RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 RFX4Q33E94 735 aa27.03■■□□□ 1.92
TRAF3IP1-203ENST00000409739 ZNF544Q6NX49 715 aa27.03■■□□□ 1.92
TRAF3IP1-203ENST00000409739 ZNF620Q6ZNG0 422 aa27.03■■□□□ 1.92
TRAF3IP1-203ENST00000409739 SLC22A23A1A5C7 686 aa27.02■■□□□ 1.92
TRAF3IP1-203ENST00000409739 PRSS37A4D1T9 235 aa27.02■■□□□ 1.92
TRAF3IP1-203ENST00000409739 SOCS2O14508 198 aa27.02■■□□□ 1.92
TRAF3IP1-203ENST00000409739 PPP1R3DO95685 299 aa27.02■■□□□ 1.92
TRAF3IP1-203ENST00000409739 SLC6A6P31641 620 aa27.02■■□□□ 1.92
TRAF3IP1-203ENST00000409739 FABP6P51161 128 aa27.02■■□□□ 1.92
TRAF3IP1-203ENST00000409739 RPS6KA3P51812 740 aa27.02■■□□□ 1.92
TRAF3IP1-203ENST00000409739 ADAM8P78325 824 aa27.02■■□□□ 1.92
TRAF3IP1-203ENST00000409739 AGAP6Q5VW22 663 aa27.02■■□□□ 1.92
TRAF3IP1-203ENST00000409739 SLC16A14Q7RTX9 510 aa27.02■■□□□ 1.92
TRAF3IP1-203ENST00000409739 DPPA2Q7Z7J5 298 aa27.02■■□□□ 1.92
TRAF3IP1-203ENST00000409739 FBXL14Q8N1E6 418 aa27.02■■□□□ 1.92
TRAF3IP1-203ENST00000409739 MUC15Q8N387 334 aa27.02■■□□□ 1.92
TRAF3IP1-203ENST00000409739 LRRC18Q8N456 261 aa27.02■■□□□ 1.92
TRAF3IP1-203ENST00000409739 GRIP2Q9C0E4 1043 aa27.02■■□□□ 1.92
TRAF3IP1-203ENST00000409739 LRMDAQ9H2I8 198 aa27.02■■□□□ 1.92
TRAF3IP1-203ENST00000409739 SIAEQ9HAT2 523 aa27.02■■□□□ 1.92
TRAF3IP1-203ENST00000409739 ZNF469Q96JG9 3925 aaPredicted RBP27.02■■□□□ 1.92
TRAF3IP1-203ENST00000409739 FLNAP21333 2647 aaKnown RBP27.01■■□□□ 1.91
TRAF3IP1-203ENST00000409739 AHCYL1O43865 530 aa27.01■■□□□ 1.91
TRAF3IP1-203ENST00000409739 TXNDC12O95881 172 aa27.01■■□□□ 1.91
TRAF3IP1-203ENST00000409739 CST1P01037 141 aa27.01■■□□□ 1.91
TRAF3IP1-203ENST00000409739 APEHP13798 732 aaKnown RBP27.01■■□□□ 1.91
TRAF3IP1-203ENST00000409739 HOXB6P17509 224 aaKnown RBP27.01■■□□□ 1.91
TRAF3IP1-203ENST00000409739 NPR2P20594 1047 aa27.01■■□□□ 1.91
TRAF3IP1-203ENST00000409739 ERFP50548 548 aa27.01■■□□□ 1.91
TRAF3IP1-203ENST00000409739 RAB39AQ14964 217 aa27.01■■□□□ 1.91
TRAF3IP1-203ENST00000409739 SLC36A2Q495M3 483 aa27.01■■□□□ 1.91
TRAF3IP1-203ENST00000409739 C11orf71Q6IPW1 123 aa27.01■■□□□ 1.91
TRAF3IP1-203ENST00000409739 FOXL2NBQ6ZUU3 175 aa27.01■■□□□ 1.91
TRAF3IP1-203ENST00000409739 ZNF584Q8IVC4 421 aa27.01■■□□□ 1.91
TRAF3IP1-203ENST00000409739 IL17RDQ8NFM7 739 aa27.01■■□□□ 1.91
TRAF3IP1-203ENST00000409739 GTPBP3Q969Y2 492 aaKnown RBP27.01■■□□□ 1.91
TRAF3IP1-203ENST00000409739 SAMD8Q96LT4 415 aa27.01■■□□□ 1.91
TRAF3IP1-203ENST00000409739 CBLN4Q9NTU7 201 aa27.01■■□□□ 1.91
TRAF3IP1-203ENST00000409739 FBXL3Q9UKT7 428 aa27.01■■□□□ 1.91
TRAF3IP1-203ENST00000409739 MGRN1O60291 552 aa27■■□□□ 1.91
TRAF3IP1-203ENST00000409739 CDKN1AP38936 164 aa27■■□□□ 1.91
TRAF3IP1-203ENST00000409739 HGFACQ04756 655 aa27■■□□□ 1.91
TRAF3IP1-203ENST00000409739 MICAQ29983 383 aa27■■□□□ 1.91
TRAF3IP1-203ENST00000409739 Q5PR19 223 aa27■■□□□ 1.91
TRAF3IP1-203ENST00000409739 TMEM53Q6P2H8 277 aa27■■□□□ 1.91
TRAF3IP1-203ENST00000409739 PTCHD4Q6ZW05 846 aa27■■□□□ 1.91
TRAF3IP1-203ENST00000409739 ADCK1Q86TW2 530 aa27■■□□□ 1.91
TRAF3IP1-203ENST00000409739 AQP11Q8NBQ7 271 aa27■■□□□ 1.91
TRAF3IP1-203ENST00000409739 WFDC11Q8NEX6 87 aa27■■□□□ 1.91
TRAF3IP1-203ENST00000409739 OR4F15Q8NGB8 312 aa27■■□□□ 1.91
TRAF3IP1-203ENST00000409739 ERMAPQ96PL5 475 aaPredicted RBP27■■□□□ 1.91
TRAF3IP1-203ENST00000409739 CA10Q9NS85 328 aa27■■□□□ 1.91
TRAF3IP1-203ENST00000409739 TEP1Q99973 2627 aaKnown RBP26.99■■□□□ 1.91
TRAF3IP1-203ENST00000409739 GASTP01350 101 aa26.99■■□□□ 1.91
TRAF3IP1-203ENST00000409739 APOBEC3AP31941 199 aaPredicted RBP26.99■■□□□ 1.91
TRAF3IP1-203ENST00000409739 SGCAQ16586 387 aa26.99■■□□□ 1.91
TRAF3IP1-203ENST00000409739 TGIF2LYQ8IUE0 185 aa26.99■■□□□ 1.91
TRAF3IP1-203ENST00000409739 NUP37Q8NFH4 326 aa26.99■■□□□ 1.91
TRAF3IP1-203ENST00000409739 SYT4Q9H2B2 425 aa26.99■■□□□ 1.91
TRAF3IP1-203ENST00000409739 EGLN3Q9H6Z9 239 aa26.99■■□□□ 1.91
TRAF3IP1-203ENST00000409739 RNF121Q9H920 327 aa26.99■■□□□ 1.91
TRAF3IP1-203ENST00000409739 VSX1Q9NZR4 365 aaPredicted RBP26.99■■□□□ 1.91
TRAF3IP1-203ENST00000409739 CDH10Q9Y6N8 788 aa26.99■■□□□ 1.91
TRAF3IP1-203ENST00000409739 A0A1W2PPL8 197 aa26.98■■□□□ 1.91
TRAF3IP1-203ENST00000409739 IMPA2O14732 288 aa26.98■■□□□ 1.91
TRAF3IP1-203ENST00000409739 SERPINA5P05154 406 aa26.98■■□□□ 1.91
TRAF3IP1-203ENST00000409739 MMP7P09237 267 aaPredicted RBP26.98■■□□□ 1.91
TRAF3IP1-203ENST00000409739 CTLA4P16410 223 aa26.98■■□□□ 1.91
TRAF3IP1-203ENST00000409739 GK3PQ14409 553 aa26.98■■□□□ 1.91
TRAF3IP1-203ENST00000409739 ETFDHQ16134 617 aa26.98■■□□□ 1.91
TRAF3IP1-203ENST00000409739 SHEQ5VZ18 495 aa26.98■■□□□ 1.91
TRAF3IP1-203ENST00000409739 IFT27Q9BW83 186 aa26.98■■□□□ 1.91
TRAF3IP1-203ENST00000409739 MMADHCQ9H3L0 296 aaPredicted RBP26.98■■□□□ 1.91
TRAF3IP1-203ENST00000409739 ARPC3O15145 178 aa26.97■■□□□ 1.91
TRAF3IP1-203ENST00000409739 FKBP6O75344 327 aa26.97■■□□□ 1.91
TRAF3IP1-203ENST00000409739 ZNF35P13682 527 aa26.97■■□□□ 1.91
TRAF3IP1-203ENST00000409739 CDKN2AP42771 156 aaKnown RBP26.97■■□□□ 1.91
TRAF3IP1-203ENST00000409739 ATP5J2P56134 94 aa26.97■■□□□ 1.91
TRAF3IP1-203ENST00000409739 FAM27BQ5VT28 67 aa26.97■■□□□ 1.91
TRAF3IP1-203ENST00000409739 OR10G2Q8NGC3 310 aa26.97■■□□□ 1.91
TRAF3IP1-203ENST00000409739 DGCR6LQ9BY27 220 aa26.97■■□□□ 1.91
TRAF3IP1-203ENST00000409739 RPL13AP3Q6NVV1 102 aa26.96■■□□□ 1.91
TRAF3IP1-203ENST00000409739 VHLLQ6RSH7 139 aa26.96■■□□□ 1.91
TRAF3IP1-203ENST00000409739 PAPD5Q8NDF8 572 aaKnown RBP26.96■■□□□ 1.91
TRAF3IP1-203ENST00000409739 SLCO4A1Q96BD0 722 aa26.96■■□□□ 1.91
TRAF3IP1-203ENST00000409739 FBXO17Q96EF6 278 aa26.96■■□□□ 1.91
TRAF3IP1-203ENST00000409739 CACNG6Q9BXT2 260 aa26.96■■□□□ 1.91
TRAF3IP1-203ENST00000409739 KCNN2Q9H2S1 579 aa26.96■■□□□ 1.91
TRAF3IP1-203ENST00000409739 ACANP16112 2415 aa26.95■■□□□ 1.9
TRAF3IP1-203ENST00000409739 ZNF32P17041 273 aa26.95■■□□□ 1.9
TRAF3IP1-203ENST00000409739 LAP3P28838 519 aa26.95■■□□□ 1.9
TRAF3IP1-203ENST00000409739 GUCA1AP43080 201 aaPredicted RBP26.95■■□□□ 1.9
TRAF3IP1-203ENST00000409739 CBX1P83916 185 aa26.95■■□□□ 1.9
TRAF3IP1-203ENST00000409739 SNTB2Q13425 540 aaKnown RBP26.95■■□□□ 1.9
TRAF3IP1-203ENST00000409739 KRT80Q6KB66 452 aa26.95■■□□□ 1.9
TRAF3IP1-203ENST00000409739 PRSS57Q6UWY2 283 aa26.95■■□□□ 1.9
TRAF3IP1-203ENST00000409739 RASSF6Q6ZTQ3 369 aa26.95■■□□□ 1.9
TRAF3IP1-203ENST00000409739 TMEM179BQ7Z7N9 219 aa26.95■■□□□ 1.9
TRAF3IP1-203ENST00000409739 OR52L1Q8NGH7 329 aa26.95■■□□□ 1.9
TRAF3IP1-203ENST00000409739 PLA2G12AQ9BZM1 189 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms