RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 ABHD6Q9BV23 337 aa15.14■□□□□ 0.01
NUP50-203ENST00000407019 WNT16Q9UBV4 365 aa15.14■□□□□ 0.01
NUP50-203ENST00000407019 SLC23A1Q9UHI7 598 aa15.14■□□□□ 0.01
NUP50-203ENST00000407019 IGLV3-12A0A075B6K2 115 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 A6NIZ1 184 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 TOX3O15405 576 aaPredicted RBP15.13■□□□□ 0.01
NUP50-203ENST00000407019 PNPP00491 289 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 HLA-DOBP13765 273 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 IL11P20809 199 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 DCTDP32321 178 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 SUMO3P55854 103 aaPredicted RBP15.13■□□□□ 0.01
NUP50-203ENST00000407019 RAP1BP61224 184 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 RAP1AP62834 184 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 MFGE8Q08431 387 aaPredicted RBP15.13■□□□□ 0.01
NUP50-203ENST00000407019 PUDPQ08623 228 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 C17orf67Q0P5P2 114 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 OR7E24Q6IFN5 339 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 TMEM71Q6P5X7 295 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 PIAS4Q8N2W9 510 aaPredicted RBP15.13■□□□□ 0.01
NUP50-203ENST00000407019 NFAM1Q8NET5 270 aaPredicted RBP15.13■□□□□ 0.01
NUP50-203ENST00000407019 OR11H4Q8NGC9 324 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 OR52N5Q8NH56 324 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 DUSP15Q9H1R2 295 aaPredicted RBP15.13■□□□□ 0.01
NUP50-203ENST00000407019 DLL4Q9NR61 685 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 CDV3Q9UKY7 258 aaKnown RBP15.13■□□□□ 0.01
NUP50-203ENST00000407019 DHDHQ9UQ10 334 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 COA3Q9Y2R0 106 aaPredicted RBP15.13■□□□□ 0.01
NUP50-203ENST00000407019 FER1L5A0AVI2 2057 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 TRIOO75962 3097 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 TTLL8A6PVC2 850 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 RAD1O60671 282 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 ZP1P60852 638 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 ACY1Q03154 408 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 SHBQ15464 509 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 RAB11BQ15907 218 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 ANKRD16Q6P6B7 361 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 NDUFAF7Q7L592 441 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 OR51D1Q8NGF3 324 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 THAP3Q8WTV1 239 aaPredicted RBP15.13■□□□□ 0.01
NUP50-203ENST00000407019 NOX3Q9HBY0 568 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 SCP2D1Q9UJQ7 156 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 FBXL3Q9UKT7 428 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 ATXN7L1Q9ULK2 861 aaPredicted RBP15.13■□□□□ 0.01
NUP50-203ENST00000407019 LRP12Q9Y561 859 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 NPTNQ9Y639 398 aa15.13■□□□□ 0.01
NUP50-203ENST00000407019 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 C2orf72A6NCS6 295 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 ZNF354AO60765 605 aaPredicted RBP15.12■□□□□ 0.01
NUP50-203ENST00000407019 CTAG2O75638 210 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 WNT11O96014 354 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 POU3F4P49335 361 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 ARRB1P49407 418 aaPredicted RBP15.12■□□□□ 0.01
NUP50-203ENST00000407019 ZP4Q12836 540 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 MFSD13AQ14CX5 517 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 LINC00303Q3SY05 128 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 FAAP20Q6NZ36 180 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 MAMSTRQ6ZN01 415 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 TMPRSS9Q7Z410 1059 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 CATSPERDQ86XM0 798 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 KDM8Q8N371 416 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 MFSD8Q8NHS3 518 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 NUBPLQ8TB37 319 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 ASB10Q8WXI3 467 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 PPP1R14AQ96A00 147 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 NPAS1Q99742 590 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 ZNF436Q9C0F3 470 aaPredicted RBP15.12■□□□□ 0.01
NUP50-203ENST00000407019 DIABLOQ9NR28 239 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 SUSD2Q9UGT4 822 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 GGT3PA6NGU5 568 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 NPIPA5E9PKD4 350 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 MS4A18H0YCH9 400 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 SLC17A2O00624 439 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 ALOX12BO75342 701 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 RBBP9O75884 186 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 ALDOBP05062 364 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 ITGA5P08648 1049 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 DNASE1P24855 282 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 FAUP35544 74 aaKnown RBP15.12■□□□□ 0.01
NUP50-203ENST00000407019 APOBEC1P41238 236 aaKnown RBP15.12■□□□□ 0.01
NUP50-203ENST00000407019 DAP3P51398 398 aaKnown RBP15.12■□□□□ 0.01
NUP50-203ENST00000407019 CAMK2DQ13557 499 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 OR7A5Q15622 319 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 MS4A18Q3C1V0 323 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 NKAIN1Q4KMZ8 207 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 THOC7Q6I9Y2 204 aaKnown RBP15.12■□□□□ 0.01
NUP50-203ENST00000407019 SLC25A25Q6KCM7 469 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 DNM1P34Q6PK57 102 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 ZNF574Q6ZN55 896 aaPredicted RBP15.12■□□□□ 0.01
NUP50-203ENST00000407019 Q6ZTK2 550 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 MDGA2Q7Z553 956 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 PMEPA1Q969W9 287 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 MESP1Q9BRJ9 268 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 NPIPA1Q9UND3 350 aa15.12■□□□□ 0.01
NUP50-203ENST00000407019 LOC100289279A0A1B0GTE1 492 aa15.11■□□□□ 0.01
NUP50-203ENST00000407019 H7C417 338 aa15.11■□□□□ 0.01
NUP50-203ENST00000407019 NDUFB6O95139 128 aa15.11■□□□□ 0.01
NUP50-203ENST00000407019 MPZL1O95297 269 aa15.11■□□□□ 0.01
NUP50-203ENST00000407019 CD2P06729 351 aa15.11■□□□□ 0.01
NUP50-203ENST00000407019 TPOP07202 933 aa15.11■□□□□ 0.01
NUP50-203ENST00000407019 FBXO45P0C2W1 286 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms