RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 CELF2-AS1Q8N7Q2 184 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 SAMD12Q8N8I0 201 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 ZNF441Q8N8Z8 693 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 OR5J2Q8NH18 312 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 OR8K3Q8NH51 312 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 NUBPLQ8TB37 319 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 TRMT10AQ8TBZ6 339 aaKnown RBP11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 RPS4Y2Q8TD47 263 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 ST8SIA1Q92185 356 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 RASD2Q96D21 266 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 Q96M85 177 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 OR2B2Q9GZK3 357 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 COMMD4Q9H0A8 199 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 ZNF700Q9H0M5 742 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 C11orf54Q9H0W9 315 aaPredicted RBP11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 WDR76Q9H967 626 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 INIPQ9NRY2 104 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 TAS2R10Q9NYW0 307 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 COPZ2Q9P299 210 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 LAMP5Q9UJQ1 280 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 FBXL4Q9UKA2 621 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 SPATA2Q9UM82 520 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 RASD1Q9Y272 281 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 ADAM18Q9Y3Q7 739 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 FKBP7Q9Y680 259 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 APCP25054 2843 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 IGHV1-45A0A0A0MS14 117 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 NSG1A0A0A6YYJ2 146 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 A0A1W2PRG6 482 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 E9PI62 339 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 FZD7O75084 574 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 NCR1O76036 304 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 UBL3O95164 117 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 BGLAPP02818 100 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 RAF1P04049 648 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 COX6A1P12074 109 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 PRKCAP17252 672 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 ELK1P19419 428 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 ABCD3P28288 659 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 CDKN2AP42771 156 aaKnown RBP11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 PER3P56645 1201 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 SCAND1P57086 179 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 BTG1P62324 171 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 RPL18Q07020 188 aaKnown RBP11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 RASGEF1BQ0VAM2 473 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 PCOLCEQ15113 449 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 FAM69AQ5T7M9 428 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 FAM205BPQ63HN1 556 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 DNM1P34Q6PK57 102 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 YIPF7Q8N8F6 280 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 CREB3L1Q96BA8 519 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 FER1L6-AS2Q96M78 137 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 DCLRE1CQ96SD1 692 aaKnown RBP11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 LPAR4Q99677 370 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 ZNF160Q9HCG1 818 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 CAMK2AQ9UQM7 478 aa11.59□□□□□ -0.55
SMARCB1-203ENST00000407082 TMED7-TICAM2A0A0A6YYA0 188 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 LINC00854A0A1B0GVQ3 168 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 A0A1W2PQ72 361 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 SHISA3A0PJX4 238 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 SMIM30A4D0T7 59 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 A6NIZ1 184 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 B4DXG7 233 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 MASP2O00187 686 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 CTDSPLO15194 276 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 PLA2G10O15496 165 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 SULT1B1O43704 296 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 FADS1O60427 444 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 DHFRP00374 187 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 HPP00738 406 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 IGHMP01871 453 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 SRMP19623 302 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 CRABP1P29762 137 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 EVI2BP34910 448 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 APOBEC1P41238 236 aaKnown RBP11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 RRADP55042 308 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 RAP1BP61224 184 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 RPL27P61353 136 aaKnown RBP11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 RAP1AP62834 184 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 RNF4P78317 190 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 MRPS10P82664 201 aaKnown RBP11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 ALKBH1Q13686 389 aaKnown RBP11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 UBE2NLQ5JXB2 153 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 DCAF10Q5QP82 559 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 LINC01590Q5TEZ4 76 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 EEF1A1P5Q5VTE0 462 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 TIGD3Q6B0B8 471 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 PAPD4Q6PIY7 484 aaKnown RBP11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 CBLN3Q6UW01 205 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 LRRN1Q6UXK5 716 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 APOOLQ6UXV4 268 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 MARCH3Q86UD3 253 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 CDC20BQ86Y33 519 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 ZNF321PQ8N8H1 164 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 CLEC1AQ8NC01 280 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 ZNF671Q8TAW3 534 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 TAAR8Q969N4 342 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 NEDD4LQ96PU5 975 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 INTS14Q96SY0 518 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 WDR77Q9BQA1 342 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms