RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 TOXO94900 526 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 GPANK1O95872 356 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 IGHV3-9P01782 118 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 CD53P19397 219 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 CCL11P51671 97 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 PSMA6P60900 246 aaKnown RBP12.68□□□□□ -0.38
SCAF4-202ENST00000399804 SLC16A14Q7RTX9 510 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 RASL10BQ96S79 203 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 COPZ2Q9P299 210 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 EXOGQ9Y2C4 368 aaKnown RBP12.68□□□□□ -0.38
SCAF4-202ENST00000399804 HIF3AQ9Y2N7 669 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 C5orf51A6NDU8 294 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 ZIC2O95409 532 aaPredicted RBP12.68□□□□□ -0.38
SCAF4-202ENST00000399804 MT-CO3P00414 261 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 APEHP13798 732 aaKnown RBP12.68□□□□□ -0.38
SCAF4-202ENST00000399804 ACTBP60709 375 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 ACTG1P63261 375 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 AGAP6Q5VW22 663 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 FGGYQ96C11 551 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 ARL5BQ96KC2 179 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 AGAP4Q96P64 663 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 ZPBPQ9BS86 351 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 SLCO1C1Q9NYB5 712 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 RCE1Q9Y256 329 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 CCDC187A0A096LP49 1063 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 A0A0B4J203 849 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 CRTAPO75718 401 aaPredicted RBP12.68□□□□□ -0.38
SCAF4-202ENST00000399804 MT-ND4P03905 459 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 NPR2P20594 1047 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 ARPC4P59998 168 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 OR2G2Q8NGZ5 317 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 FBLIM1Q8WUP2 373 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 CREB3L1Q96BA8 519 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 OR10A2Q9H208 303 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 CALHM2Q9HA72 323 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 ICAM5Q9UMF0 924 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 UBL3O95164 117 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 VAMP5O95183 116 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 AMY2AP04746 511 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 PNLIPP16233 465 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 AP2S1P53680 142 aaPredicted RBP12.67□□□□□ -0.38
SCAF4-202ENST00000399804 RRADP55042 308 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 FXYD6P3P58550 94 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 IRF3Q14653 427 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 NKPD1Q17RQ9 610 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 SLC25A30Q5SVS4 291 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 ZSCAN1Q8NBB4 408 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 OR2Y1Q8NGV0 311 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 FAM131CQ96AQ9 280 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 CST11Q9H112 138 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 MN1Q10571 1320 aaPredicted RBP12.67□□□□□ -0.38
SCAF4-202ENST00000399804 ARGFXA6NJG6 315 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 CXCL13O43927 109 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 FGF9P31371 208 aaPredicted RBP12.67□□□□□ -0.38
SCAF4-202ENST00000399804 MALLQ13021 153 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 TATDN3Q17R31 274 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 GLYATL3Q5SZD4 288 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 TMEM205Q6UW68 189 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 TMPPEQ6ZT21 453 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 ABHD6Q9BV23 337 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 RBFOX1Q9NWB1 397 aaKnown RBP12.67□□□□□ -0.38
SCAF4-202ENST00000399804 FKBP14Q9NWM8 211 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 NOSIPQ9Y314 301 aaKnown RBP12.67□□□□□ -0.38
SCAF4-202ENST00000399804 BOLA1Q9Y3E2 137 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 GGT3PA6NGU5 568 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 IMPA2O14732 288 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 CBR3O75828 277 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 EPPINO95925 133 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 POU3F3P20264 500 aaPredicted RBP12.67□□□□□ -0.38
SCAF4-202ENST00000399804 HTR5AP47898 357 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 MAP2K6P52564 334 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 SNU13P55769 128 aaKnown RBP12.67□□□□□ -0.38
SCAF4-202ENST00000399804 C17orf47Q8NEP4 570 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 TSPAN32Q96QS1 320 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 PCDHB16Q9NRJ7 776 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 EMC3Q9P0I2 261 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 RABL2AQ9UBK7 228 aaPredicted RBP12.67□□□□□ -0.38
SCAF4-202ENST00000399804 RABL2BQ9UNT1 228 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 CAMK2AQ9UQM7 478 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 UGT2A1Q9Y4X1 527 aa12.67□□□□□ -0.38
SCAF4-202ENST00000399804 SHISA7A6NL88 538 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 TPD52L2O43399 206 aaKnown RBP12.66□□□□□ -0.38
SCAF4-202ENST00000399804 UBE2NP61088 152 aaKnown RBP12.66□□□□□ -0.38
SCAF4-202ENST00000399804 FMODQ06828 376 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 ZNF362Q5T0B9 420 aaPredicted RBP12.66□□□□□ -0.38
SCAF4-202ENST00000399804 AGAP7PQ5VUJ5 663 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 PRSS45Q7RTY3 260 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 ZNF431Q8TF32 576 aaPredicted RBP12.66□□□□□ -0.38
SCAF4-202ENST00000399804 MED12Q93074 2177 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 OXGR1Q96P68 337 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 NEDD4LQ96PU5 975 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 SIGLEC11Q96RL6 698 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 SLC6A7Q99884 636 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 HDGFL3Q9Y3E1 203 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 TGFBR3LH3BV60 316 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 HTR2CP28335 458 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 S100GP29377 79 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 SLC25A1P53007 311 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 SLC17A1Q14916 467 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 UBE2NLQ5JXB2 153 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms