RNA–Protein interactions for RNA: ENST00000398975.6

COL13A1-204, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 1,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-204ENST00000398975 NR4A1P22736 598 aa12.49□□□□□ -0.41
COL13A1-204ENST00000398975 FPR3P25089 353 aa12.49□□□□□ -0.41
COL13A1-204ENST00000398975 ZNF84P51523 738 aa12.49□□□□□ -0.41
COL13A1-204ENST00000398975 RAP1BP61224 184 aa12.49□□□□□ -0.41
COL13A1-204ENST00000398975 RAP1AP62834 184 aa12.49□□□□□ -0.41
COL13A1-204ENST00000398975 BNIP1Q12981 228 aa12.49□□□□□ -0.41
COL13A1-204ENST00000398975 KRR1Q13601 381 aaKnown RBP12.49□□□□□ -0.41
COL13A1-204ENST00000398975 NRN1LQ496H8 165 aa12.49□□□□□ -0.41
COL13A1-204ENST00000398975 THEM4Q5T1C6 240 aa12.49□□□□□ -0.41
COL13A1-204ENST00000398975 OTPQ5XKR4 325 aa12.49□□□□□ -0.41
COL13A1-204ENST00000398975 KRT80Q6KB66 452 aa12.49□□□□□ -0.41
COL13A1-204ENST00000398975 C1orf94Q6P1W5 598 aa12.49□□□□□ -0.41
COL13A1-204ENST00000398975 SLC16A14Q7RTX9 510 aa12.49□□□□□ -0.41
COL13A1-204ENST00000398975 CPEB3Q8NE35 698 aaKnown RBP12.49□□□□□ -0.41
COL13A1-204ENST00000398975 OR4F15Q8NGB8 312 aa12.49□□□□□ -0.41
COL13A1-204ENST00000398975 NANOS1Q8WY41 292 aaKnown RBP12.49□□□□□ -0.41
COL13A1-204ENST00000398975 ZNF570Q96NI8 536 aa12.49□□□□□ -0.41
COL13A1-204ENST00000398975 FOXN4Q96NZ1 517 aa12.49□□□□□ -0.41
COL13A1-204ENST00000398975 KCNS3Q9BQ31 491 aa12.49□□□□□ -0.41
COL13A1-204ENST00000398975 MAGIXQ9H6Y5 334 aa12.49□□□□□ -0.41
COL13A1-204ENST00000398975 SIAEQ9HAT2 523 aa12.49□□□□□ -0.41
COL13A1-204ENST00000398975 GRHPRQ9UBQ7 328 aa12.49□□□□□ -0.41
COL13A1-204ENST00000398975 AURKCQ9UQB9 309 aa12.49□□□□□ -0.41
COL13A1-204ENST00000398975 IER3IP1Q9Y5U9 82 aa12.49□□□□□ -0.41
COL13A1-204ENST00000398975 SETD2Q9BYW2 2564 aaPredicted RBP12.48□□□□□ -0.41
COL13A1-204ENST00000398975 PRSS37A4D1T9 235 aa12.48□□□□□ -0.41
COL13A1-204ENST00000398975 H7C417 338 aa12.48□□□□□ -0.41
COL13A1-204ENST00000398975 SOCS2O14508 198 aa12.48□□□□□ -0.41
COL13A1-204ENST00000398975 GYG2O15488 501 aa12.48□□□□□ -0.41
COL13A1-204ENST00000398975 OR10H3O60404 316 aa12.48□□□□□ -0.41
COL13A1-204ENST00000398975 LY6HO94772 140 aa12.48□□□□□ -0.41
COL13A1-204ENST00000398975 PPP1R3DO95685 299 aa12.48□□□□□ -0.41
COL13A1-204ENST00000398975 RAB36O95755 333 aa12.48□□□□□ -0.41
COL13A1-204ENST00000398975 TXNDC12O95881 172 aa12.48□□□□□ -0.41
COL13A1-204ENST00000398975 CTLA4P16410 223 aa12.48□□□□□ -0.41
COL13A1-204ENST00000398975 LAP3P28838 519 aa12.48□□□□□ -0.41
COL13A1-204ENST00000398975 SDHAP31040 664 aa12.48□□□□□ -0.41
COL13A1-204ENST00000398975 SERPINF1P36955 418 aa12.48□□□□□ -0.41
COL13A1-204ENST00000398975 CDKN2AP42771 156 aaKnown RBP12.48□□□□□ -0.41
COL13A1-204ENST00000398975 SNTB2Q13425 540 aaKnown RBP12.48□□□□□ -0.41
COL13A1-204ENST00000398975 TNK1Q13470 666 aa12.48□□□□□ -0.41
COL13A1-204ENST00000398975 ENDOGQ14249 297 aaKnown RBP12.48□□□□□ -0.41
COL13A1-204ENST00000398975 SGCAQ16586 387 aa12.48□□□□□ -0.41
COL13A1-204ENST00000398975 SMARCD3Q6STE5 483 aa12.48□□□□□ -0.41
COL13A1-204ENST00000398975 UGT2A3Q6UWM9 527 aa12.48□□□□□ -0.41
COL13A1-204ENST00000398975 TRMT61AQ96FX7 289 aaKnown RBP12.48□□□□□ -0.41
COL13A1-204ENST00000398975 COX4I2Q96KJ9 171 aa12.48□□□□□ -0.41
COL13A1-204ENST00000398975 SAMD8Q96LT4 415 aa12.48□□□□□ -0.41
COL13A1-204ENST00000398975 RBP7Q96R05 134 aa12.48□□□□□ -0.41
COL13A1-204ENST00000398975 CADM1Q9BY67 442 aaKnown RBP12.48□□□□□ -0.41
COL13A1-204ENST00000398975 OR52D1Q9H346 318 aa12.48□□□□□ -0.41
COL13A1-204ENST00000398975 DENND2DQ9H6A0 471 aaPredicted RBP12.48□□□□□ -0.41
COL13A1-204ENST00000398975 ZNF442Q9H7R0 627 aa12.48□□□□□ -0.41
COL13A1-204ENST00000398975 CR1P17927 2039 aa12.48□□□□□ -0.41
COL13A1-204ENST00000398975 NF1P21359 2839 aa12.47□□□□□ -0.41
COL13A1-204ENST00000398975 TNFRSF11BO00300 401 aa12.47□□□□□ -0.41
COL13A1-204ENST00000398975 DCTN6O00399 190 aa12.47□□□□□ -0.41
COL13A1-204ENST00000398975 KRT36O76013 467 aa12.47□□□□□ -0.41
COL13A1-204ENST00000398975 FARS2O95363 451 aaKnown RBP12.47□□□□□ -0.41
COL13A1-204ENST00000398975 ZNF32P17041 273 aa12.47□□□□□ -0.41
COL13A1-204ENST00000398975 APEX1P27695 318 aaKnown RBP12.47□□□□□ -0.41
COL13A1-204ENST00000398975 TRAP1Q12931 704 aaKnown RBP12.47□□□□□ -0.41
COL13A1-204ENST00000398975 DAG1Q14118 895 aa12.47□□□□□ -0.41
COL13A1-204ENST00000398975 EFNB3Q15768 340 aa12.47□□□□□ -0.41
COL13A1-204ENST00000398975 CLEC12BQ2HXU8 276 aa12.47□□□□□ -0.41
COL13A1-204ENST00000398975 RFX4Q33E94 735 aa12.47□□□□□ -0.41
COL13A1-204ENST00000398975 PABPC1L2AQ5JQF8 200 aa12.47□□□□□ -0.41
COL13A1-204ENST00000398975 FAM27BQ5VT28 67 aa12.47□□□□□ -0.41
COL13A1-204ENST00000398975 OR2T5Q6IEZ7 315 aa12.47□□□□□ -0.41
COL13A1-204ENST00000398975 DPY19L2P2Q6ZN68 376 aa12.47□□□□□ -0.41
COL13A1-204ENST00000398975 ZNF620Q6ZNG0 422 aa12.47□□□□□ -0.41
COL13A1-204ENST00000398975 IL17RDQ8NFM7 739 aa12.47□□□□□ -0.41
COL13A1-204ENST00000398975 OR2T29Q8NH02 315 aa12.47□□□□□ -0.41
COL13A1-204ENST00000398975 FANK1Q8TC84 345 aa12.47□□□□□ -0.41
COL13A1-204ENST00000398975 C18orf12Q96KH6 178 aa12.47□□□□□ -0.41
COL13A1-204ENST00000398975 SYT4Q9H2B2 425 aa12.47□□□□□ -0.41
COL13A1-204ENST00000398975 PLK3Q9H4B4 646 aa12.47□□□□□ -0.41
COL13A1-204ENST00000398975 EMC7Q9NPA0 242 aa12.47□□□□□ -0.41
COL13A1-204ENST00000398975 VSX1Q9NZR4 365 aaPredicted RBP12.47□□□□□ -0.41
COL13A1-204ENST00000398975 CHD3Q12873 2000 aaKnown RBP12.46□□□□□ -0.41
COL13A1-204ENST00000398975 A0A1W2PPL8 197 aa12.46□□□□□ -0.41
COL13A1-204ENST00000398975 SSX4O60224 188 aa12.46□□□□□ -0.41
COL13A1-204ENST00000398975 MPZL1O95297 269 aa12.46□□□□□ -0.41
COL13A1-204ENST00000398975 GASTP01350 101 aa12.46□□□□□ -0.41
COL13A1-204ENST00000398975 INHBBP09529 407 aa12.46□□□□□ -0.41
COL13A1-204ENST00000398975 FOSL1P15407 271 aa12.46□□□□□ -0.41
COL13A1-204ENST00000398975 NPR2P20594 1047 aa12.46□□□□□ -0.41
COL13A1-204ENST00000398975 ERFP50548 548 aa12.46□□□□□ -0.41
COL13A1-204ENST00000398975 PSG4Q00888 419 aa12.46□□□□□ -0.41
COL13A1-204ENST00000398975 CHRNB3Q05901 458 aa12.46□□□□□ -0.41
COL13A1-204ENST00000398975 TSPAN31Q12999 210 aa12.46□□□□□ -0.41
COL13A1-204ENST00000398975 SLC36A2Q495M3 483 aa12.46□□□□□ -0.41
COL13A1-204ENST00000398975 DNAL1Q4LDG9 190 aa12.46□□□□□ -0.41
COL13A1-204ENST00000398975 GPR139Q6DWJ6 353 aa12.46□□□□□ -0.41
COL13A1-204ENST00000398975 TMEM53Q6P2H8 277 aa12.46□□□□□ -0.41
COL13A1-204ENST00000398975 TMEM179BQ7Z7N9 219 aa12.46□□□□□ -0.41
COL13A1-204ENST00000398975 LRP11Q86VZ4 500 aa12.46□□□□□ -0.41
COL13A1-204ENST00000398975 ZCCHC24Q8N2G6 241 aaKnown RBP12.46□□□□□ -0.41
COL13A1-204ENST00000398975 SVOPLQ8N434 492 aa12.46□□□□□ -0.41
COL13A1-204ENST00000398975 SLC30A7Q8NEW0 376 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms