RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 PTGES3Q15185 160 aaKnown RBP18.19■□□□□ 0.5
C4orf48-201ENST00000409248 NCMAPQ5T1S8 102 aa18.19■□□□□ 0.5
C4orf48-201ENST00000409248 LEG1Q6P5S2 330 aa18.19■□□□□ 0.5
C4orf48-201ENST00000409248 ANKRD16Q6P6B7 361 aa18.19■□□□□ 0.5
C4orf48-201ENST00000409248 LINGO2Q7L985 606 aa18.19■□□□□ 0.5
C4orf48-201ENST00000409248 OR52E2Q8NGJ4 325 aa18.19■□□□□ 0.5
C4orf48-201ENST00000409248 RDH12Q96NR8 316 aa18.19■□□□□ 0.5
C4orf48-201ENST00000409248 SNX18Q96RF0 628 aa18.19■□□□□ 0.5
C4orf48-201ENST00000409248 TMEM204Q9BSN7 226 aa18.19■□□□□ 0.5
C4orf48-201ENST00000409248 VCX3BQ9H321 246 aa18.19■□□□□ 0.5
C4orf48-201ENST00000409248 UBTD1Q9HAC8 227 aa18.19■□□□□ 0.5
C4orf48-201ENST00000409248 CRLF2Q9HC73 371 aa18.19■□□□□ 0.5
C4orf48-201ENST00000409248 GPR35Q9HC97 309 aa18.19■□□□□ 0.5
C4orf48-201ENST00000409248 SMPD3Q9NY59 655 aaPredicted RBP18.19■□□□□ 0.5
C4orf48-201ENST00000409248 PLEKHA6Q9Y2H5 1048 aa18.19■□□□□ 0.5
C4orf48-201ENST00000409248 CREBBPQ92793 2442 aa18.19■□□□□ 0.5
C4orf48-201ENST00000409248 ZAR1LA6NP61 321 aa18.18■□□□□ 0.5
C4orf48-201ENST00000409248 QDPRP09417 244 aa18.18■□□□□ 0.5
C4orf48-201ENST00000409248 PAX7P23759 505 aa18.18■□□□□ 0.5
C4orf48-201ENST00000409248 UBE2NP61088 152 aaKnown RBP18.18■□□□□ 0.5
C4orf48-201ENST00000409248 BSPH1Q075Z2 132 aa18.18■□□□□ 0.5
C4orf48-201ENST00000409248 HIST3H3Q16695 136 aa18.18■□□□□ 0.5
C4orf48-201ENST00000409248 CEACAM16Q2WEN9 425 aa18.18■□□□□ 0.5
C4orf48-201ENST00000409248 ZIK1Q3SY52 487 aaPredicted RBP18.18■□□□□ 0.5
C4orf48-201ENST00000409248 TBRG1Q3YBR2 411 aa18.18■□□□□ 0.5
C4orf48-201ENST00000409248 PHYHD1Q5SRE7 291 aa18.18■□□□□ 0.5
C4orf48-201ENST00000409248 THEM4Q5T1C6 240 aa18.18■□□□□ 0.5
C4orf48-201ENST00000409248 TMEM236Q5W0B7 351 aa18.18■□□□□ 0.5
C4orf48-201ENST00000409248 ACSM5Q6NUN0 579 aa18.18■□□□□ 0.5
C4orf48-201ENST00000409248 TMEM108Q6UXF1 575 aa18.18■□□□□ 0.5
C4orf48-201ENST00000409248 C20orf204Q6ZNR8 217 aa18.18■□□□□ 0.5
C4orf48-201ENST00000409248 PTCHD4Q6ZW05 846 aa18.18■□□□□ 0.5
C4orf48-201ENST00000409248 SDR9C7Q8NEX9 313 aa18.18■□□□□ 0.5
C4orf48-201ENST00000409248 PLEKHA8Q96JA3 519 aa18.18■□□□□ 0.5
C4orf48-201ENST00000409248 SLC38A2Q96QD8 506 aa18.18■□□□□ 0.5
C4orf48-201ENST00000409248 NMNAT3Q96T66 252 aa18.18■□□□□ 0.5
C4orf48-201ENST00000409248 LIME1Q9H400 295 aa18.18■□□□□ 0.5
C4orf48-201ENST00000409248 TOR3AQ9H497 397 aa18.18■□□□□ 0.5
C4orf48-201ENST00000409248 MOV10Q9HCE1 1003 aaKnown RBP18.18■□□□□ 0.5
C4orf48-201ENST00000409248 CMC2Q9NRP2 79 aa18.18■□□□□ 0.5
C4orf48-201ENST00000409248 NPAP1Q9NZP6 1156 aa18.18■□□□□ 0.5
C4orf48-201ENST00000409248 VSX1Q9NZR4 365 aaPredicted RBP18.18■□□□□ 0.5
C4orf48-201ENST00000409248 AKAP6Q13023 2319 aa18.18■□□□□ 0.5
C4orf48-201ENST00000409248 PRR14LQ5THK1 2151 aa18.18■□□□□ 0.5
C4orf48-201ENST00000409248 SLC22A23A1A5C7 686 aa18.17■□□□□ 0.5
C4orf48-201ENST00000409248 ZNF3P17036 446 aa18.17■□□□□ 0.5
C4orf48-201ENST00000409248 EPHA2P29317 976 aa18.17■□□□□ 0.5
C4orf48-201ENST00000409248 CDKN2AP42771 156 aaKnown RBP18.17■□□□□ 0.5
C4orf48-201ENST00000409248 HIKESHIQ53FT3 197 aa18.17■□□□□ 0.5
C4orf48-201ENST00000409248 SLX4IPQ5VYV7 408 aa18.17■□□□□ 0.5
C4orf48-201ENST00000409248 WDR31Q8NA23 367 aa18.17■□□□□ 0.5
C4orf48-201ENST00000409248 MCHR2Q969V1 340 aa18.17■□□□□ 0.5
C4orf48-201ENST00000409248 SYT4Q9H2B2 425 aa18.17■□□□□ 0.5
C4orf48-201ENST00000409248 RAI1Q7Z5J4 1906 aaPredicted RBP18.16■□□□□ 0.5
C4orf48-201ENST00000409248 A0A1W2PR80 420 aa18.16■□□□□ 0.5
C4orf48-201ENST00000409248 ZNF99A8MXY4 864 aaPredicted RBP18.16■□□□□ 0.5
C4orf48-201ENST00000409248 DHHO43323 396 aa18.16■□□□□ 0.5
C4orf48-201ENST00000409248 SNAP29O95721 258 aa18.16■□□□□ 0.5
C4orf48-201ENST00000409248 HOXB1P14653 301 aaPredicted RBP18.16■□□□□ 0.5
C4orf48-201ENST00000409248 PTAFRP25105 342 aa18.16■□□□□ 0.5
C4orf48-201ENST00000409248 POLR2IP36954 125 aaKnown RBP18.16■□□□□ 0.5
C4orf48-201ENST00000409248 ZNF83P51522 516 aa18.16■□□□□ 0.5
C4orf48-201ENST00000409248 ZNF84P51523 738 aa18.16■□□□□ 0.5
C4orf48-201ENST00000409248 ARF1P84077 181 aaKnown RBP18.16■□□□□ 0.5
C4orf48-201ENST00000409248 FMODQ06828 376 aa18.16■□□□□ 0.5
C4orf48-201ENST00000409248 LRFN4Q6PJG9 635 aa18.16■□□□□ 0.5
C4orf48-201ENST00000409248 DNM1P34Q6PK57 102 aa18.16■□□□□ 0.5
C4orf48-201ENST00000409248 SLC37A3Q8NCC5 494 aa18.16■□□□□ 0.5
C4orf48-201ENST00000409248 NRG4Q8WWG1 115 aa18.16■□□□□ 0.5
C4orf48-201ENST00000409248 BCL2L2Q92843 193 aaPredicted RBP18.16■□□□□ 0.5
C4orf48-201ENST00000409248 NMD3Q96D46 503 aaKnown RBP18.16■□□□□ 0.5
C4orf48-201ENST00000409248 MBOAT4Q96T53 435 aa18.16■□□□□ 0.5
C4orf48-201ENST00000409248 TVP23BQ9NYZ1 205 aa18.16■□□□□ 0.5
C4orf48-201ENST00000409248 ITGB1BP2Q9UKP3 347 aa18.16■□□□□ 0.5
C4orf48-201ENST00000409248 ARPC4-TTLL3A0A0A6YYG9 625 aa18.15■□□□□ 0.5
C4orf48-201ENST00000409248 DPRXA6NFQ7 191 aa18.15■□□□□ 0.5
C4orf48-201ENST00000409248 HS3ST1O14792 307 aa18.15■□□□□ 0.5
C4orf48-201ENST00000409248 SURF4O15260 269 aa18.15■□□□□ 0.5
C4orf48-201ENST00000409248 ATE1O95260 518 aa18.15■□□□□ 0.5
C4orf48-201ENST00000409248 SLC2A10O95528 541 aa18.15■□□□□ 0.5
C4orf48-201ENST00000409248 PAICSP22234 425 aaKnown RBP18.15■□□□□ 0.5
C4orf48-201ENST00000409248 CRABP1P29762 137 aa18.15■□□□□ 0.5
C4orf48-201ENST00000409248 ZNF133P52736 654 aaPredicted RBP18.15■□□□□ 0.5
C4orf48-201ENST00000409248 SNAPC1Q16533 368 aa18.15■□□□□ 0.5
C4orf48-201ENST00000409248 C10orf128Q5T292 105 aa18.15■□□□□ 0.5
C4orf48-201ENST00000409248 C12orf73Q69YU5 71 aa18.15■□□□□ 0.5
C4orf48-201ENST00000409248 NPEPL1Q8NDH3 523 aa18.15■□□□□ 0.5
C4orf48-201ENST00000409248 NSMAFQ92636 917 aa18.15■□□□□ 0.5
C4orf48-201ENST00000409248 MBD6Q96DN6 1003 aa18.15■□□□□ 0.5
C4orf48-201ENST00000409248 RADILQ96JH8 1075 aa18.15■□□□□ 0.5
C4orf48-201ENST00000409248 GRIP2Q9C0E4 1043 aa18.15■□□□□ 0.5
C4orf48-201ENST00000409248 ALPK2Q86TB3 2170 aa18.15■□□□□ 0.5
C4orf48-201ENST00000409248 CCDC168Q8NDH2 2452 aa18.15■□□□□ 0.5
C4orf48-201ENST00000409248 M0R1B8 84 aa18.14■□□□□ 0.49
C4orf48-201ENST00000409248 ABCD4O14678 606 aa18.14■□□□□ 0.49
C4orf48-201ENST00000409248 SLC16A7O60669 478 aa18.14■□□□□ 0.49
C4orf48-201ENST00000409248 KHDRBS3O75525 346 aaKnown RBP18.14■□□□□ 0.49
C4orf48-201ENST00000409248 PLAUP00749 431 aa18.14■□□□□ 0.49
C4orf48-201ENST00000409248 PTDSS1P48651 473 aaKnown RBP18.14■□□□□ 0.49
C4orf48-201ENST00000409248 CDC42P60953 191 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms