RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 WDR76Q9H967 626 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 PRR13Q9NZ81 148 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 MBD2Q9UBB5 411 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 DHCR7Q9UBM7 475 aaKnown RBP8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 CHRNA9Q9UGM1 479 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 MKL2Q9ULH7 1088 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 MDC1Q14676 2089 aaKnown RBP8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 HIDE1A8MVS5 230 aa8.96□□□□□ -0.98
PTCHD4-202ENST00000398738 SLC31A1O15431 190 aa8.96□□□□□ -0.98
PTCHD4-202ENST00000398738 TXNL1O43396 289 aa8.96□□□□□ -0.98
PTCHD4-202ENST00000398738 EIF3GO75821 320 aaKnown RBP eCLIP8.96□□□□□ -0.98
PTCHD4-202ENST00000398738 ST6GAL1P15907 406 aa8.96□□□□□ -0.98
PTCHD4-202ENST00000398738 EPCAMP16422 314 aa8.96□□□□□ -0.98
PTCHD4-202ENST00000398738 CMPK1P30085 196 aa8.96□□□□□ -0.98
PTCHD4-202ENST00000398738 PEBP1P30086 187 aaKnown RBP8.96□□□□□ -0.98
PTCHD4-202ENST00000398738 ALKBH1Q13686 389 aaKnown RBP8.96□□□□□ -0.98
PTCHD4-202ENST00000398738 UNQ9370/PRO34162Q6UXP9 181 aa8.96□□□□□ -0.98
PTCHD4-202ENST00000398738 VN1R4Q7Z5H5 301 aa8.96□□□□□ -0.98
PTCHD4-202ENST00000398738 BPIFB2Q8N4F0 458 aa8.96□□□□□ -0.98
PTCHD4-202ENST00000398738 POMGNT2Q8NAT1 580 aa8.96□□□□□ -0.98
PTCHD4-202ENST00000398738 CHST4Q8NCG5 386 aa8.96□□□□□ -0.98
PTCHD4-202ENST00000398738 SFT2D1Q8WV19 159 aa8.96□□□□□ -0.98
PTCHD4-202ENST00000398738 ZBTB8AQ96BR9 441 aa8.96□□□□□ -0.98
PTCHD4-202ENST00000398738 CMKLR1Q99788 373 aa8.96□□□□□ -0.98
PTCHD4-202ENST00000398738 PARP12Q9H0J9 701 aaKnown RBP8.96□□□□□ -0.98
PTCHD4-202ENST00000398738 MKKSQ9NPJ1 570 aaPredicted RBP8.96□□□□□ -0.98
PTCHD4-202ENST00000398738 HAO2Q9NYQ3 351 aa8.96□□□□□ -0.98
PTCHD4-202ENST00000398738 ZNF629Q9UEG4 869 aaPredicted RBP8.96□□□□□ -0.98
PTCHD4-202ENST00000398738 MRM2Q9UI43 246 aaKnown RBP8.96□□□□□ -0.98
PTCHD4-202ENST00000398738 RTTNQ86VV8 2226 aa8.96□□□□□ -0.98
PTCHD4-202ENST00000398738 A0A0A6YYC8 382 aaPredicted RBP8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 TMEM235A6NFC5 223 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 OTOL1A6NHN0 477 aaPredicted RBP8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 OR5K4A6NMS3 321 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 MPTX1A8MV57 137 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 I3L1I5 382 aaPredicted RBP8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 P2RX6O15547 441 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 OR10H2O60403 315 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 RNGTTO60942 597 aaKnown RBP8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 S100A6P06703 90 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 SLC35G6P0C7Q6 338 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 ERGP11308 486 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 ADH5P11766 374 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 PGAM2P15259 253 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 CXADRP78310 365 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 MRPS10P82664 201 aaKnown RBP8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 CDNFQ49AH0 187 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 MOB3CQ70IA8 216 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 JAGN1Q8N5M9 183 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 NUBPLQ8TB37 319 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 SLC2A12Q8TD20 617 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 SUSD6Q92537 303 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 FAM46BQ96A09 425 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 C10orf90Q96M02 699 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 SLC6A7Q99884 636 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 BARX1Q9HBU1 254 aaPredicted RBP8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 COA4Q9NYJ1 87 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 ZNF106Q9H2Y7 1883 aaKnown RBP8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 SDK1Q7Z5N4 2213 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 A0A0B4J2E0 115 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 A0A0D9SG52 128 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 A0A1B0GX12 115 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 FGF18O76093 207 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 CYB5AP00167 134 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 PLGP00747 810 aaPredicted RBP8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 CALCBP10092 127 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 CTXN1P60606 82 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 ADAM8P78325 824 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 ILF3Q12906 894 aaKnown RBP eCLIP8.95□□□□□ -0.982e-6■■■□□ 15.7
PTCHD4-202ENST00000398738 SLC22A6Q4U2R8 563 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 C11orf87Q6NUJ2 197 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 ENPP7Q6UWV6 458 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 EIF4E3Q8N5X7 224 aaKnown RBP8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 EID2Q8N6I1 236 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 ACBD4Q8NC06 268 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 CCDC107Q8WV48 283 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 FAM3DQ96BQ1 224 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 KXD1Q9BQD3 176 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 GAREM1Q9H706 876 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 DENND4CQ5VZ89 1909 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 C11orf98E9PRG8 122 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 ZNF749O43361 778 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 B3GALT2O43825 422 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 AGR2O95994 175 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 S100A9P06702 114 aaKnown RBP8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 TACSTD2P09758 323 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 AGTR1P30556 359 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 PTGFRP43088 359 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 AIMP2Q13155 320 aaKnown RBP8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 EXOSC6Q5RKV6 272 aaKnown RBP8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 OR52W1Q6IF63 320 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 OR52R1Q8NGF1 315 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 CD99L2Q8TCZ2 262 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 ROBO4Q8WZ75 1007 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 DCUN1D4Q92564 292 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 CMBLQ96DG6 245 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 MRPL48Q96GC5 212 aaKnown RBP8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 AMELYQ99218 206 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 COMMD4Q9H0A8 199 aa8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 PIGMQ9H3S5 423 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms