RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 ZNF432O94892 652 aa12.57□□□□□ -0.4
SKA1-202ENST00000398452 CDK1P06493 297 aa12.57□□□□□ -0.4
SKA1-202ENST00000398452 MRPL3P09001 348 aaKnown RBP12.57□□□□□ -0.4
SKA1-202ENST00000398452 SLC2A5P22732 501 aa12.57□□□□□ -0.4
SKA1-202ENST00000398452 LAP3P28838 519 aa12.57□□□□□ -0.4
SKA1-202ENST00000398452 TIMP3P35625 211 aa12.57□□□□□ -0.4
SKA1-202ENST00000398452 ADAM8P78325 824 aa12.57□□□□□ -0.4
SKA1-202ENST00000398452 SLC35A2P78381 396 aa12.57□□□□□ -0.4
SKA1-202ENST00000398452 RIPPLY2Q5TAB7 128 aa12.57□□□□□ -0.4
SKA1-202ENST00000398452 ZNF773Q6PK81 442 aa12.57□□□□□ -0.4
SKA1-202ENST00000398452 PRSS48Q7RTY5 328 aa12.57□□□□□ -0.4
SKA1-202ENST00000398452 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.57□□□□□ -0.4
SKA1-202ENST00000398452 DOLPP1Q86YN1 238 aa12.57□□□□□ -0.4
SKA1-202ENST00000398452 C9orf106Q8NAJ2 232 aa12.57□□□□□ -0.4
SKA1-202ENST00000398452 OR10H4Q8NGA5 316 aa12.57□□□□□ -0.4
SKA1-202ENST00000398452 OR6K3Q8NGY3 331 aa12.57□□□□□ -0.4
SKA1-202ENST00000398452 LGALS12Q96DT0 336 aa12.57□□□□□ -0.4
SKA1-202ENST00000398452 MNTQ99583 582 aa12.57□□□□□ -0.4
SKA1-202ENST00000398452 MRPS26Q9BYN8 205 aaKnown RBP12.57□□□□□ -0.4
SKA1-202ENST00000398452 DUSP21Q9H596 190 aa12.57□□□□□ -0.4
SKA1-202ENST00000398452 INPP5EQ9NRR6 644 aa12.57□□□□□ -0.4
SKA1-202ENST00000398452 PROCRQ9UNN8 238 aa12.57□□□□□ -0.4
SKA1-202ENST00000398452 EXOSC1Q9Y3B2 195 aaKnown RBP12.57□□□□□ -0.4
SKA1-202ENST00000398452 TMEM14AQ9Y6G1 99 aa12.57□□□□□ -0.4
SKA1-202ENST00000398452 COMMD3-BMI1R4GMX3 469 aa12.57□□□□□ -0.4
SKA1-202ENST00000398452 IGLV1-36A0A0B4J1U3 117 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 DAPL1A0PJW8 107 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 CCDC182A6NF36 153 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 TVP23AA6NH52 213 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 HSPB2A8KAH6 182 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 ZNF670-ZNF695F2Z2N8 137 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 PHYHO14832 338 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 FARS2O95363 451 aaKnown RBP12.56□□□□□ -0.4
SKA1-202ENST00000398452 STSP08842 583 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 SBK2P0C263 348 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 ATP6V1B1P15313 513 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 NPR2P20594 1047 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 NAA10P41227 235 aaPredicted RBP12.56□□□□□ -0.4
SKA1-202ENST00000398452 HSF2Q03933 536 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 GGTLC2Q14390 218 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 HSPB2Q16082 182 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 SGCAQ16586 387 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 HIST3H3Q16695 136 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 C10orf128Q5T292 105 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 LAIR2Q6ISS4 152 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 SLC25A47Q6Q0C1 308 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 SHFQ7M4L6 423 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 SLC16A9Q7RTY1 509 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 SLC35F2Q8IXU6 374 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 ACBD7Q8N6N7 88 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 OR52I1Q8NGK6 324 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 OR6N2Q8NGY6 317 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 OR2AJ1Q8NGZ0 328 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 ALKBH3Q96Q83 286 aaPredicted RBP12.56□□□□□ -0.4
SKA1-202ENST00000398452 CRLF2Q9HC73 371 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 MRPS18AQ9NVS2 196 aaKnown RBP12.56□□□□□ -0.4
SKA1-202ENST00000398452 ERVK-18Q9QC07 812 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 LAMP5Q9UJQ1 280 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 FOXD3Q9UJU5 478 aaPredicted RBP12.56□□□□□ -0.4
SKA1-202ENST00000398452 ING1Q9UK53 422 aaPredicted RBP12.56□□□□□ -0.4
SKA1-202ENST00000398452 DIMT1Q9UNQ2 313 aaKnown RBP12.56□□□□□ -0.4
SKA1-202ENST00000398452 EXOGQ9Y2C4 368 aaKnown RBP12.56□□□□□ -0.4
SKA1-202ENST00000398452 ZNF835Q9Y2P0 537 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 BSNQ9UPA5 3926 aa12.56□□□□□ -0.4
SKA1-202ENST00000398452 DCTN6O00399 190 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 UPK3AO75631 287 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 APOL3O95236 402 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 CLPTM1O96005 669 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 IGHV3-9P01782 118 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 HRGP04196 525 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 SPARCP09486 303 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 OR2T7P0C7T2 308 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 SLC15A1P46059 708 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 OR3A2P47893 321 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 ENTPD1P49961 510 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 CDH15P55291 814 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 TUBA4AP68366 448 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 ROR2Q01974 943 aaKnown RBP12.55□□□□□ -0.4
SKA1-202ENST00000398452 TGFBR3Q03167 851 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 MVKQ03426 396 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 STK11Q15831 433 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 TSPO2Q5TGU0 170 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 FBXW9Q5XUX1 488 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 TMEM154Q6P9G4 183 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 BRICD5Q6PL45 260 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 B3GLCTQ6Y288 498 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 TMPRSS11AQ6ZMR5 421 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 C3P1Q6ZMU1 363 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.55□□□□□ -0.4
SKA1-202ENST00000398452 NUFIP2Q7Z417 695 aaKnown RBP12.55□□□□□ -0.4
SKA1-202ENST00000398452 ZNF511Q8NB15 262 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 OR4F15Q8NGB8 312 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 OR2T27Q8NH04 317 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 TTYH2Q9BSA4 534 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 SFXN3Q9BWM7 321 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 YIPF3Q9GZM5 350 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 ADGRL4Q9HBW9 690 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 FGF20Q9NP95 211 aaPredicted RBP12.55□□□□□ -0.4
SKA1-202ENST00000398452 KCNG2Q9UJ96 466 aa12.55□□□□□ -0.4
SKA1-202ENST00000398452 TINAGQ9UJW2 476 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms