062 DCTN6O00399 190 aa20.7■□□□□ 0.9
UBE2E3-202ENST00000410062 KHDRBS3O75525 346 aaKnown RBP20.7■□□□□ 0.9
UBE2E3-202ENST00000410062 RENP00797 406 aa20.7■□□□□ 0.9
UBE2E3-202ENST00000410062 FAM27BQ5VT28 67 aa20.7■□□□□ 0.9
UBE2E3-202ENST00000410062 OTPQ5XKR4 325 aa20.7■□□□□ 0.9
UBE2E3-202ENST00000410062 TMEM53Q6P2H8 277 aa20.7■□□□□ 0.9
UBE2E3-202ENST00000410062 ZNF584Q8IVC4 421 aa20.7■□□□□ 0.9
UBE2E3-202ENST00000410062 LNX2Q8N448 690 aa20.7■□□□□ 0.9
UBE2E3-202ENST00000410062 OR2T33Q8NG76 320 aa20.7■□□□□ 0.9
UBE2E3-202ENST00000410062 TEX47Q8TBZ9 253 aa20.7■□□□□ 0.9
UBE2E3-202ENST00000410062 FBXO17Q96EF6 278 aa20.7■□□□□ 0.9
UBE2E3-202ENST00000410062 CCL19Q99731 98 aa20.7■□□□□ 0.9
UBE2E3-202ENST00000410062 KCNN2Q9H2S1 579 aa20.7■□□□□ 0.9
UBE2E3-202ENST00000410062 SRA1Q9HD15 236 aaKnown RBP20.7■□□□□ 0.9
UBE2E3-202ENST00000410062 RPRD1BQ9NQG5 326 aaKnown RBP20.7■□□□□ 0.9
UBE2E3-202ENST00000410062 POLE4Q9NR33 117 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms