RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 HIVEP3Q5T1R4 2406 aa11.1□□□□□ -0.63
PMS1-204ENST00000409823 A0A096LPE4 126 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 A0A1W2PPZ6 126 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 SNTNA6NMZ2 147 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 PYCARD-AS1I3L0S3 204 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 PSMD9O00233 223 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 MAGEB4O15481 346 aaPredicted RBP11.09□□□□□ -0.63
PMS1-204ENST00000409823 HTR1AP08908 422 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 CCDC159P0C7I6 412 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 B4GALT1P15291 398 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 SLC35A2P78381 396 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 TSC22D1Q15714 1073 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 SGCAQ16586 387 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 RBM48Q5RL73 367 aaKnown RBP11.09□□□□□ -0.63
PMS1-204ENST00000409823 SLC25A47Q6Q0C1 308 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 CORO6Q6QEF8 472 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 DPY19L4Q7Z388 723 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 GLB1L2Q8IW92 636 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 STX19Q8N4C7 294 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 OR10H4Q8NGA5 316 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 OR52I1Q8NGK6 324 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 GLRX2Q9NS18 164 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 TPRKBQ9Y3C4 175 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 CCL21O00585 134 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 DHHO43323 396 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 KHDRBS3O75525 346 aaKnown RBP11.09□□□□□ -0.63
PMS1-204ENST00000409823 GNLYP22749 145 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 TIMP3P35625 211 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 SLC15A1P46059 708 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 CASP6P55212 293 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 CXCR4P61073 352 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 ADAM8P78325 824 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 SOWAHCQ53LP3 525 aaPredicted RBP11.09□□□□□ -0.63
PMS1-204ENST00000409823 TFAP2EQ6VUC0 442 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 LHFPL3Q86UP9 236 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 LINC00346Q8IVM7 164 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 ZNF610Q8N9Z0 462 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 OR6N2Q8NGY6 317 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 NR1H4Q96RI1 486 aaPredicted RBP11.09□□□□□ -0.63
PMS1-204ENST00000409823 GPR35Q9HC97 309 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 CLEC2DQ9UHP7 191 aa11.09□□□□□ -0.63
PMS1-204ENST00000409823 SBK2P0C263 348 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 TMEM154Q6P9G4 183 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 DNM1P34Q6PK57 102 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 SPATC1Q76KD6 591 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 SNX18Q96RF0 628 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 SH3GL3Q99963 347 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 RACGAP1Q9H0H5 632 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 WARS2Q9UGM6 360 aaKnown RBP11.08□□□□□ -0.64
PMS1-204ENST00000409823 UGT2A1Q9Y4X1 527 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 RTTNQ86VV8 2226 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 UTP20O75691 2785 aaKnown RBP11.08□□□□□ -0.64
PMS1-204ENST00000409823 EEF1E1-BLOC1S5C9J1V9 151 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 ZNF587BE7ETH6 402 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 ZNF593O00488 134 aaPredicted RBP11.08□□□□□ -0.64
PMS1-204ENST00000409823 EEF1E1O43324 174 aaKnown RBP11.08□□□□□ -0.64
PMS1-204ENST00000409823 LYZL6O75951 148 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 SPARCP09486 303 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 PATE4P0C8F1 98 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 LAP3P28838 519 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 CA7P43166 264 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 OR3A2P47893 321 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 FBXW9Q5XUX1 488 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 ATCAYQ86WG3 371 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 ZNF843Q8N446 348 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 SLC26A10Q8NG04 563 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 C11orf40Q8WZ69 217 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 CNN2Q99439 309 aaKnown RBP11.08□□□□□ -0.64
PMS1-204ENST00000409823 DUSP21Q9H596 190 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 GP6Q9HCN6 339 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 PLCXD1Q9NUJ7 323 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 BLOC1S6Q9UL45 172 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 MEMO1Q9Y316 297 aa11.08□□□□□ -0.64
PMS1-204ENST00000409823 C12orf71A8MTZ7 269 aa11.07□□□□□ -0.64
PMS1-204ENST00000409823 C1QL1O75973 258 aa11.07□□□□□ -0.64
PMS1-204ENST00000409823 FADS2O95864 444 aaKnown RBP11.07□□□□□ -0.64
PMS1-204ENST00000409823 CEACAM8P31997 349 aaPredicted RBP11.07□□□□□ -0.64
PMS1-204ENST00000409823 MAP2K4P45985 399 aa11.07□□□□□ -0.64
PMS1-204ENST00000409823 TEKQ02763 1124 aa11.07□□□□□ -0.64
PMS1-204ENST00000409823 HSF2Q03933 536 aa11.07□□□□□ -0.64
PMS1-204ENST00000409823 SLC35D3Q5M8T2 416 aa11.07□□□□□ -0.64
PMS1-204ENST00000409823 SSX6Q7RTT6 188 aa11.07□□□□□ -0.64
PMS1-204ENST00000409823 LIX1LQ8IVB5 337 aa11.07□□□□□ -0.64
PMS1-204ENST00000409823 TIGD4Q8IY51 512 aa11.07□□□□□ -0.64
PMS1-204ENST00000409823 TSPAN14Q8NG11 270 aa11.07□□□□□ -0.64
PMS1-204ENST00000409823 KCNG2Q9UJ96 466 aa11.07□□□□□ -0.64
PMS1-204ENST00000409823 MOKQ9UQ07 419 aa11.07□□□□□ -0.64
PMS1-204ENST00000409823 KLHDC2Q9Y2U9 406 aa11.07□□□□□ -0.64
PMS1-204ENST00000409823 LRRTM2O43300 516 aa11.07□□□□□ -0.64
PMS1-204ENST00000409823 RGS10O43665 173 aa11.07□□□□□ -0.64
PMS1-204ENST00000409823 AHCYL1O43865 530 aa11.07□□□□□ -0.64
PMS1-204ENST00000409823 MT-ND2P03891 347 aa11.07□□□□□ -0.64
PMS1-204ENST00000409823 HOXD4P09016 255 aaPredicted RBP11.07□□□□□ -0.64
PMS1-204ENST00000409823 GAAP10253 952 aa11.07□□□□□ -0.64
PMS1-204ENST00000409823 CD79BP40259 229 aa11.07□□□□□ -0.64
PMS1-204ENST00000409823 GUCA1AP43080 201 aaPredicted RBP11.07□□□□□ -0.64
PMS1-204ENST00000409823 ARF1P84077 181 aaKnown RBP11.07□□□□□ -0.64
PMS1-204ENST00000409823 RAB40BQ12829 278 aa11.07□□□□□ -0.64
PMS1-204ENST00000409823 LCN1P1Q5VSP4 162 aa11.07□□□□□ -0.64
PMS1-204ENST00000409823 KLHL24Q6TFL4 600 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms