RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 CACNA1CQ13936 2221 aa13.86□□□□□ -0.19
SHANK2-204ENST00000409530 TMEM8BA6NDV4 472 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 TTLL8A6PVC2 850 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 J3QLW9 94 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 LRRTM2O43300 516 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 ZNF432O94892 652 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 IGHA1P01876 353 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 ZNF19P17023 458 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 ALDH3B2P48448 385 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 ZNF85Q03923 595 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 GGTLC2Q14390 218 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 IRF3Q14653 427 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 THEM4Q5T1C6 240 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 GPR107Q5VW38 600 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 NUFIP2Q7Z417 695 aaKnown RBP13.85□□□□□ -0.19
SHANK2-204ENST00000409530 CLVS1Q8IUQ0 354 aaPredicted RBP13.85□□□□□ -0.19
SHANK2-204ENST00000409530 TIGD4Q8IY51 512 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 CNEP1R1Q8N9A8 125 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 C4orf36Q96KX1 117 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 NAA50Q9GZZ1 169 aaKnown RBP13.85□□□□□ -0.19
SHANK2-204ENST00000409530 RACGAP1Q9H0H5 632 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 SLC25A18Q9H1K4 315 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 CRLF2Q9HC73 371 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 MRPS18AQ9NVS2 196 aaKnown RBP13.85□□□□□ -0.19
SHANK2-204ENST00000409530 LAMP5Q9UJQ1 280 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 ZNF593O00488 134 aaPredicted RBP13.85□□□□□ -0.19
SHANK2-204ENST00000409530 WNT11O96014 354 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 SCG5P05408 212 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 SGCAQ16586 387 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 TSTQ16762 297 aaKnown RBP13.85□□□□□ -0.19
SHANK2-204ENST00000409530 FOXB2Q5VYV0 432 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 KLBQ86Z14 1044 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 LRRC18Q8N456 261 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 KLHL36Q8N4N3 616 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 NANOGP1Q8N7R0 232 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 KDF1Q8NAX2 398 aaPredicted RBP13.85□□□□□ -0.19
SHANK2-204ENST00000409530 OR10H5Q8NGA6 315 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 SNX33Q8WV41 574 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 INTS12Q96CB8 462 aaKnown RBP13.85□□□□□ -0.19
SHANK2-204ENST00000409530 SNX18Q96RF0 628 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 AMELYQ99218 206 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 HAO2Q9NYQ3 351 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 GNG8Q9UK08 70 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 IKZF2Q9UKS7 526 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 GRIP1Q9Y3R0 1128 aa13.85□□□□□ -0.19
SHANK2-204ENST00000409530 ARHGAP21Q5T5U3 1957 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 PRR32B1ATL7 298 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 H3BSA7 217 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 J3QRE1 110 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 ZNF823P16415 610 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 OR12D2P58182 307 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 RNPS1Q15287 305 aaKnown RBP13.84□□□□□ -0.19
SHANK2-204ENST00000409530 SPHARQ15513 63 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 ACSF3Q4G176 576 aaPredicted RBP13.84□□□□□ -0.19
SHANK2-204ENST00000409530 ARMCX4Q5H9R4 360 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 TSPO2Q5TGU0 170 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 GFRALQ6UXV0 394 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 LINGO2Q7L985 606 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 SLC16A9Q7RTY1 509 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 GLB1L2Q8IW92 636 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 ZNF100Q8IYN0 542 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 C9orf106Q8NAJ2 232 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 SLC26A10Q8NG04 563 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 C11orf40Q8WZ69 217 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 CLCF1Q9UBD9 225 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 GPR171O14626 319 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 LALBAP00709 142 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 YES1P07947 543 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 FCGR2AP12318 317 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 B4GALT1P15291 398 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 AGTR1P30556 359 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 LIPAP38571 399 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 PER3P56645 1201 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 WNT4P56705 351 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 ACTC1P68032 377 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 ACTA1P68133 377 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 EIF2B1Q14232 305 aaKnown RBP13.84□□□□□ -0.19
SHANK2-204ENST00000409530 ZNF367Q7RTV3 350 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 NMD3Q96D46 503 aaKnown RBP13.84□□□□□ -0.19
SHANK2-204ENST00000409530 MGLLQ99685 303 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 CDADC1Q9BWV3 514 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 ACOXLQ9NUZ1 547 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 TUBD1Q9UJT1 453 aa13.84□□□□□ -0.19
SHANK2-204ENST00000409530 FOXD3Q9UJU5 478 aaPredicted RBP13.84□□□□□ -0.19
SHANK2-204ENST00000409530 ZGRF1Q86YA3 2104 aa13.83□□□□□ -0.19
SHANK2-204ENST00000409530 DOCK7Q96N67 2140 aa13.83□□□□□ -0.19
SHANK2-204ENST00000409530 ZNF670-ZNF695F2Z2N8 137 aa13.83□□□□□ -0.2
SHANK2-204ENST00000409530 RPP14O95059 124 aaKnown RBP13.83□□□□□ -0.2
SHANK2-204ENST00000409530 OR8G3PP0DMU2 310 aa13.83□□□□□ -0.2
SHANK2-204ENST00000409530 GAAP10253 952 aa13.83□□□□□ -0.2
SHANK2-204ENST00000409530 LAP3P28838 519 aa13.83□□□□□ -0.2
SHANK2-204ENST00000409530 PSMB10P40306 273 aa13.83□□□□□ -0.2
SHANK2-204ENST00000409530 ENTPD1P49961 510 aa13.83□□□□□ -0.2
SHANK2-204ENST00000409530 TDGF1P3P51864 188 aa13.83□□□□□ -0.2
SHANK2-204ENST00000409530 LSM3P62310 102 aaKnown RBP13.83□□□□□ -0.2
SHANK2-204ENST00000409530 HSF2Q03933 536 aa13.83□□□□□ -0.2
SHANK2-204ENST00000409530 TMED1Q13445 227 aa13.83□□□□□ -0.2
SHANK2-204ENST00000409530 UBE2UQ5VVX9 321 aa13.83□□□□□ -0.2
SHANK2-204ENST00000409530 LIPKQ5VXJ0 399 aa13.83□□□□□ -0.2
SHANK2-204ENST00000409530 C20orf196Q8IYI0 205 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms