RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 FZD7O75084 574 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 KHDRBS3O75525 346 aaKnown RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 KRT33AO76009 404 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 RPP14O95059 124 aaKnown RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 LALBAP00709 142 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 ZNF823P16415 610 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 CELP19835 753 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 NTF4P34130 210 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 GUCA1AP43080 201 aaPredicted RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 ZNF85Q03923 595 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 GGTLC2Q14390 218 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 POU4F3Q15319 338 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 CNPY1Q3B7I2 92 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 LRFN4Q6PJG9 635 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 CORO6Q6QEF8 472 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 RPTNQ6XPR3 784 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 SLC16A9Q7RTY1 509 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 P4HA3Q7Z4N8 544 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 ZGRF1Q86YA3 2104 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 LINC00346Q8IVM7 164 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 TIGD4Q8IY51 512 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 RPL3LQ92901 407 aaKnown RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 C12orf43Q96C57 262 aaKnown RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 OPALINQ96PE5 141 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 ALKBH3Q96Q83 286 aaPredicted RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 OR2M2Q96R28 347 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 ZNF649Q9BS31 505 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 SF3B5Q9BWJ5 86 aaKnown RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 RBM38Q9H0Z9 239 aaKnown RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 EMC7Q9NPA0 242 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 MRPL22Q9NWU5 206 aaKnown RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 KLHL9Q9P2J3 617 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 KLHDC2Q9Y2U9 406 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 NOSIPQ9Y314 301 aaKnown RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 SLC22A20A6NK97 555 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 ZNF670-ZNF695F2Z2N8 137 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 CCRL2O00421 344 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 AKAP8O43823 692 aaKnown RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 AIREO43918 545 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 MRPL33O75394 65 aaKnown RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 TGM6O95932 706 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 MT-ND5P03915 603 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 SCG5P05408 212 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 GADD45AP24522 165 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 PSMB10P40306 273 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 VBP1P61758 197 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 HSF2Q03933 536 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 BCL2A1Q16548 175 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 SGCAQ16586 387 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 SOWAHCQ53LP3 525 aaPredicted RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 PHYHD1Q5SRE7 291 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 RNLSQ5VYX0 342 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 ZNF585AQ6P3V2 769 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 FAM180AQ6UWF9 173 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 GLB1L2Q8IW92 636 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 CISD2Q8N5K1 135 aaKnown RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 OR10H5Q8NGA6 315 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 UFD1Q92890 307 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 PNPLA2Q96AD5 504 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 SNX18Q96RF0 628 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 TRIB1Q96RU8 372 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 CHCHD6Q9BRQ6 235 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 TMED9Q9BVK6 235 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 ULBP2Q9BZM5 246 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 YIPF3Q9GZM5 350 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 OR51E2Q9H255 320 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 CRLF2Q9HC73 371 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 INPP5EQ9NRR6 644 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 ACOXLQ9NUZ1 547 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 PAQR5Q9NXK6 330 aaPredicted RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 BABAM2Q9NXR7 383 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 CAB39Q9Y376 341 aaPredicted RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 GRIP1Q9Y3R0 1128 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 E9PI62 339 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 H3BMQ9 156 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 SLC43A1O75387 559 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 UPK3AO75631 287 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 ZNF432O94892 652 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 IGHG3P01860 377 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 OR8G3PP0DMU2 310 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 PSKH1P11801 424 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 CPN1P15169 458 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 LAP3P28838 519 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 TGFBR1P36897 503 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 TGFBR2P37173 567 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 ENTPD1P49961 510 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 BLVRAP53004 296 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 ACTA2P62736 377 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 ACTG2P63267 376 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 MLLT11Q13015 90 aaPredicted RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 EIF2B1Q14232 305 aaKnown RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 SSX1Q16384 188 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 C9orf135Q5VTT2 229 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 ABLIM2Q6H8Q1 611 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 ARL9Q6T311 187 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 LRRN1Q6UXK5 716 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 SIAH3Q8IW03 269 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 PHC2Q8IXK0 858 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 GCNT2Q8N0V5 402 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 TMEM123Q8N131 208 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms