RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 NHLRC1Q6VVB1 395 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 H1FNTQ75WM6 255 aaPredicted RBP10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 PIWIL3Q7Z3Z3 882 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 SNX32Q86XE0 403 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 OR6N1Q8NGY5 312 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 GEMIN6Q8WXD5 167 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 UPRTQ96BW1 309 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 TXNDC15Q96J42 360 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 OR52B2Q96RD2 323 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 DIRC2Q96SL1 478 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 CHIAQ9BZP6 476 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 MARCH7Q9H992 704 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 EGFL7Q9UHF1 273 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 IGKV1D-42A0A075B6H8 117 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 ZSCAN5BA6NJL1 495 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 F5H0A9 414 aaPredicted RBP10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 C3orf80F5H4A9 247 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 OR2T1O43869 369 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 PPIAL4GP0DN37 164 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 HOXC5Q00444 222 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 HLXQ14774 488 aaPredicted RBP10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 MOGQ16653 247 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 SPANXN4Q5MJ08 99 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 SWT1Q5T5J6 900 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 SLC22A24Q8N4F4 322 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 KLHL36Q8N4N3 616 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 SPICQ8N5J4 248 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 FAM110DQ8TAY7 271 aaPredicted RBP10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 IPCEF1Q8WWN9 437 aaPredicted RBP10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 SLC38A4Q969I6 547 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 TESCQ96BS2 214 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 PRDM13Q9H4Q3 707 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 MEAF6Q9HAF1 191 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 RNPEPL1Q9HAU8 725 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 RNF114Q9Y508 228 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 GPR45Q9Y5Y3 372 aa10.81□□□□□ -0.68
CHRNA1-203ENST00000409219 A0A087WUJ7 227 aa10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 E9PBE3 544 aa10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 SDHDO14521 159 aa10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 SBK2P0C263 348 aa10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 COX4I1P13073 169 aa10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 EPHA3P29320 983 aa10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 MPV17P39210 176 aa10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 CSNK1A1P48729 337 aa10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 ANXA11P50995 505 aaKnown RBP10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 PAX2Q02962 417 aa10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 TBC1D28Q2M2D7 210 aa10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 TMEM155Q4W5P6 130 aa10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 C5orf46Q6UWT4 87 aa10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 BRD3OSQ6XYD6 125 aa10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 WDR88Q6ZMY6 472 aa10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 MIER2Q8N344 545 aa10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 CPEB3Q8NE35 698 aaKnown RBP10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 VPS37AQ8NEZ2 397 aa10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 OR1J1Q8NGS3 322 aa10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 SLC41A3Q96GZ6 507 aa10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 CCDC115Q96NT0 180 aa10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 DCLRE1CQ96SD1 692 aaKnown RBP10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 SH3GL3Q99963 347 aa10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 NUF2Q9BZD4 464 aa10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 C1orf198Q9H425 327 aa10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 WDR55Q9H6Y2 383 aaPredicted RBP10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 DCLRE1BQ9H816 532 aa10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 OR5V1Q9UGF6 321 aa10.8□□□□□ -0.68
CHRNA1-203ENST00000409219 PLXNB1O43157 2135 aa10.79□□□□□ -0.68
CHRNA1-203ENST00000409219 TRAV36DV7A0A075B6V5 113 aa10.79□□□□□ -0.68
CHRNA1-203ENST00000409219 CLPXO76031 633 aa10.79□□□□□ -0.68
CHRNA1-203ENST00000409219 BCHEP06276 602 aa10.79□□□□□ -0.68
CHRNA1-203ENST00000409219 ADH4P08319 380 aa10.79□□□□□ -0.68
CHRNA1-203ENST00000409219 CDKN2CP42773 168 aa10.79□□□□□ -0.68
CHRNA1-203ENST00000409219 PROK1P58294 105 aa10.79□□□□□ -0.68
CHRNA1-203ENST00000409219 TXNL4AP83876 142 aaKnown RBP10.79□□□□□ -0.68
CHRNA1-203ENST00000409219 PDCD1Q15116 288 aa10.79□□□□□ -0.68
CHRNA1-203ENST00000409219 SMU1Q2TAY7 513 aa10.79□□□□□ -0.68
CHRNA1-203ENST00000409219 ESCO2Q56NI9 601 aa10.79□□□□□ -0.68
CHRNA1-203ENST00000409219 RPS26P11Q5JNZ5 115 aaPredicted RBP10.79□□□□□ -0.68
CHRNA1-203ENST00000409219 SPATA46Q5T0L3 261 aa10.79□□□□□ -0.68
CHRNA1-203ENST00000409219 KPRPQ5T749 579 aaPredicted RBP10.79□□□□□ -0.68
CHRNA1-203ENST00000409219 NET1Q7Z628 596 aaPredicted RBP10.79□□□□□ -0.68
CHRNA1-203ENST00000409219 LINC01006Q8NI28 216 aa10.79□□□□□ -0.68
CHRNA1-203ENST00000409219 RP9Q8TA86 221 aaKnown RBP10.79□□□□□ -0.68
CHRNA1-203ENST00000409219 SPATA9Q9BWV2 254 aa10.79□□□□□ -0.68
CHRNA1-203ENST00000409219 EGLN1Q9GZT9 426 aa10.79□□□□□ -0.68
CHRNA1-203ENST00000409219 SLC6A13Q9NSD5 602 aa10.79□□□□□ -0.68
CHRNA1-203ENST00000409219 TMEM38BQ9NVV0 291 aa10.79□□□□□ -0.68
CHRNA1-203ENST00000409219 ASH2LQ9UBL3 628 aa10.79□□□□□ -0.68
CHRNA1-203ENST00000409219 PLSCR5A0PG75 271 aa10.78□□□□□ -0.68
CHRNA1-203ENST00000409219 CCDC154A6NI56 674 aa10.78□□□□□ -0.68
CHRNA1-203ENST00000409219 ZNF726A6NNF4 738 aa10.78□□□□□ -0.68
CHRNA1-203ENST00000409219 ENTPD5O75356 428 aa10.78□□□□□ -0.68
CHRNA1-203ENST00000409219 SERPINI2O75830 405 aa10.78□□□□□ -0.68
CHRNA1-203ENST00000409219 PUDPQ08623 228 aa10.78□□□□□ -0.68
CHRNA1-203ENST00000409219 LARS2Q15031 903 aaKnown RBP10.78□□□□□ -0.68
CHRNA1-203ENST00000409219 ZMYND11Q15326 602 aa10.78□□□□□ -0.68
CHRNA1-203ENST00000409219 DPY19L1Q2PZI1 675 aa10.78□□□□□ -0.68
CHRNA1-203ENST00000409219 SAMD5Q5TGI4 173 aa10.78□□□□□ -0.68
CHRNA1-203ENST00000409219 FAM205BPQ63HN1 556 aa10.78□□□□□ -0.68
CHRNA1-203ENST00000409219 PGM2L1Q6PCE3 622 aa10.78□□□□□ -0.68
CHRNA1-203ENST00000409219 ZNF101Q8IZC7 436 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms