RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 SCAND1P57086 179 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 PRPS1P60891 318 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 SHHQ15465 462 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 ITPRIPL2Q3MIP1 535 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 PRAMEF17Q5VTA0 474 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 EXD3Q8N9H8 876 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 PAQR8Q8TEZ7 354 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 PMM1Q92871 262 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 MCHR2Q969V1 340 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 C3orf49Q96BT1 292 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 RBM18Q96H35 190 aaKnown RBP12.66□□□□□ -0.38
APOB-202ENST00000399256 LRIT1Q9P2V4 623 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 RANBP2P49792 3224 aaKnown RBP12.66□□□□□ -0.38
APOB-202ENST00000399256 IGKV1D-42A0A075B6H8 117 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 OR6C76A6NM76 312 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 F8W036 122 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 IGFALSP35858 605 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 BLOC1S1P78537 153 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 PRRT3Q5FWE3 981 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 TMEM71Q6P5X7 295 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 FIGLAQ6QHK4 219 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 UQCC3Q6UW78 93 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 ACOT7LQ6ZUV0 252 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 ZFP82Q8N141 532 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 BPIFB2Q8N4F0 458 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 MRPL43Q8N983 215 aaKnown RBP12.65□□□□□ -0.38
APOB-202ENST00000399256 ZBTB8AQ96BR9 441 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 CTHRC1Q96CG8 243 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 TMEM231Q9H6L2 316 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 LYRM4Q9HD34 91 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 TBC1D3IA0A087WXS9 549 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 H0YGG7 62 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 ZNF432O94892 652 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 CA3P07451 260 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 SLC25A4P12235 298 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 ARF3P61204 181 aaPredicted RBP12.65□□□□□ -0.38
APOB-202ENST00000399256 OR7A5Q15622 319 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 ZNHIT3Q15649 155 aaPredicted RBP12.65□□□□□ -0.38
APOB-202ENST00000399256 ALG10Q5BKT4 473 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 FAM122BQ7Z309 247 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 CCL4L1Q8NHW4 92 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 FLVCR1-AS1Q8TAF5 88 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 ANKRD9Q96BM1 317 aaPredicted RBP12.65□□□□□ -0.38
APOB-202ENST00000399256 PHYHIPLQ96FC7 376 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 SPACA7Q96KW9 195 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 CMSS1Q9BQ75 279 aaKnown RBP12.65□□□□□ -0.38
APOB-202ENST00000399256 SLC25A21Q9BQT8 299 aaPredicted RBP12.65□□□□□ -0.38
APOB-202ENST00000399256 SLC22A13Q9Y226 551 aa12.65□□□□□ -0.38
APOB-202ENST00000399256 YBX2Q9Y2T7 364 aaKnown RBP12.65□□□□□ -0.38
APOB-202ENST00000399256 SULT2B1O00204 365 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 SLC17A2O00624 439 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 PRKNO60260 465 aaPredicted RBP12.64□□□□□ -0.39
APOB-202ENST00000399256 ACTL6AO96019 429 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 CD14P08571 375 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 SLC25A1P53007 311 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 ENPP2Q13822 863 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 C3orf33Q6P1S2 294 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 CD163Q86VB7 1156 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 TMEM229BQ8NBD8 167 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 OR4S1Q8NGB4 309 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 OR4C3Q8NH37 302 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 EDAQ92838 391 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 C4orf45Q96LM5 186 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 SLC6A7Q99884 636 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 MSRAQ9UJ68 235 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 HEBP2Q9Y5Z4 205 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 NUP210LQ5VU65 1888 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 HEATR5AQ86XA9 2040 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 ISXQ2M1V0 245 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 ZNF528Q3MIS6 628 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 ASPHD2Q6ICH7 369 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 RHOUQ7L0Q8 258 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 CA13Q8N1Q1 262 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 RCBTB1Q8NDN9 531 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 OR13C8Q8NGS7 320 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 THAP6Q8TBB0 222 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 RERGQ96A58 199 aaPredicted RBP12.64□□□□□ -0.39
APOB-202ENST00000399256 ELF4Q99607 663 aaPredicted RBP12.64□□□□□ -0.39
APOB-202ENST00000399256 FANCFQ9NPI8 374 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 CTSFQ9UBX1 484 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 ZNF629Q9UEG4 869 aaPredicted RBP12.64□□□□□ -0.39
APOB-202ENST00000399256 CGGBP1Q9UFW8 167 aaPredicted RBP12.64□□□□□ -0.39
APOB-202ENST00000399256 KCNG2Q9UJ96 466 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 VSIG4Q9Y279 399 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 CEP290O15078 2479 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 A0A1W2PQU0 124 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 RAB19A4D1S5 217 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 ZNF736B4DX44 427 aaPredicted RBP12.64□□□□□ -0.39
APOB-202ENST00000399256 SLC31A1O15431 190 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 CYB5AP00167 134 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 DCNP07585 359 aaKnown RBP12.64□□□□□ -0.39
APOB-202ENST00000399256 ZNF735P0CB33 412 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 ALOX5APP20292 161 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 AVPR2P30518 371 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 SDHAP31040 664 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 KCNJ3P48549 501 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 CCR4P51679 360 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 GPR85P60893 370 aa12.64□□□□□ -0.39
APOB-202ENST00000399256 PLEKHN1Q494U1 663 aaPredicted RBP12.64□□□□□ -0.39
APOB-202ENST00000399256 OR10K2Q6IF99 312 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms