RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 MNTQ99583 582 aa11.47□□□□□ -0.57
LIMS2-203ENST00000409254 FOXB1Q99853 325 aa11.47□□□□□ -0.57
LIMS2-203ENST00000409254 NUAK2Q9H093 628 aa11.47□□□□□ -0.57
LIMS2-203ENST00000409254 RPRD1BQ9NQG5 326 aaKnown RBP11.47□□□□□ -0.57
LIMS2-203ENST00000409254 CLN6Q9NWW5 311 aa11.47□□□□□ -0.57
LIMS2-203ENST00000409254 B9D1Q9UPM9 204 aa11.47□□□□□ -0.57
LIMS2-203ENST00000409254 GPR52Q9Y2T5 361 aa11.47□□□□□ -0.57
LIMS2-203ENST00000409254 USP9YO00507 2555 aaPredicted RBP11.46□□□□□ -0.57
LIMS2-203ENST00000409254 EEF1E1-BLOC1S5C9J1V9 151 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 J3QKU1 62 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 EEF1E1O43324 174 aaKnown RBP11.46□□□□□ -0.57
LIMS2-203ENST00000409254 SLC16A7O60669 478 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 SMNDC1O75940 238 aaKnown RBP eCLIP11.46□□□□□ -0.57
LIMS2-203ENST00000409254 FARS2O95363 451 aaKnown RBP11.46□□□□□ -0.57
LIMS2-203ENST00000409254 SLC2A10O95528 541 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 ITGA5P08648 1049 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 GAAP10253 952 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 PLA2G2AP14555 144 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 MSR1P21757 451 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 LAP3P28838 519 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 HTR1FP30939 366 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 FMO3P31513 532 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 CD79BP40259 229 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 FAPQ12884 760 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 PCK2Q16822 640 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 CEACAM16Q2WEN9 425 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 C6orf52Q5T4I8 152 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 CARD17Q5XLA6 110 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 PLBD1Q6P4A8 553 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 RHOUQ7L0Q8 258 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 EGFL6Q8IUX8 553 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 WDFY1Q8IWB7 410 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 ZNF433Q8N7K0 673 aaPredicted RBP11.46□□□□□ -0.57
LIMS2-203ENST00000409254 CYB561A3Q8NBI2 242 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 PROKR2Q8NFJ6 384 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 SLC26A10Q8NG04 563 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 ITLN2Q8WWU7 325 aaPredicted RBP11.46□□□□□ -0.57
LIMS2-203ENST00000409254 RNASE6Q93091 150 aaKnown RBP11.46□□□□□ -0.57
LIMS2-203ENST00000409254 KISS1RQ969F8 398 aaPredicted RBP11.46□□□□□ -0.57
LIMS2-203ENST00000409254 ZNF775Q96BV0 537 aaPredicted RBP11.46□□□□□ -0.57
LIMS2-203ENST00000409254 MUS81Q96NY9 551 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 IL4I1Q96RQ9 567 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 SIAEQ9HAT2 523 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 PLCXD1Q9NUJ7 323 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 MRPS18AQ9NVS2 196 aaKnown RBP11.46□□□□□ -0.57
LIMS2-203ENST00000409254 TMEM38BQ9NVV0 291 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 ZNF226Q9NYT6 803 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 H2AFY2Q9P0M6 372 aaPredicted RBP11.46□□□□□ -0.57
LIMS2-203ENST00000409254 ATPIF1Q9UII2 106 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 FBXL3Q9UKT7 428 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 UGT2A1Q9Y4X1 527 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 LRRC42Q9Y546 428 aa11.46□□□□□ -0.57
LIMS2-203ENST00000409254 CADP27708 2225 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 ARPC4-TTLL3A0A0A6YYG9 625 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 H7C1C5 153 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 CLDN14O95500 239 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 GNAO1P09471 354 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 CCDC159P0C7I6 412 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 OR8G3PP0DMU2 310 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 IGHV1-2P23083 117 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 CDH11P55287 796 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 PCBD1P61457 104 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 LCN6P62502 163 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 IL5RAQ01344 420 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 FMODQ06828 376 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 C3orf36Q3SXR2 165 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 SFRP5Q5T4F7 317 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 LINC01590Q5TEZ4 76 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 FAM27BQ5VT28 67 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 KRT80Q6KB66 452 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 ZNF474Q6S9Z5 364 aaPredicted RBP11.45□□□□□ -0.58
LIMS2-203ENST00000409254 MEPCEQ7L2J0 689 aaKnown RBP11.45□□□□□ -0.58
LIMS2-203ENST00000409254 LINGO2Q7L985 606 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 FAM169BQ8N8A8 192 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 ZNF610Q8N9Z0 462 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 NANOS1Q8WY41 292 aaKnown RBP11.45□□□□□ -0.58
LIMS2-203ENST00000409254 NABP1Q96AH0 204 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 ZNF582Q96NG8 517 aaPredicted RBP11.45□□□□□ -0.58
LIMS2-203ENST00000409254 MYCBPQ99417 103 aaPredicted RBP11.45□□□□□ -0.58
LIMS2-203ENST00000409254 RBM24Q9BX46 236 aaKnown RBP11.45□□□□□ -0.58
LIMS2-203ENST00000409254 YTHDF1Q9BYJ9 559 aaKnown RBP11.45□□□□□ -0.58
LIMS2-203ENST00000409254 OPN3Q9H1Y3 402 aaPredicted RBP11.45□□□□□ -0.58
LIMS2-203ENST00000409254 SLC24A3Q9HC58 644 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 KCNJ16Q9NPI9 418 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 POLE4Q9NR33 117 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 PRSS50Q9UI38 385 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 RPL36Q9Y3U8 105 aaKnown RBP11.45□□□□□ -0.58
LIMS2-203ENST00000409254 PCDHGB1Q9Y5G3 927 aa11.45□□□□□ -0.58
LIMS2-203ENST00000409254 KLF2Q9Y5W3 355 aaPredicted RBP11.45□□□□□ -0.58
LIMS2-203ENST00000409254 PKDREJQ9NTG1 2253 aa11.44□□□□□ -0.58
LIMS2-203ENST00000409254 FAM183AA6NL82 134 aa11.44□□□□□ -0.58
LIMS2-203ENST00000409254 DCTN6O00399 190 aa11.44□□□□□ -0.58
LIMS2-203ENST00000409254 TMCC2O75069 709 aa11.44□□□□□ -0.58
LIMS2-203ENST00000409254 CST2P09228 141 aa11.44□□□□□ -0.58
LIMS2-203ENST00000409254 PIPP12273 146 aaPredicted RBP11.44□□□□□ -0.58
LIMS2-203ENST00000409254 EDNRAP25101 427 aa11.44□□□□□ -0.58
LIMS2-203ENST00000409254 HOXC12P31275 282 aa11.44□□□□□ -0.58
LIMS2-203ENST00000409254 MTNR1AP48039 350 aa11.44□□□□□ -0.58
LIMS2-203ENST00000409254 MED21Q13503 144 aa11.44□□□□□ -0.58
LIMS2-203ENST00000409254 AQP6Q13520 282 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms