RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 TMEM239Q8WW34 195 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 ZNRF4Q8WWF5 429 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 RELTQ969Z4 430 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 ALG14Q96F25 216 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 Q96M85 177 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 SLC6A7Q99884 636 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 SLC17A9Q9BYT1 436 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 METTL9Q9H1A3 318 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 PTGES2Q9H7Z7 377 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 TRPV2Q9Y5S1 764 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 TVP23AA6NH52 213 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 MARCH11A6NNE9 402 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 VNN2O95498 520 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 LRG1P02750 347 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 C8orf89P0DMQ9 161 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 EDN3P14138 238 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 PAX1P15863 534 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 HLA-GP17693 338 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 RAB6AP20340 208 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 NTSP30990 170 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 SERPINF1P36955 418 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 IL13RA1P78552 427 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 TNFRSF9Q07011 255 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 OR4C11Q6IEV9 310 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 TAF8Q7Z7C8 310 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 GKN2Q86XP6 184 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 PNLDC1Q8NA58 520 aaKnown RBP11.61□□□□□ -0.55
HERC3-203ENST00000407637 ACBD4Q8NC06 268 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 SEMA6DQ8NFY4 1073 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 OR4K13Q8NH42 304 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 GPR148Q8TDV2 347 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 SLC25A43Q8WUT9 341 aaPredicted RBP11.61□□□□□ -0.55
HERC3-203ENST00000407637 MITD1Q8WV92 249 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 UBE2E3Q969T4 207 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 GAL3ST3Q96A11 431 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 LMAN1LQ9HAT1 526 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 PLAGL1Q9UM63 463 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 MRPS33Q9Y291 106 aaKnown RBP11.61□□□□□ -0.55
HERC3-203ENST00000407637 ZNF443Q9Y2A4 671 aaPredicted RBP11.61□□□□□ -0.55
HERC3-203ENST00000407637 SLC45A1Q9Y2W3 748 aa11.61□□□□□ -0.55
HERC3-203ENST00000407637 CENPVL1A0A0U1RR11 272 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 A0A1B0GVT2 93 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 FEZF1A0PJY2 475 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 SEC14L6B5MCN3 397 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 FKTNO75072 461 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 PLGP00747 810 aaPredicted RBP11.6□□□□□ -0.55
HERC3-203ENST00000407637 SFTPBP07988 381 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 FBXO45P0C2W1 286 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 SLC2A1P11166 492 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 C6P13671 934 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 ELNP15502 786 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 CD52P31358 61 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 RPS23P62266 143 aaKnown RBP11.6□□□□□ -0.55
HERC3-203ENST00000407637 HSD11B2P80365 405 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 NHLH2Q02577 135 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 TDGQ13569 410 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 SLC9A5Q14940 896 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 Q499Y3 187 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 GDF6Q6KF10 455 aaPredicted RBP11.6□□□□□ -0.55
HERC3-203ENST00000407637 CCDC116Q8IYX3 515 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 TMEM229BQ8NBD8 167 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 BPIFA2Q96DR5 249 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 ADAM2Q99965 735 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 MS4A8Q9BY19 250 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 PARP12Q9H0J9 701 aaKnown RBP11.6□□□□□ -0.55
HERC3-203ENST00000407637 SYT4Q9H2B2 425 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 DUSP22Q9NRW4 184 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 USP36Q9P275 1121 aaKnown RBP11.6□□□□□ -0.55
HERC3-203ENST00000407637 DNAJB11Q9UBS4 358 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 ICAM5Q9UMF0 924 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 AMDHD2Q9Y303 409 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 HDGFL3Q9Y3E1 203 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 TRBV6-7A0A0A0MS04 114 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.6□□□□□ -0.55
HERC3-203ENST00000407637 SLC38A8A6NNN8 435 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 BRINP1O60477 761 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 OR2C1O95371 312 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 FABP4P15090 132 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 MAPK8P45983 427 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 OR1G1P47890 313 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 SLC6A9P48067 706 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 MLC1Q15049 377 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 ARHGAP40Q5TG30 622 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 RPL7L1Q6DKI1 246 aaKnown RBP11.6□□□□□ -0.55
HERC3-203ENST00000407637 HIST2H3AQ71DI3 136 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 TMEM150AQ86TG1 271 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 SLC25A42Q86VD7 318 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 HIST3H2BBQ8N257 126 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 OR9A2Q8NGT5 310 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 PLD4Q96BZ4 506 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 SEH1LQ96EE3 360 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 NRTNQ99748 197 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 BCO1Q9HAY6 547 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 SIRT7Q9NRC8 400 aa11.6□□□□□ -0.55
HERC3-203ENST00000407637 UMAD1C9J7I0 102 aa11.59□□□□□ -0.55
HERC3-203ENST00000407637 SOX15O60248 233 aa11.59□□□□□ -0.55
HERC3-203ENST00000407637 SRPX2O60687 465 aaPredicted RBP11.59□□□□□ -0.55
HERC3-203ENST00000407637 DPEP1P16444 411 aa11.59□□□□□ -0.55
HERC3-203ENST00000407637 ZNF136P52737 540 aa11.59□□□□□ -0.55
HERC3-203ENST00000407637 EIF2B1Q14232 305 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms